Coordinate-aware organelle record

Ocimum x africanum chloroplast genome

Available NC_082140.1 152,365 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	13	88	75
psbA	gene	photosystem-ii	−	384	1443	1059
trnK-UUU	gene	translation-rna	−	1674	4251	2577
matK	gene	other	−	1999	3520	1521
rps16	gene	ribosomal-protein	−	4803	5930	1127
trnQ-UUG	gene	translation-rna	−	6843	6915	72
psbK	gene	photosystem-ii	+	7295	7475	180
psbI	gene	photosystem-ii	+	7865	7976	111
trnS-GCU	gene	translation-rna	−	8137	8225	88
trnG-UCC	gene	translation-rna	+	8905	9665	760
trnR-UCU	gene	translation-rna	+	9851	9923	72
atpA	gene	atp-synthase	−	10026	11550	1524
atpF	gene	atp-synthase	−	11657	12897	1240
atpH	gene	atp-synthase	−	13185	13431	246
atpI	gene	atp-synthase	−	14441	15185	744
rps2	gene	ribosomal-protein	−	15410	16121	711
rpoC2	gene	rna-polymerase	−	16338	20496	4158
rpoC1	gene	rna-polymerase	−	20672	23502	2830
rpoB	gene	rna-polymerase	−	23528	26741	3213
trnC-GCA	gene	translation-rna	+	27969	28040	71
petN	gene	cytochrome	+	28202	28292	90
psbM	gene	photosystem-ii	−	29279	29384	105
trnD-GUC	gene	translation-rna	−	29902	29976	74
trnY-GUA	gene	translation-rna	−	30092	30176	84
trnE-UUC	gene	translation-rna	−	30246	30319	73
trnT-GGU	gene	translation-rna	+	30939	31011	72
psbD	gene	photosystem-ii	+	32271	33333	1062
psbC	gene	photosystem-ii	+	33316	34702	1386
trnS-UGA	gene	translation-rna	−	34937	35030	93
psbZ	gene	photosystem-ii	+	35363	35552	189
trnG-GCC	gene	translation-rna	+	35796	35867	71
trnfM-CAU	gene	translation-rna	−	36027	36101	74
rps14	gene	ribosomal-protein	−	36245	36548	303
psaB	gene	photosystem-i	−	36670	38875	2205
psaA	gene	photosystem-i	−	38900	41153	2253
pafI	gene	other	−	41951	43920	1969
trnS-GGA	gene	translation-rna	+	44759	44846	87
rps4	gene	ribosomal-protein	−	45140	45746	606
trnT-UGU	gene	translation-rna	−	46134	46207	73
trnL-UAA	gene	translation-rna	+	46906	47466	560
trnF-GAA	gene	translation-rna	+	47748	47821	73
ndhJ	gene	nad-dehydrogenase	−	48495	48972	477
ndhK	gene	nad-dehydrogenase	−	49082	49760	678
ndhC	gene	nad-dehydrogenase	−	49811	50174	363
trnV-UAC	gene	translation-rna	−	51099	51751	652
trnM-CAU	gene	translation-rna	+	51931	52004	73
atpE	gene	atp-synthase	−	52194	52596	402
atpB	gene	atp-synthase	−	52592	54089	1497
rbcL	gene	other	+	54873	56307	1434
accD	gene	other	+	56999	58481	1482
psaI	gene	photosystem-i	+	59212	59323	111
pafII	gene	other	+	59772	60327	555
cemA	gene	other	+	60973	61663	690
petA	gene	cytochrome	+	61870	62833	963
psbJ	gene	photosystem-ii	−	63879	64002	123
psbL	gene	photosystem-ii	−	64136	64253	117
psbF	gene	photosystem-ii	−	64276	64396	120
psbE	gene	photosystem-ii	−	64410	64662	252
petL	gene	cytochrome	+	65543	65639	96
petG	gene	cytochrome	+	65807	65921	114
trnW-CCA	gene	translation-rna	−	66043	66117	74
trnP-UGG	gene	translation-rna	−	66285	66359	74
psaJ	gene	photosystem-i	+	66640	66775	135
rpl33	gene	ribosomal-protein	+	67218	67419	201
rps18	gene	ribosomal-protein	+	67579	67885	306
rpl20	gene	ribosomal-protein	−	68113	68500	387
rps12	gene	ribosomal-protein	−	69235	97429	28194
rps12	gene	ribosomal-protein	+	69235	139097	69862
clpP1	gene	other	−	69489	71405	1916
psbB	gene	photosystem-ii	+	71861	73388	1527
psbT	gene	photosystem-ii	+	73576	73678	102
pbf1	gene	other	−	73743	73875	132
psbH	gene	photosystem-ii	+	73980	74199	219
petB	gene	cytochrome	+	74333	75703	1370
petD	gene	cytochrome	+	75891	77098	1207
rpoA	gene	rna-polymerase	−	77269	78277	1008
rps11	gene	ribosomal-protein	−	78346	78763	417
rpl36	gene	ribosomal-protein	−	78872	78986	114
infA	gene	other	−	79081	79315	234
rps8	gene	ribosomal-protein	−	79443	79848	405
rpl14	gene	ribosomal-protein	−	80018	80387	369
rpl16	gene	ribosomal-protein	−	80518	81784	1266
rps3	gene	ribosomal-protein	−	81927	82590	663
rpl22	gene	ribosomal-protein	−	82574	83048	474
rps19	gene	ribosomal-protein	−	83129	83408	279
rpl2	gene	ribosomal-protein	−	83474	84953	1479
rpl23	gene	ribosomal-protein	−	84971	85253	282
trnI-CAU	gene	translation-rna	−	85418	85492	74
ycf2	gene	other	+	85586	92408	6822
trnL-CAA	gene	translation-rna	−	93001	93082	81
ndhB	gene	nad-dehydrogenase	−	93653	95861	2208
rps7	gene	ribosomal-protein	−	96114	96582	468
trnV-GAC	gene	translation-rna	+	99091	99163	72
rrn16	gene	ribosomal-rna	+	99383	100874	1491
trnI-GAU	gene	translation-rna	+	101171	102189	1018
trnA-UGC	gene	translation-rna	+	102253	103132	879
rrn23	gene	ribosomal-rna	+	103296	106107	2811
rrn4.5	gene	ribosomal-rna	+	106205	106308	103
rrn5	gene	ribosomal-rna	+	106563	106684	121
trnR-ACG	gene	translation-rna	+	106927	107001	74
trnN-GUU	gene	translation-rna	−	107573	107645	72
ycf1	gene	other	+	107986	109117	1131
ndhF	gene	nad-dehydrogenase	−	109010	111242	2232
rpl32	gene	ribosomal-protein	+	111719	111890	171
trnL-UAG	gene	translation-rna	+	112616	112696	80
ccsA	gene	other	+	112785	113757	972
ndhD	gene	nad-dehydrogenase	−	113981	115484	1503
psaC	gene	photosystem-i	−	115601	115847	246
ndhE	gene	nad-dehydrogenase	−	116107	116413	306
ndhG	gene	nad-dehydrogenase	−	116621	117152	531
ndhI	gene	nad-dehydrogenase	−	117514	118021	507
ndhA	gene	nad-dehydrogenase	−	118101	120199	2098
ndhH	gene	nad-dehydrogenase	−	120200	121382	1182
rps15	gene	ribosomal-protein	−	121496	121769	273
ycf1	gene	other	−	122211	127746	5535
trnN-GUU	gene	translation-rna	+	128087	128159	72
trnR-ACG	gene	translation-rna	−	128731	128805	74
rrn5	gene	ribosomal-rna	−	129048	129169	121
rrn4.5	gene	ribosomal-rna	−	129424	129527	103
rrn23	gene	ribosomal-rna	−	129625	132436	2811
trnA-UGC	gene	translation-rna	−	132600	133479	879
trnI-GAU	gene	translation-rna	−	133543	134561	1018
rrn16	gene	ribosomal-rna	−	134858	136349	1491
trnV-GAC	gene	translation-rna	−	136569	136641	72
rps7	gene	ribosomal-protein	+	139150	139618	468
ndhB	gene	nad-dehydrogenase	+	139871	142079	2208
trnL-CAA	gene	translation-rna	+	142650	142731	81
ycf2	gene	other	−	143324	150146	6822
trnI-CAU	gene	translation-rna	+	150240	150314	74
rpl23	gene	ribosomal-protein	+	150479	150761	282
rpl2	gene	ribosomal-protein	+	150779	152258	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_082140.1DNA · accDNC_082140DNA · atpBNC_082140DNA · matKNC_082140DNA · ndhFNC_082140DNA · psbANC_082140DNA · rbcLNC_082140DNA · rps12NC_082140DNA · ycf1NC_082140