Coordinate-aware organelle record

Origanum vulgare subsp. virens chloroplast genome

Available ON641292.1 151,826 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	426	1485	1059
trnK-UUU	gene	translation-rna	−	1705	4257	2552
matK	gene	other	−	1990	3520	1530
rps16	gene	ribosomal-protein	−	4806	5951	1145
trnQ-UUG	gene	translation-rna	−	6878	6950	72
psbK	gene	photosystem-ii	+	7330	7516	186
psbI	gene	photosystem-ii	+	7907	8018	111
trnS-GCU	gene	translation-rna	−	8168	8256	88
trnG-UCC	gene	translation-rna	+	8978	9733	755
trnR-UCU	gene	translation-rna	+	9913	9985	72
atpA	gene	atp-synthase	−	10092	11616	1524
atpF	gene	atp-synthase	−	11710	12961	1251
atpH	gene	atp-synthase	−	13227	13473	246
atpI	gene	atp-synthase	−	14519	15263	744
rps2	gene	ribosomal-protein	−	15488	16199	711
rpoC2	gene	rna-polymerase	−	16420	20602	4182
rpoC1	gene	rna-polymerase	−	20774	23593	2819
rpoB	gene	rna-polymerase	−	23619	26832	3213
trnC-GCA	gene	translation-rna	+	27953	28024	71
petN	gene	cytochrome	+	28184	28274	90
psbM	gene	photosystem-ii	−	29247	29352	105
trnD-GUC	gene	translation-rna	−	29869	29943	74
trnY-GUA	gene	translation-rna	−	30053	30137	84
trnE-UUC	gene	translation-rna	−	30216	30289	73
trnT-GGU	gene	translation-rna	+	30851	30923	72
psbD	gene	photosystem-ii	+	32269	33331	1062
psbC	gene	photosystem-ii	+	33314	34700	1386
trnS-UGA	gene	translation-rna	−	34946	35039	93
psbZ	gene	photosystem-ii	+	35378	35567	189
trnG-GCC	gene	translation-rna	+	35838	35909	71
trnfM-CAU	gene	translation-rna	−	36071	36145	74
rps14	gene	ribosomal-protein	−	36294	36597	303
psaB	gene	photosystem-i	−	36719	38924	2205
psaA	gene	photosystem-i	−	38949	41202	2253
pafI	gene	other	−	41951	43881	1930
trnS-GGA	gene	translation-rna	+	44731	44818	87
rps4	gene	ribosomal-protein	−	45105	45711	606
trnT-UGU	gene	translation-rna	−	46101	46174	73
trnL-UAA	gene	translation-rna	+	46846	47401	555
trnF-GAA	gene	translation-rna	+	47693	47766	73
ndhJ	gene	nad-dehydrogenase	−	48402	48879	477
ndhK	gene	nad-dehydrogenase	−	48989	49667	678
ndhC	gene	nad-dehydrogenase	−	49718	50081	363
trnV-UAC	gene	translation-rna	−	51050	51695	645
trnM-CAU	gene	translation-rna	+	51875	51948	73
atpE	gene	atp-synthase	−	52143	52545	402
atpB	gene	atp-synthase	−	52541	54032	1491
rbcL	gene	other	+	54830	56264	1434
accD	gene	other	+	56954	58442	1488
psaI	gene	photosystem-i	+	58905	59016	111
pafII	gene	other	+	59463	60018	555
cemA	gene	other	+	60647	61337	690
petA	gene	cytochrome	+	61550	62513	963
psbJ	gene	photosystem-ii	−	63509	63632	123
psbL	gene	photosystem-ii	−	63766	63883	117
psbF	gene	photosystem-ii	−	63906	64026	120
psbE	gene	photosystem-ii	−	64040	64292	252
petL	gene	cytochrome	+	65169	65265	96
petG	gene	cytochrome	+	65434	65548	114
trnW-CCA	gene	translation-rna	−	65662	65736	74
trnP-UGG	gene	translation-rna	−	65909	65983	74
psaJ	gene	photosystem-i	+	66262	66397	135
rpl33	gene	ribosomal-protein	+	66845	67049	204
rps18	gene	ribosomal-protein	+	67219	67525	306
rpl20	gene	ribosomal-protein	−	67759	68146	387
rps12	gene	ribosomal-protein	−	68955	97046	28091
clpP1	gene	other	−	69193	71098	1905
psbB	gene	photosystem-ii	+	71549	73076	1527
psbT	gene	photosystem-ii	+	73257	73359	102
pbf1	gene	other	−	73427	73559	132
psbH	gene	photosystem-ii	+	73664	73886	222
petB	gene	cytochrome	+	74011	75383	1372
petD	gene	cytochrome	+	75565	76744	1179
rpoA	gene	rna-polymerase	−	76926	77934	1008
rps11	gene	ribosomal-protein	−	78005	78422	417
rpl36	gene	ribosomal-protein	−	78531	78645	114
infA	gene	other	−	78740	78974	234
rps8	gene	ribosomal-protein	−	79095	79500	405
rpl14	gene	ribosomal-protein	−	79669	80038	369
rpl16	gene	ribosomal-protein	−	80169	81450	1281
rps3	gene	ribosomal-protein	−	81594	82257	663
rpl22	gene	ribosomal-protein	−	82241	82709	468
rps19	gene	ribosomal-protein	−	82778	83057	279
rpl2	gene	ribosomal-protein	−	83116	84604	1488
rpl23	gene	ribosomal-protein	−	84622	84904	282
trnI-CAU	gene	translation-rna	−	85069	85143	74
ycf2	gene	other	+	85231	92023	6792
ycf15	gene	other	+	92113	92362	249
trnL-CAA	gene	translation-rna	−	92617	92698	81
ndhB	gene	nad-dehydrogenase	−	93258	95466	2208
rps7	gene	ribosomal-protein	−	95731	96199	468
trnV-GAC	gene	translation-rna	+	98682	98754	72
rrn16	gene	ribosomal-rna	+	98980	100471	1491
trnI-GAU	gene	translation-rna	+	100769	101795	1026
trnA-UGC	gene	translation-rna	+	101864	102742	878
rrn23	gene	ribosomal-rna	+	102907	105718	2811
rrn4.5	gene	ribosomal-rna	+	105816	105919	103
rrn5	gene	ribosomal-rna	+	106179	106300	121
trnR-ACG	gene	translation-rna	+	106543	106617	74
trnN-GUU	gene	translation-rna	−	107142	107214	72
ycf1	gene	other	+	107543	108674	1131
ndhF	gene	nad-dehydrogenase	−	108567	110805	2238
rpl32	gene	ribosomal-protein	+	111261	111432	171
trnL-UAG	gene	translation-rna	+	112148	112228	80
ccsA	gene	other	+	112330	113308	978
ndhD	gene	nad-dehydrogenase	−	113560	114712	1152
psaC	gene	photosystem-i	−	115185	115431	246
ndhE	gene	nad-dehydrogenase	−	115665	115971	306
ndhG	gene	nad-dehydrogenase	−	116194	116725	531
ndhI	gene	nad-dehydrogenase	−	117098	117605	507
ndhA	gene	nad-dehydrogenase	−	117680	119771	2091
ndhH	gene	nad-dehydrogenase	−	119772	120954	1182
rps15	gene	ribosomal-protein	−	121053	121326	273
ycf1	gene	other	−	121753	127297	5544
trnN-GUU	gene	translation-rna	+	127626	127698	72
trnR-ACG	gene	translation-rna	−	128223	128297	74
rrn5	gene	ribosomal-rna	−	128540	128661	121
rrn4.5	gene	ribosomal-rna	−	128921	129024	103
rrn23	gene	ribosomal-rna	−	129122	131933	2811
trnA-UGC	gene	translation-rna	−	132098	132976	878
trnI-GAU	gene	translation-rna	−	133045	134071	1026
rrn16	gene	ribosomal-rna	−	134369	135860	1491
trnV-GAC	gene	translation-rna	−	136086	136158	72
rps7	gene	ribosomal-protein	+	138641	139109	468
ndhB	gene	nad-dehydrogenase	+	139374	141582	2208
trnL-CAA	gene	translation-rna	+	142142	142223	81
ycf15	gene	other	−	142478	142727	249
ycf2	gene	other	−	142817	149609	6792
trnI-CAU	gene	translation-rna	+	149697	149771	74
rpl23	gene	ribosomal-protein	+	149936	150218	282
rpl2	gene	ribosomal-protein	+	150236	151724	1488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeON641292.1DNA · accDON641292DNA · atpBON641292DNA · matKON641292DNA · ndhFON641292DNA · psbAON641292DNA · rbcLON641292DNA · rps12ON641292DNA · ycf1ON641292