Coordinate-aware organelle record

Origanum vulgare subsp. vulgare chloroplast genome

Available ON641323.1 151,830 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	411	1470	1059
trnK-UUU	gene	translation-rna	−	1690	4241	2551
matK	gene	other	−	1975	3505	1530
rps16	gene	ribosomal-protein	−	4790	5935	1145
trnQ-UUG	gene	translation-rna	−	6869	6941	72
psbK	gene	photosystem-ii	+	7321	7507	186
psbI	gene	photosystem-ii	+	7898	8009	111
trnS-GCU	gene	translation-rna	−	8158	8246	88
trnG-UCC	gene	translation-rna	+	8971	9726	755
trnR-UCU	gene	translation-rna	+	9906	9978	72
atpA	gene	atp-synthase	−	10085	11609	1524
atpF	gene	atp-synthase	−	11703	12956	1253
atpH	gene	atp-synthase	−	13222	13468	246
atpI	gene	atp-synthase	−	14512	15256	744
rps2	gene	ribosomal-protein	−	15479	16190	711
rpoC2	gene	rna-polymerase	−	16407	20589	4182
rpoC1	gene	rna-polymerase	−	20761	23580	2819
rpoB	gene	rna-polymerase	−	23606	26819	3213
trnC-GCA	gene	translation-rna	+	27946	28017	71
petN	gene	cytochrome	+	28177	28267	90
psbM	gene	photosystem-ii	−	29244	29349	105
trnD-GUC	gene	translation-rna	−	29866	29940	74
trnY-GUA	gene	translation-rna	−	30055	30139	84
trnE-UUC	gene	translation-rna	−	30218	30291	73
trnT-GGU	gene	translation-rna	+	30853	30925	72
psbD	gene	photosystem-ii	+	32269	33331	1062
psbC	gene	photosystem-ii	+	33314	34700	1386
trnS-UGA	gene	translation-rna	−	34945	35038	93
psbZ	gene	photosystem-ii	+	35377	35566	189
trnG-GCC	gene	translation-rna	+	35837	35908	71
trnfM-CAU	gene	translation-rna	−	36073	36147	74
rps14	gene	ribosomal-protein	−	36296	36599	303
psaB	gene	photosystem-i	−	36721	38926	2205
psaA	gene	photosystem-i	−	38951	41204	2253
pafI	gene	other	−	41945	43876	1931
trnS-GGA	gene	translation-rna	+	44725	44812	87
rps4	gene	ribosomal-protein	−	45099	45705	606
trnT-UGU	gene	translation-rna	−	46094	46167	73
trnL-UAA	gene	translation-rna	+	46831	47386	555
trnF-GAA	gene	translation-rna	+	47678	47751	73
ndhJ	gene	nad-dehydrogenase	−	48387	48864	477
ndhK	gene	nad-dehydrogenase	−	48974	49652	678
ndhC	gene	nad-dehydrogenase	−	49703	50066	363
trnV-UAC	gene	translation-rna	−	51036	51681	645
trnM-CAU	gene	translation-rna	+	51861	51934	73
atpE	gene	atp-synthase	−	52129	52531	402
atpB	gene	atp-synthase	−	52527	54018	1491
rbcL	gene	other	+	54816	56250	1434
accD	gene	other	+	56947	58429	1482
psaI	gene	photosystem-i	+	58892	59003	111
pafII	gene	other	+	59453	60008	555
cemA	gene	other	+	60632	61322	690
petA	gene	cytochrome	+	61535	62498	963
psbJ	gene	photosystem-ii	−	63494	63617	123
psbL	gene	photosystem-ii	−	63751	63868	117
psbF	gene	photosystem-ii	−	63891	64011	120
psbE	gene	photosystem-ii	−	64025	64277	252
petL	gene	cytochrome	+	65154	65250	96
petG	gene	cytochrome	+	65419	65533	114
trnW-CCA	gene	translation-rna	−	65647	65721	74
trnP-UGG	gene	translation-rna	−	65894	65968	74
psaJ	gene	photosystem-i	+	66247	66382	135
rpl33	gene	ribosomal-protein	+	66831	67035	204
rps18	gene	ribosomal-protein	+	67205	67511	306
rpl20	gene	ribosomal-protein	−	67747	68134	387
rps12	gene	ribosomal-protein	−	68943	97049	28106
clpP1	gene	other	−	69181	71094	1913
psbB	gene	photosystem-ii	+	71545	73072	1527
psbT	gene	photosystem-ii	+	73253	73355	102
pbf1	gene	other	−	73423	73555	132
psbH	gene	photosystem-ii	+	73660	73882	222
petB	gene	cytochrome	+	74007	75388	1381
petD	gene	cytochrome	+	75570	76749	1179
rpoA	gene	rna-polymerase	−	76931	77939	1008
rps11	gene	ribosomal-protein	−	78010	78427	417
rpl36	gene	ribosomal-protein	−	78536	78650	114
infA	gene	other	−	78745	78979	234
rps8	gene	ribosomal-protein	−	79101	79506	405
rpl14	gene	ribosomal-protein	−	79677	80046	369
rpl16	gene	ribosomal-protein	−	80177	81459	1282
rps3	gene	ribosomal-protein	−	81603	82266	663
rpl22	gene	ribosomal-protein	−	82250	82718	468
rps19	gene	ribosomal-protein	−	82787	83066	279
rpl2	gene	ribosomal-protein	−	83125	84613	1488
rpl23	gene	ribosomal-protein	−	84631	84913	282
trnI-CAU	gene	translation-rna	−	85078	85152	74
ycf2	gene	other	+	85240	92026	6786
ycf15	gene	other	+	92116	92365	249
trnL-CAA	gene	translation-rna	−	92620	92701	81
ndhB	gene	nad-dehydrogenase	−	93261	95469	2208
rps7	gene	ribosomal-protein	−	95734	96202	468
trnV-GAC	gene	translation-rna	+	98685	98757	72
rrn16	gene	ribosomal-rna	+	98983	100474	1491
trnI-GAU	gene	translation-rna	+	100772	101796	1024
trnA-UGC	gene	translation-rna	+	101865	102743	878
rrn23	gene	ribosomal-rna	+	102908	105719	2811
rrn4.5	gene	ribosomal-rna	+	105817	105920	103
rrn5	gene	ribosomal-rna	+	106180	106301	121
trnR-ACG	gene	translation-rna	+	106544	106618	74
trnN-GUU	gene	translation-rna	−	107143	107215	72
ycf1	gene	other	+	107544	108675	1131
ndhF	gene	nad-dehydrogenase	−	108568	110800	2232
rpl32	gene	ribosomal-protein	+	111257	111428	171
trnL-UAG	gene	translation-rna	+	112149	112229	80
ccsA	gene	other	+	112331	113309	978
ndhD	gene	nad-dehydrogenase	−	113561	114950	1389
psaC	gene	photosystem-i	−	115187	115433	246
ndhE	gene	nad-dehydrogenase	−	115667	115973	306
ndhG	gene	nad-dehydrogenase	−	116196	116727	531
ndhI	gene	nad-dehydrogenase	−	117109	117616	507
ndhA	gene	nad-dehydrogenase	−	117691	119783	2092
ndhH	gene	nad-dehydrogenase	−	119784	120966	1182
rps15	gene	ribosomal-protein	−	121065	121338	273
ycf1	gene	other	−	121765	127309	5544
trnN-GUU	gene	translation-rna	+	127638	127710	72
trnR-ACG	gene	translation-rna	−	128235	128309	74
rrn5	gene	ribosomal-rna	−	128552	128673	121
rrn4.5	gene	ribosomal-rna	−	128933	129036	103
rrn23	gene	ribosomal-rna	−	129134	131945	2811
trnA-UGC	gene	translation-rna	−	132110	132988	878
trnI-GAU	gene	translation-rna	−	133057	134081	1024
rrn16	gene	ribosomal-rna	−	134379	135870	1491
trnV-GAC	gene	translation-rna	−	136096	136168	72
rps7	gene	ribosomal-protein	+	138651	139119	468
ndhB	gene	nad-dehydrogenase	+	139384	141592	2208
trnL-CAA	gene	translation-rna	+	142152	142233	81
ycf15	gene	other	−	142488	142737	249
ycf2	gene	other	−	142827	149613	6786
trnI-CAU	gene	translation-rna	+	149701	149775	74
rpl23	gene	ribosomal-protein	+	149940	150222	282
rpl2	gene	ribosomal-protein	+	150240	151728	1488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeON641323.1DNA · accDON641323DNA · atpBON641323DNA · matKON641323DNA · ndhFON641323DNA · psbAON641323DNA · rbcLON641323DNA · rps12ON641323DNA · ycf1ON641323