Coordinate-aware organelle record

Orthosiphon aristatus chloroplast genome

Available NC_082580.1 152,155 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	12	85	73
psbA	gene	photosystem-ii	−	384	1443	1059
trnK-UUU	gene	translation-rna	−	1671	4250	2579
matK	gene	other	−	1990	3511	1521
rps16	gene	ribosomal-protein	−	4776	5910	1134
trnQ-UUG	gene	translation-rna	−	6850	6922	72
psbK	gene	photosystem-ii	+	7307	7493	186
psbI	gene	photosystem-ii	+	7879	7990	111
trnS-GCU	gene	translation-rna	−	8143	8231	88
trnG-UCC	gene	translation-rna	+	8970	9732	762
trnR-UCU	gene	translation-rna	+	9923	9995	72
atpA	gene	atp-synthase	−	10099	11623	1524
atpF	gene	atp-synthase	−	11724	12965	1241
atpH	gene	atp-synthase	−	13238	13484	246
atpI	gene	atp-synthase	−	14517	15261	744
rps2	gene	ribosomal-protein	−	15487	16198	711
rpoC2	gene	rna-polymerase	−	16406	20564	4158
rpoC1	gene	rna-polymerase	−	20740	23547	2807
rpoB	gene	rna-polymerase	−	23573	26786	3213
trnC-GCA	gene	translation-rna	+	27972	28043	71
petN	gene	cytochrome	+	28206	28296	90
psbM	gene	photosystem-ii	−	29305	29410	105
trnD-GUC	gene	translation-rna	−	29932	30006	74
trnY-GUA	gene	translation-rna	−	30123	30207	84
trnE-UUC	gene	translation-rna	−	30290	30363	73
trnT-GGU	gene	translation-rna	+	30964	31036	72
psbD	gene	photosystem-ii	+	32312	33374	1062
psbC	gene	photosystem-ii	+	33357	34743	1386
trnS-UGA	gene	translation-rna	−	34975	35068	93
psbZ	gene	photosystem-ii	+	35401	35590	189
trnG-GCC	gene	translation-rna	+	35834	35905	71
trnM-CAU	gene	translation-rna	−	36077	36151	74
rps14	gene	ribosomal-protein	−	36287	36590	303
psaB	gene	photosystem-i	−	36712	38917	2205
psaA	gene	photosystem-i	−	38942	41195	2253
pafI	gene	other	−	41970	43919	1949
trnS-GGA	gene	translation-rna	+	44761	44848	87
rps4	gene	ribosomal-protein	−	45132	45738	606
trnT-UGU	gene	translation-rna	−	46135	46208	73
trnL-UAA	gene	translation-rna	+	46896	47453	557
trnF-GAA	gene	translation-rna	+	47735	47808	73
ndhJ	gene	nad-dehydrogenase	−	48490	48967	477
ndhK	gene	nad-dehydrogenase	−	49077	49755	678
ndhC	gene	nad-dehydrogenase	−	49805	50168	363
trnM-CAU	gene	translation-rna	+	51851	51923	72
atpE	gene	atp-synthase	−	52141	52543	402
atpB	gene	atp-synthase	−	52539	54036	1497
rbcL	gene	other	+	54849	56283	1434
accD	gene	other	+	56975	58457	1482
psaI	gene	photosystem-i	+	59185	59296	111
pafII	gene	other	+	59743	60298	555
cemA	gene	other	+	60949	61639	690
petA	gene	cytochrome	+	61853	62816	963
psbJ	gene	photosystem-ii	−	63835	63958	123
psbL	gene	photosystem-ii	−	64092	64209	117
psbF	gene	photosystem-ii	−	64232	64352	120
psbE	gene	photosystem-ii	−	64366	64618	252
petL	gene	cytochrome	+	65314	65410	96
petG	gene	cytochrome	+	65577	65691	114
trnW-CCA	gene	translation-rna	−	65813	65887	74
trnP-UGG	gene	translation-rna	−	66055	66129	74
psaJ	gene	photosystem-i	+	66412	66547	135
rpl33	gene	ribosomal-protein	+	67001	67196	195
rps18	gene	ribosomal-protein	+	67362	67668	306
rpl20	gene	ribosomal-protein	−	67891	68278	387
rps12	gene	ribosomal-protein	−	69006	97169	28163
rps12	gene	ribosomal-protein	+	69006	138878	69872
clpP1	gene	other	−	69238	71170	1932
psbB	gene	photosystem-ii	+	71627	73154	1527
psbT	gene	photosystem-ii	+	73346	73448	102
pbf1	gene	other	−	73513	73645	132
psbH	gene	photosystem-ii	+	73750	73969	219
petB	gene	cytochrome	+	74111	75476	1365
petD	gene	cytochrome	+	75664	76848	1184
rpoA	gene	rna-polymerase	−	77024	78032	1008
rps11	gene	ribosomal-protein	−	78110	78527	417
rpl36	gene	ribosomal-protein	−	78636	78750	114
infA	gene	other	−	78845	79079	234
rps8	gene	ribosomal-protein	−	79205	79610	405
rpl14	gene	ribosomal-protein	−	79781	80150	369
rpl16	gene	ribosomal-protein	−	80282	81511	1229
rps3	gene	ribosomal-protein	−	81660	82317	657
rpl22	gene	ribosomal-protein	−	82301	82775	474
rps19	gene	ribosomal-protein	−	82856	83006	150
rpl2	gene	ribosomal-protein	−	83202	84681	1479
rpl23	gene	ribosomal-protein	−	84699	84981	282
trnI-CAU	gene	translation-rna	−	85146	85220	74
ycf2	gene	other	+	85314	92142	6828
ycf15	gene	other	+	92349	92481	132
trnL-CAA	gene	translation-rna	−	92741	92822	81
ndhB	gene	nad-dehydrogenase	−	93391	95599	2208
rps7	gene	ribosomal-protein	−	95854	96322	468
trnV-GAC	gene	translation-rna	+	98826	98898	72
rrn16	gene	ribosomal-rna	+	99118	100609	1491
trnI-GAU	gene	translation-rna	+	100906	101924	1018
trnA-UGC	gene	translation-rna	+	101988	102866	878
rrn23S	gene	ribosomal-rna	+	103030	105481	2451
rrn4.5	gene	ribosomal-rna	+	105939	106042	103
rrn5	gene	ribosomal-rna	+	106297	106418	121
trnR-ACG	gene	translation-rna	+	106661	106735	74
trnN-GUU	gene	translation-rna	−	107308	107380	72
ycf1	gene	other	+	107721	113274	5553
rps15	gene	ribosomal-protein	+	113700	113973	273
ndhH	gene	nad-dehydrogenase	+	114087	115269	1182
ndhA	gene	nad-dehydrogenase	+	115270	117373	2103
ndhI	gene	nad-dehydrogenase	+	117453	117960	507
ndhG	gene	nad-dehydrogenase	+	118322	118853	531
ndhE	gene	nad-dehydrogenase	+	119061	119367	306
psaC	gene	photosystem-i	+	119621	119867	246
ndhD	gene	nad-dehydrogenase	+	119984	121487	1503
ccsA	gene	other	−	121699	122671	972
trnL-UAG	gene	translation-rna	−	122787	122867	80
rpl32	gene	ribosomal-protein	−	123627	123798	171
ndhF	gene	nad-dehydrogenase	+	124276	126508	2232
trnN-GUU	gene	translation-rna	+	127873	127945	72
trnR-ACG	gene	translation-rna	−	128518	128592	74
rrn5	gene	ribosomal-rna	−	128835	128956	121
rrn4.5	gene	ribosomal-rna	−	129211	129314	103
rrn23	gene	ribosomal-rna	−	129412	132223	2811
trnA-UGC	gene	translation-rna	−	132387	133265	878
trnI-GAU	gene	translation-rna	−	133329	134347	1018
rrn16	gene	ribosomal-rna	−	134644	136135	1491
trnV-GAC	gene	translation-rna	−	136355	136427	72
rps7	gene	ribosomal-protein	+	138931	139399	468
ndhB	gene	nad-dehydrogenase	+	139654	141862	2208
trnL-CAA	gene	translation-rna	+	142431	142512	81
ycf15	gene	other	−	142772	142904	132
ycf2	gene	other	−	143111	149939	6828
trnI-CAU	gene	translation-rna	+	150033	150107	74
rpl23	gene	ribosomal-protein	+	150272	150554	282
rpl2	gene	ribosomal-protein	+	150572	152051	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_082580.1DNA · accDNC_082580DNA · atpBNC_082580DNA · matKNC_082580DNA · ndhFNC_082580DNA · psbANC_082580DNA · rbcLNC_082580DNA · rps12NC_082580DNA · ycf1NC_082580