Coordinate-aware organelle record

Panzerina lanata chloroplast genome

Available PQ279582.1 151,741 bp 132 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 2-75 bp · − strandpsbA · gene · 308-1,366 bp · − strandtrnK-UUU · gene · 1,599-4,186 bp · − strandmatK · gene · 1,901-3,436 bp · − strandrps16 · gene · 5,090-6,234 bp · − strandtrnQ-UUG · gene · 6,911-6,982 bp · − strandpsbK · gene · 7,319-7,504 bp · + strandpsbI · gene · 7,888-7,998 bp · + strandtrnS-GGA · gene · 8,125-8,212 bp · − strandtrnG-UCC · gene · 8,889-9,653 bp · + strandtrnR-UCU · gene · 9,827-9,901 bp · + strandatpA · gene · 9,998-11,521 bp · − strandatpF · gene · 11,609-12,818 bp · − strandatpH · gene · 13,183-13,428 bp · − strandatpI · gene · 14,362-15,105 bp · − strandrps2 · gene · 15,336-16,046 bp · − strandrpoC2 · gene · 16,266-20,456 bp · − strandrpoC1 · gene · 20,611-23,443 bp · − strandrpoB · gene · 23,470-26,682 bp · − strandtrnC-GCA · gene · 27,778-27,853 bp · + strandpetN · gene · 28,709-28,798 bp · + strandpsbM · gene · 29,587-29,691 bp · − strandtrnD-GUC · gene · 30,221-30,294 bp · − strandtrnY-GUA · gene · 30,410-30,493 bp · − strandtrnE-UUC · gene · 30,553-30,625 bp · − strandtrnT-CGU · gene · 31,192-31,263 bp · − strandpsbD · gene · 32,407-33,468 bp · + strandpsbC · gene · 33,416-34,837 bp · + strandtrnS-UGA · gene · 35,070-35,162 bp · − strandpsbZ · gene · 35,489-35,677 bp · + strandtrnG-GCC · gene · 35,904-35,974 bp · + strandtrnfM-CAU · gene · 36,123-36,196 bp · − strandrps14 · gene · 36,346-36,648 bp · − strandpsaB · gene · 36,776-38,980 bp · − strandpsaA · gene · 39,006-41,258 bp · − strandycf3 · gene · 41,986-43,919 bp · − strandtrnS-GGA · gene · 44,236-44,322 bp · + strandrps4 · gene · 44,607-45,212 bp · − strandtrnT-UGU · gene · 45,598-45,670 bp · − strandtrnL-UAA · gene · 46,349-46,922 bp · + strandtrnF-GAA · gene · 47,214-47,286 bp · + strandndhJ · gene · 47,957-48,451 bp · − strandndhK · gene · 48,534-49,211 bp · − strandndhC · gene · 49,264-49,626 bp · − strandtrnV-UAC · gene · 50,588-51,240 bp · − strandtrnM-CAU · gene · 51,429-51,501 bp · + strandatpE · gene · 51,719-52,120 bp · − strandatpB · gene · 52,117-53,613 bp · − strandrbcL · gene · 54,400-55,866 bp · + strandaccD · gene · 56,556-58,022 bp · + strandpsaI · gene · 58,714-58,824 bp · + strandycf4 · gene · 59,263-59,817 bp · + strandcemA · gene · 60,379-61,068 bp · + strandpetA · gene · 61,285-62,247 bp · + strandpsbJ · gene · 63,306-63,428 bp · − strandpsbL · gene · 63,566-63,682 bp · − strandpsbF · gene · 63,706-63,825 bp · − strandpsbE · gene · 63,840-64,091 bp · − strandpetL · gene · 65,054-65,149 bp · + strandpetG · gene · 65,325-65,438 bp · + strandtrnW-CCA · gene · 65,564-65,637 bp · − strandtrnP-UGG · gene · 65,789-65,862 bp · − strandpsaJ · gene · 66,137-66,271 bp · + strandrpl33 · gene · 66,744-66,944 bp · + strandrps18 · gene · 67,092-67,397 bp · + strandrpl20 · gene · 67,613-67,999 bp · − strandrps12 · gene · 68,761-96,920 bp · − strandrps12 · gene · 68,761-138,488 bp · + strandclpP · gene · 69,006-70,875 bp · − strandpsbB · gene · 71,307-72,833 bp · + strandpsbT · gene · 73,027-73,134 bp · + strandpsbN · gene · 73,195-73,326 bp · − strandpsbH · gene · 73,430-73,651 bp · + strandpetB · gene · 73,776-75,157 bp · + strandpetD · gene · 75,372-76,596 bp · + strandrpoA · gene · 76,765-77,784 bp · − strandrps11 · gene · 77,856-78,287 bp · − strandrpl36 · gene · 78,375-78,488 bp · − strandinfA · gene · 78,584-78,823 bp · − strandrps8 · gene · 78,946-79,359 bp · − strandrpl14 · gene · 79,533-79,901 bp · − strandrpl16 · gene · 80,028-81,319 bp · − strandrps3 · gene · 81,466-82,128 bp · − strandrpl22 · gene · 82,113-82,577 bp · − strandrps19 · gene · 82,637-82,915 bp · − strandrpl2 · gene · 82,968-84,458 bp · − strandrpl23 · gene · 84,477-84,758 bp · − strandtrnI-CAU · gene · 84,924-84,997 bp · − strandycf2 · gene · 85,086-91,943 bp · + strandycf15 · gene · 91,986-92,234 bp · + strandtrnL-CAA · gene · 92,495-92,575 bp · − strandndhB · gene · 93,120-95,331 bp · − strandrps7 · gene · 95,606-96,073 bp · − strandtrnV-GAC · gene · 98,537-98,608 bp · + strandrrn16 · gene · 98,836-100,326 bp · + strandtrnI-GAU · gene · 100,616-101,624 bp · + strandtrnA-UGC · gene · 101,689-102,567 bp · + strandrrn23 · gene · 102,759-105,569 bp · + strandrrn4.5 · gene · 105,668-105,770 bp · + strandrrn5 · gene · 106,026-106,146 bp · + strandtrnR-ACG · gene · 106,376-106,454 bp · + strandtrnN-GUU · gene · 107,027-107,098 bp · − strandndhF · gene · 108,488-110,710 bp · − strandrpl32 · gene · 111,216-111,392 bp · + strandtrnL-UAG · gene · 112,115-112,194 bp · + strandccsA · gene · 112,295-113,257 bp · + strandndhD · gene · 113,436-114,956 bp · − strandpsaC · gene · 115,057-115,302 bp · − strandndhE · gene · 115,568-115,873 bp · − strandndhG · gene · 116,081-116,611 bp · − strandndhI · gene · 116,996-117,502 bp · − strandndhA · gene · 117,589-119,756 bp · − strandndhH · gene · 119,758-120,939 bp · − strandrps15 · gene · 121,040-121,312 bp · − strandycf1 · gene · 121,699-127,191 bp · − strandtrnN-GUU · gene · 127,517-127,588 bp · + strandtrnR-ACG · gene · 128,161-128,239 bp · − strandrrn5 · gene · 128,469-128,589 bp · − strandrrn4.5 · gene · 128,845-128,947 bp · − strandrrn23 · gene · 129,046-131,856 bp · − strandtrnA-UGC · gene · 132,048-132,926 bp · − strandtrnI-GAU · gene · 132,991-133,999 bp · − strandrrn16 · gene · 134,289-135,779 bp · − strandtrnV-GAC · gene · 136,007-136,078 bp · − strandrps7 · gene · 138,542-139,009 bp · + strandndhB · gene · 139,284-141,495 bp · + strandtrnL-CAA · gene · 142,040-142,120 bp · + strandycf15 · gene · 142,381-142,629 bp · − strandycf2 · gene · 142,672-149,529 bp · − strandtrnI-CAU · gene · 149,618-149,691 bp · + strandrpl23 · gene · 149,857-150,138 bp · + strandrpl2 · gene · 150,157-151,647 bp · + strandPanzerina lanataANNOTATED PLASTOMEPQ279582.1151,741 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PQ279582.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−17574
psbAgenephotosystem-ii−30713661059
trnK-UUUgenetranslation-rna−159841862588
matKgeneother−190034361536
rps16generibosomal-protein−508962341145
trnQ-UUGgenetranslation-rna−6910698272
psbKgenephotosystem-ii+73187504186
psbIgenephotosystem-ii+78877998111
trnS-GGAgenetranslation-rna−8124821288
trnG-UCCgenetranslation-rna+88889653765
trnR-UCUgenetranslation-rna+9826990175
atpAgeneatp-synthase−9997115211524
atpFgeneatp-synthase−11608128181210
atpHgeneatp-synthase−1318213428246
atpIgeneatp-synthase−1436115105744
rps2generibosomal-protein−1533516046711
rpoC2generna-polymerase−16265204564191
rpoC1generna-polymerase−20610234432833
rpoBgenerna-polymerase−23469266823213
trnC-GCAgenetranslation-rna+277772785376
petNgenecytochrome+287082879890
psbMgenephotosystem-ii−2958629691105
trnD-GUCgenetranslation-rna−302203029474
trnY-GUAgenetranslation-rna−304093049384
trnE-UUCgenetranslation-rna−305523062573
trnT-CGUgenetranslation-rna−311913126372
psbDgenephotosystem-ii+32406334681062
psbCgenephotosystem-ii+33415348371422
trnS-UGAgenetranslation-rna−350693516293
psbZgenephotosystem-ii+3548835677189
trnG-GCCgenetranslation-rna+359033597471
trnfM-CAUgenetranslation-rna−361223619674
rps14generibosomal-protein−3634536648303
psaBgenephotosystem-i−36775389802205
psaAgenephotosystem-i−39005412582253
ycf3geneother−41985439191934
trnS-GGAgenetranslation-rna+442354432287
rps4generibosomal-protein−4460645212606
trnT-UGUgenetranslation-rna−455974567073
trnL-UAAgenetranslation-rna+4634846922574
trnF-GAAgenetranslation-rna+472134728673
ndhJgenenad-dehydrogenase−4795648451495
ndhKgenenad-dehydrogenase−4853349211678
ndhCgenenad-dehydrogenase−4926349626363
trnV-UACgenetranslation-rna−5058751240653
trnM-CAUgenetranslation-rna+514285150173
atpEgeneatp-synthase−5171852120402
atpBgeneatp-synthase−52116536131497
rbcLgeneother+54399558661467
accDgeneother+56555580221467
psaIgenephotosystem-i+5871358824111
ycf4geneother+5926259817555
cemAgeneother+6037861068690
petAgenecytochrome+6128462247963
psbJgenephotosystem-ii−6330563428123
psbLgenephotosystem-ii−6356563682117
psbFgenephotosystem-ii−6370563825120
psbEgenephotosystem-ii−6383964091252
petLgenecytochrome+650536514996
petGgenecytochrome+6532465438114
trnW-CCAgenetranslation-rna−655636563774
trnP-UGGgenetranslation-rna−657886586274
psaJgenephotosystem-i+6613666271135
rpl33generibosomal-protein+6674366944201
rps18generibosomal-protein+6709167397306
rpl20generibosomal-protein−6761267999387
rps12generibosomal-protein−687609692028160
rps12generibosomal-protein+6876013848869728
clpPgeneother−69005708751870
psbBgenephotosystem-ii+71306728331527
psbTgenephotosystem-ii+7302673134108
psbNgenephotosystem-ii−7319473326132
psbHgenephotosystem-ii+7342973651222
petBgenecytochrome+73775751571382
petDgenecytochrome+75371765961225
rpoAgenerna-polymerase−76764777841020
rps11generibosomal-protein−7785578287432
rpl36generibosomal-protein−7837478488114
infAgeneother−7858378823240
rps8generibosomal-protein−7894579359414
rpl14generibosomal-protein−7953279901369
rpl16generibosomal-protein−80027813191292
rps3generibosomal-protein−8146582128663
rpl22generibosomal-protein−8211282577465
rps19generibosomal-protein−8263682915279
rpl2generibosomal-protein−82967844581491
rpl23generibosomal-protein−8447684758282
trnI-CAUgenetranslation-rna−849238499774
ycf2geneother+85085919436858
ycf15geneother+9198592234249
trnL-CAAgenetranslation-rna−924949257581
ndhBgenenad-dehydrogenase−93119953312212
rps7generibosomal-protein−9560596073468
trnV-GACgenetranslation-rna+985369860872
rrn16generibosomal-rna+988351003261491
trnI-GAUgenetranslation-rna+1006151016241009
trnA-UGCgenetranslation-rna+101688102567879
rrn23generibosomal-rna+1027581055692811
rrn4.5generibosomal-rna+105667105770103
rrn5generibosomal-rna+106025106146121
trnR-ACGgenetranslation-rna+10637510645479
trnN-GUUgenetranslation-rna−10702610709872
ndhFgenenad-dehydrogenase−1084871107102223
rpl32generibosomal-protein+111215111392177
trnL-UAGgenetranslation-rna+11211411219480
ccsAgeneother+112294113257963
ndhDgenenad-dehydrogenase−1134351149561521
psaCgenephotosystem-i−115056115302246
ndhEgenenad-dehydrogenase−115567115873306
ndhGgenenad-dehydrogenase−116080116611531
ndhIgenenad-dehydrogenase−116995117502507
ndhAgenenad-dehydrogenase−1175881197562168
ndhHgenenad-dehydrogenase−1197571209391182
rps15generibosomal-protein−121039121312273
ycf1geneother−1216981271915493
trnN-GUUgenetranslation-rna+12751612758872
trnR-ACGgenetranslation-rna−12816012823979
rrn5generibosomal-rna−128468128589121
rrn4.5generibosomal-rna−128844128947103
rrn23generibosomal-rna−1290451318562811
trnA-UGCgenetranslation-rna−132047132926879
trnI-GAUgenetranslation-rna−1329901339991009
rrn16generibosomal-rna−1342881357791491
trnV-GACgenetranslation-rna−13600613607872
rps7generibosomal-protein+138541139009468
ndhBgenenad-dehydrogenase+1392831414952212
trnL-CAAgenetranslation-rna+14203914212081
ycf15geneother−142380142629249
ycf2geneother−1426711495296858
trnI-CAUgenetranslation-rna+14961714969174
rpl23generibosomal-protein+149856150138282
rpl2generibosomal-protein+1501561516471491

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources