Coordinate-aware organelle record

Paraphlomis hispida chloroplast genome

Available PQ231107.1 152,197 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	306	1365	1059
trnK-UUU	gene	translation-rna	−	1597	4189	2592
matK	gene	other	−	1904	3440	1536
rps16	gene	ribosomal-protein	−	5099	6240	1141
trnQ-UUG	gene	translation-rna	−	7184	7256	72
psbK	gene	photosystem-ii	+	7592	7778	186
psbI	gene	photosystem-ii	+	8154	8265	111
trnS-GGA	gene	translation-rna	−	8388	8476	88
trnG-UCC	gene	translation-rna	+	9169	9929	760
trnR-UCU	gene	translation-rna	+	10102	10177	75
atpA	gene	atp-synthase	−	10273	11797	1524
atpF	gene	atp-synthase	−	11884	13106	1222
atpH	gene	atp-synthase	−	13476	13722	246
atpI	gene	atp-synthase	−	14721	15465	744
rps2	gene	ribosomal-protein	−	15695	16406	711
rpoC2	gene	rna-polymerase	−	16705	20815	4110
rpoC1	gene	rna-polymerase	−	20969	23800	2831
rpoB	gene	rna-polymerase	−	23826	27039	3213
trnC-GCA	gene	translation-rna	+	28140	28216	76
petN	gene	cytochrome	+	29052	29142	90
psbM	gene	photosystem-ii	−	29929	30034	105
trnD-GUC	gene	translation-rna	−	30557	30631	74
trnY-GUA	gene	translation-rna	−	30745	30829	84
trnE-UUC	gene	translation-rna	−	30888	30961	73
trnT-CGU	gene	translation-rna	−	31531	31603	72
psbD	gene	photosystem-ii	+	32853	33915	1062
psbC	gene	photosystem-ii	+	33862	35284	1422
trnS-UGA	gene	translation-rna	−	35514	35607	93
psbZ	gene	photosystem-ii	+	35931	36120	189
trnG-GCC	gene	translation-rna	+	36349	36420	71
trnfM-CAU	gene	translation-rna	−	36569	36643	74
rps14	gene	ribosomal-protein	−	36792	37095	303
psaB	gene	photosystem-i	−	37222	39427	2205
psaA	gene	photosystem-i	−	39452	41705	2253
ycf3	gene	other	−	42432	44388	1956
trnS-GGA	gene	translation-rna	+	44717	44804	87
rps4	gene	ribosomal-protein	−	45102	45708	606
trnT-UGU	gene	translation-rna	−	46098	46171	73
trnL-UAA	gene	translation-rna	+	46848	47422	574
trnF-GAA	gene	translation-rna	+	47713	47786	73
ndhJ	gene	nad-dehydrogenase	−	48448	48943	495
ndhK	gene	nad-dehydrogenase	−	49025	49703	678
ndhC	gene	nad-dehydrogenase	−	49756	50119	363
trnV-UAC	gene	translation-rna	−	51085	51732	647
trnM-CAU	gene	translation-rna	+	51920	51993	73
atpE	gene	atp-synthase	−	52210	52612	402
atpB	gene	atp-synthase	−	52608	54105	1497
rbcL	gene	other	+	54887	56363	1476
accD	gene	other	+	57052	58519	1467
psaI	gene	photosystem-i	+	59205	59316	111
ycf4	gene	other	+	59751	60306	555
cemA	gene	other	+	60873	61563	690
petA	gene	cytochrome	+	61779	62742	963
psbJ	gene	photosystem-ii	−	63786	63909	123
psbL	gene	photosystem-ii	−	64046	64163	117
psbF	gene	photosystem-ii	−	64186	64306	120
psbE	gene	photosystem-ii	−	64320	64572	252
petL	gene	cytochrome	+	65499	65595	96
petG	gene	cytochrome	+	65769	65883	114
trnW-CCA	gene	translation-rna	−	66008	66082	74
trnP-UGG	gene	translation-rna	−	66251	66325	74
psaJ	gene	photosystem-i	+	66599	66734	135
rpl33	gene	ribosomal-protein	+	67206	67407	201
rps18	gene	ribosomal-protein	+	67553	67859	306
rpl20	gene	ribosomal-protein	−	68038	68425	387
rps12	gene	ribosomal-protein	−	69191	97346	28155
rps12	gene	ribosomal-protein	+	69191	138939	69748
clpP	gene	other	−	69431	71298	1867
psbB	gene	photosystem-ii	+	71735	73262	1527
psbT	gene	photosystem-ii	+	73456	73564	108
psbN	gene	photosystem-ii	−	73624	73756	132
psbH	gene	photosystem-ii	+	73859	74081	222
petB	gene	cytochrome	+	74205	75585	1380
petD	gene	cytochrome	+	75779	77001	1222
rpoA	gene	rna-polymerase	−	77163	78177	1014
rps11	gene	ribosomal-protein	−	78248	78680	432
rpl36	gene	ribosomal-protein	−	78767	78881	114
infA	gene	other	−	78976	79210	234
rps8	gene	ribosomal-protein	−	79334	79748	414
rpl14	gene	ribosomal-protein	−	79938	80307	369
rpl16	gene	ribosomal-protein	−	80433	81740	1307
rps3	gene	ribosomal-protein	−	81886	82549	663
rpl22	gene	ribosomal-protein	−	82533	82998	465
rps19	gene	ribosomal-protein	−	83057	83336	279
rpl2	gene	ribosomal-protein	−	83388	84880	1492
rpl23	gene	ribosomal-protein	−	84898	85180	282
trnI-CAU	gene	translation-rna	−	85345	85419	74
ycf2	gene	other	+	85507	92374	6867
ycf15	gene	other	+	92416	92665	249
trnL-CAA	gene	translation-rna	−	92925	93006	81
ndhB	gene	nad-dehydrogenase	−	93545	95757	2212
rps7	gene	ribosomal-protein	−	96031	96499	468
trnV-GAC	gene	translation-rna	+	98962	99034	72
rrn16	gene	ribosomal-rna	+	99261	100752	1491
trnI-GAU	gene	translation-rna	+	101041	102050	1009
trnA-UGC	gene	translation-rna	+	102114	102993	879
rrn23	gene	ribosomal-rna	+	103184	105995	2811
rrn4.5	gene	ribosomal-rna	+	106093	106196	103
rrn5	gene	ribosomal-rna	+	106451	106572	121
trnR-ACG	gene	translation-rna	+	106801	106880	79
trnN-GUU	gene	translation-rna	−	107446	107518	72
ndhF	gene	nad-dehydrogenase	−	108907	111130	2223
rpl32	gene	ribosomal-protein	+	111634	111811	177
trnL-UAG	gene	translation-rna	+	112534	112614	80
ccsA	gene	other	+	112698	113670	972
ndhD	gene	nad-dehydrogenase	−	113852	115373	1521
psaC	gene	photosystem-i	−	115471	115717	246
ndhE	gene	nad-dehydrogenase	−	115979	116285	306
ndhG	gene	nad-dehydrogenase	−	116506	117037	531
ndhI	gene	nad-dehydrogenase	−	117415	117913	498
ndhA	gene	nad-dehydrogenase	−	117999	120159	2160
ndhH	gene	nad-dehydrogenase	−	120160	121342	1182
rps15	gene	ribosomal-protein	−	121442	121715	273
ycf1	gene	other	−	122095	127648	5553
trnN-GUU	gene	translation-rna	+	127973	128045	72
trnR-ACG	gene	translation-rna	−	128611	128690	79
rrn5	gene	ribosomal-rna	−	128919	129040	121
rrn4.5	gene	ribosomal-rna	−	129295	129398	103
rrn23	gene	ribosomal-rna	−	129496	132307	2811
trnA-UGC	gene	translation-rna	−	132498	133377	879
trnI-GAU	gene	translation-rna	−	133441	134450	1009
rrn16	gene	ribosomal-rna	−	134739	136230	1491
trnV-GAC	gene	translation-rna	−	136457	136529	72
rps7	gene	ribosomal-protein	+	138992	139460	468
ndhB	gene	nad-dehydrogenase	+	139734	141946	2212
trnL-CAA	gene	translation-rna	+	142485	142566	81
ycf15	gene	other	−	142826	143075	249
ycf2	gene	other	−	143117	149984	6867
trnI-CAU	gene	translation-rna	+	150072	150146	74
rpl23	gene	ribosomal-protein	+	150311	150593	282
rpl2	gene	ribosomal-protein	+	150611	152103	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ231107.1DNA · accDPQ231107DNA · atpBPQ231107DNA · matKPQ231107DNA · ndhFPQ231107DNA · psbAPQ231107DNA · rbcLPQ231107DNA · rps12PQ231107DNA · ycf1PQ231107