Coordinate-aware organelle record

Phlomis fruticosa chloroplast genome

Available NC_065868.1 151,639 bp 150 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbycf1 · gene · 1-151,639 bp · − strandtrnN-GUU · gene · 1,379-1,452 bp · + strandtrnN-GUU · gene · 1,380-1,451 bp · + strandtrnR-ACG · gene · 2,023-2,097 bp · − strandtrnR-ACG · gene · 2,024-2,097 bp · − strandrrn5 · gene · 2,332-2,452 bp · − strandrrn4.5 · gene · 2,708-2,810 bp · − strandrrn23 · gene · 2,909-5,719 bp · − strandtrnA-UGC · gene · 5,916-6,794 bp · − strandtrnI-GAU · gene · 6,859-7,867 bp · − strandrrn16 · gene · 8,187-9,677 bp · − strandtrnV-GAC · gene · 9,900-9,971 bp · − strandrps12 · gene · 11,587-94,601 bp · + strandrps7 · gene · 12,434-12,901 bp · + strandndhB · gene · 13,165-15,371 bp · + strandtrnL-CAA · gene · 15,915-15,997 bp · + strandtrnL-CAA · gene · 15,916-15,996 bp · + strandycf2 · gene · 16,543-23,382 bp · − strandtrnI-CAU · gene · 23,471-23,544 bp · + strandtrnM-CAU · gene · 23,471-23,545 bp · + strandrpl23 · gene · 23,710-23,991 bp · + strandrpl2 · gene · 24,010-25,501 bp · + strandtrnH-GUG · gene · 25,602-25,676 bp · − strandtrnH-GUG · gene · 25,603-25,676 bp · − strandtrnH-GUG · gene · 25,603-25,677 bp · − strandpsbA · gene · 25,907-26,965 bp · − strandtrnK-UUU · gene · 27,195-29,780 bp · − strandtrnK-UUU · gene · 27,198-29,780 bp · − strandmatK · gene · 27,496-29,031 bp · − strandrps16 · gene · 30,561-31,680 bp · − strandtrnQ-UUG · gene · 32,672-32,744 bp · − strandtrnQ-UUG · gene · 32,673-32,744 bp · − strandpsbK · gene · 33,081-33,266 bp · + strandpsbI · gene · 33,649-33,759 bp · + strandtrnS-GCU · gene · 33,876-33,963 bp · − strandtrnS-CGA · gene · 34,531-35,284 bp · + strandtrnG-UCC · gene · 34,532-35,283 bp · + strandtrnR-UCU · gene · 35,460-35,531 bp · + strandatpA · gene · 35,628-37,151 bp · − strandatpF · gene · 37,238-38,446 bp · − strandatpH · gene · 38,807-39,052 bp · − strandatpI · gene · 40,039-40,782 bp · − strandrps2 · gene · 41,013-41,723 bp · − strandrpoC2 · gene · 41,942-46,120 bp · − strandrpoC1 · gene · 46,287-49,123 bp · − strandrpoB · gene · 49,150-52,362 bp · − strandtrnC-GCA · gene · 53,502-53,572 bp · + strandpetN · gene · 54,410-54,499 bp · + strandpsbM · gene · 55,297-55,401 bp · − strandtrnD-GUC · gene · 55,931-56,007 bp · − strandtrnD-GUC · gene · 55,933-56,006 bp · − strandtrnY-GUA · gene · 56,119-56,204 bp · − strandtrnY-GUA · gene · 56,120-56,203 bp · − strandtrnE-UUC · gene · 56,263-56,335 bp · − strandtrnT-GGU · gene · 56,922-56,995 bp · + strandtrnT-GGU · gene · 56,923-56,994 bp · + strandpsbD · gene · 58,184-59,245 bp · + strandpsbC · gene · 59,193-60,614 bp · + strandtrnS-UGA · gene · 60,848-60,940 bp · − strandpsbZ · gene · 61,265-61,453 bp · + strandtrnG-GCC · gene · 61,684-61,754 bp · + strandtrnM-CAU · gene · 61,907-61,981 bp · − strandtrnfM-CAU · gene · 61,908-61,981 bp · − strandrps14 · gene · 62,131-62,433 bp · − strandpsaB · gene · 62,561-64,765 bp · − strandpsaA · gene · 64,791-67,043 bp · − strandpafI · gene · 67,769-69,705 bp · − strandtrnS-GGA · gene · 70,022-70,108 bp · + strandrps4 · gene · 70,393-70,998 bp · − strandtrnT-UGU · gene · 71,387-71,461 bp · − strandtrnT-UGU · gene · 71,388-71,460 bp · − strandtrnL-UAA · gene · 72,128-72,700 bp · + strandtrnF-GAA · gene · 72,978-73,051 bp · + strandndhJ · gene · 73,745-74,221 bp · − strandndhK · gene · 74,322-75,062 bp · − strandndhC · gene · 75,053-75,415 bp · − strandtrnV-UAC · gene · 76,364-77,011 bp · − strandtrnV-UAC · gene · 76,365-77,011 bp · − strandtrnM-CAU · gene · 77,200-77,272 bp · + strandatpE · gene · 77,490-77,891 bp · − strandatpB · gene · 77,888-79,384 bp · − strandrbcL · gene · 80,193-81,638 bp · + strandaccD · gene · 82,334-83,800 bp · + strandpsaI · gene · 84,513-84,623 bp · + strandpafII · gene · 85,056-85,610 bp · + strandcemA · gene · 86,171-86,860 bp · + strandpetA · gene · 87,077-88,039 bp · + strandpsbJ · gene · 89,035-89,157 bp · − strandpsbL · gene · 89,295-89,411 bp · − strandpsbF · gene · 89,435-89,554 bp · − strandpsbE · gene · 89,569-89,820 bp · − strandpetL · gene · 90,745-90,840 bp · + strandpetG · gene · 91,020-91,133 bp · + strandtrnW-CCA · gene · 91,254-91,327 bp · − strandtrnP-UGG · gene · 91,488-91,563 bp · − strandtrnP-UGG · gene · 91,490-91,563 bp · − strandpsaJ · gene · 91,837-91,971 bp · + strandrpl33 · gene · 92,444-92,644 bp · + strandrps18 · gene · 92,792-93,097 bp · + strandrpl20 · gene · 93,342-93,728 bp · − strandrps12 · gene · 94,488-122,585 bp · − strandclpP1 · gene · 94,728-96,597 bp · − strandpsbB · gene · 97,029-98,555 bp · + strandpsbT · gene · 98,746-98,847 bp · + strandpbf1 · gene · 98,921-99,052 bp · − strandpsbH · gene · 99,156-99,377 bp · + strandpetB · gene · 99,502-100,877 bp · + strandpetD · gene · 101,072-102,291 bp · + strandrpoA · gene · 102,454-103,467 bp · − strandrps11 · gene · 103,539-103,955 bp · − strandrpl36 · gene · 104,058-104,171 bp · − strandinfA · gene · 104,267-104,500 bp · − strandrps8 · gene · 104,623-105,036 bp · − strandrpl14 · gene · 105,209-105,577 bp · − strandrpl16 · gene · 105,704-107,007 bp · − strandrps3 · gene · 107,163-107,825 bp · − strandrpl22 · gene · 107,810-108,274 bp · − strandrps19 · gene · 108,334-108,612 bp · − strandrpl2 · gene · 108,671-110,162 bp · − strandrpl23 · gene · 110,181-110,462 bp · − strandtrnM-CAU · gene · 110,627-110,701 bp · − strandtrnI-CAU · gene · 110,628-110,701 bp · − strandycf2 · gene · 110,790-117,629 bp · + strandtrnL-CAA · gene · 118,175-118,257 bp · − strandtrnL-CAA · gene · 118,176-118,256 bp · − strandndhB · gene · 118,801-121,007 bp · − strandrps7 · gene · 121,271-121,738 bp · − strandtrnV-GAC · gene · 124,201-124,272 bp · + strandrrn16 · gene · 124,495-125,985 bp · + strandtrnI-GAU · gene · 126,305-127,313 bp · + strandtrnA-UGC · gene · 127,378-128,256 bp · + strandrrn23 · gene · 128,453-131,263 bp · + strandrrn4.5 · gene · 131,362-131,464 bp · + strandrrn5 · gene · 131,720-131,840 bp · + strandtrnR-ACG · gene · 132,075-132,148 bp · + strandtrnR-ACG · gene · 132,075-132,149 bp · + strandtrnN-GUU · gene · 132,720-132,793 bp · − strandtrnN-GUU · gene · 132,721-132,792 bp · − strandycf1 · gene · 133,118-134,236 bp · + strandndhF · gene · 134,182-136,404 bp · − strandrpl32 · gene · 136,923-137,099 bp · + strandtrnL-UAG · gene · 137,577-137,656 bp · + strandccsA · gene · 137,741-138,712 bp · + strandpsaC · gene · 140,515-140,760 bp · − strandndhE · gene · 141,042-141,347 bp · − strandndhG · gene · 141,563-142,093 bp · − strandndhI · gene · 142,483-142,989 bp · − strandndhA · gene · 143,076-145,235 bp · − strandndhH · gene · 145,237-146,418 bp · − strandrps15 · gene · 146,519-146,791 bp · − strandPhlomis fruticosaANNOTATED PLASTOMENC_065868.1151,639 bp · 150 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionOtherTranslation RnaRibosomal RnaRibosomal ProteinNad DehydrogenasePhotosystem IiAtp SynthaseRna PolymeraseCytochromePhotosystem IVerified annotationSource: NCBI GenBankAccession: NC_065868.1Features: 150 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

150 features
GeneTypeGroupStrandStartEndLength
ycf1geneother−0151639151639
trnN-GUUgenetranslation-rna+1378145274
trnN-GUUgenetranslation-rna+1379145172
trnR-ACGgenetranslation-rna−2022209775
trnR-ACGgenetranslation-rna−2023209774
rrn5generibosomal-rna−23312452121
rrn4.5generibosomal-rna−27072810103
rrn23generibosomal-rna−290857192811
trnA-UGCgenetranslation-rna−59156794879
trnI-GAUgenetranslation-rna−685878671009
rrn16generibosomal-rna−818696771491
trnV-GACgenetranslation-rna−9899997172
rps12generibosomal-protein+115869460183015
rps7generibosomal-protein+1243312901468
ndhBgenenad-dehydrogenase+13164153712207
trnL-CAAgenetranslation-rna+159141599783
trnL-CAAgenetranslation-rna+159151599681
ycf2geneother−16542233826840
trnI-CAUgenetranslation-rna+234702354474
trnM-CAUgenetranslation-rna+234702354575
rpl23generibosomal-protein+2370923991282
rpl2generibosomal-protein+24009255011492
trnH-GUGgenetranslation-rna−256012567675
trnH-GUGgenetranslation-rna−256022567674
trnH-GUGgenetranslation-rna−256022567775
psbAgenephotosystem-ii−25906269651059
trnK-UUUgenetranslation-rna−27194297802586
trnK-UUUgenetranslation-rna−27197297802583
matKgeneother−27495290311536
rps16generibosomal-protein−30560316801120
trnQ-UUGgenetranslation-rna−326713274473
trnQ-UUGgenetranslation-rna−326723274472
psbKgenephotosystem-ii+3308033266186
psbIgenephotosystem-ii+3364833759111
trnS-GCUgenetranslation-rna−338753396388
trnS-CGAgenetranslation-rna+3453035284754
trnG-UCCgenetranslation-rna+3453135283752
trnR-UCUgenetranslation-rna+354593553172
atpAgeneatp-synthase−35627371511524
atpFgeneatp-synthase−37237384461209
atpHgeneatp-synthase−3880639052246
atpIgeneatp-synthase−4003840782744
rps2generibosomal-protein−4101241723711
rpoC2generna-polymerase−41941461204179
rpoC1generna-polymerase−46286491232837
rpoBgenerna-polymerase−49149523623213
trnC-GCAgenetranslation-rna+535015357271
petNgenecytochrome+544095449990
psbMgenephotosystem-ii−5529655401105
trnD-GUCgenetranslation-rna−559305600777
trnD-GUCgenetranslation-rna−559325600674
trnY-GUAgenetranslation-rna−561185620486
trnY-GUAgenetranslation-rna−561195620384
trnE-UUCgenetranslation-rna−562625633573
trnT-GGUgenetranslation-rna+569215699574
trnT-GGUgenetranslation-rna+569225699472
psbDgenephotosystem-ii+58183592451062
psbCgenephotosystem-ii+59192606141422
trnS-UGAgenetranslation-rna−608476094093
psbZgenephotosystem-ii+6126461453189
trnG-GCCgenetranslation-rna+616836175471
trnM-CAUgenetranslation-rna−619066198175
trnfM-CAUgenetranslation-rna−619076198174
rps14generibosomal-protein−6213062433303
psaBgenephotosystem-i−62560647652205
psaAgenephotosystem-i−64790670432253
pafIgeneother−67768697051937
trnS-GGAgenetranslation-rna+700217010887
rps4generibosomal-protein−7039270998606
trnT-UGUgenetranslation-rna−713867146175
trnT-UGUgenetranslation-rna−713877146073
trnL-UAAgenetranslation-rna+7212772700573
trnF-GAAgenetranslation-rna+729777305174
ndhJgenenad-dehydrogenase−7374474221477
ndhKgenenad-dehydrogenase−7432175062741
ndhCgenenad-dehydrogenase−7505275415363
trnV-UACgenetranslation-rna−7636377011648
trnV-UACgenetranslation-rna−7636477011647
trnM-CAUgenetranslation-rna+771997727273
atpEgeneatp-synthase−7748977891402
atpBgeneatp-synthase−77887793841497
rbcLgeneother+80192816381446
accDgeneother+82333838001467
psaIgenephotosystem-i+8451284623111
pafIIgeneother+8505585610555
cemAgeneother+8617086860690
petAgenecytochrome+8707688039963
psbJgenephotosystem-ii−8903489157123
psbLgenephotosystem-ii−8929489411117
psbFgenephotosystem-ii−8943489554120
psbEgenephotosystem-ii−8956889820252
petLgenecytochrome+907449084096
petGgenecytochrome+9101991133114
trnW-CCAgenetranslation-rna−912539132774
trnP-UGGgenetranslation-rna−914879156376
trnP-UGGgenetranslation-rna−914899156374
psaJgenephotosystem-i+9183691971135
rpl33generibosomal-protein+9244392644201
rps18generibosomal-protein+9279193097306
rpl20generibosomal-protein−9334193728387
rps12generibosomal-protein−9448712258528098
clpP1geneother−94727965971870
psbBgenephotosystem-ii+97028985551527
psbTgenephotosystem-ii+9874598847102
pbf1geneother−9892099052132
psbHgenephotosystem-ii+9915599377222
petBgenecytochrome+995011008771376
petDgenecytochrome+1010711022911220
rpoAgenerna-polymerase−1024531034671014
rps11generibosomal-protein−103538103955417
rpl36generibosomal-protein−104057104171114
infAgeneother−104266104500234
rps8generibosomal-protein−104622105036414
rpl14generibosomal-protein−105208105577369
rpl16generibosomal-protein−1057031070071304
rps3generibosomal-protein−107162107825663
rpl22generibosomal-protein−107809108274465
rps19generibosomal-protein−108333108612279
rpl2generibosomal-protein−1086701101621492
rpl23generibosomal-protein−110180110462282
trnM-CAUgenetranslation-rna−11062611070175
trnI-CAUgenetranslation-rna−11062711070174
ycf2geneother+1107891176296840
trnL-CAAgenetranslation-rna−11817411825783
trnL-CAAgenetranslation-rna−11817511825681
ndhBgenenad-dehydrogenase−1188001210072207
rps7generibosomal-protein−121270121738468
trnV-GACgenetranslation-rna+12420012427272
rrn16generibosomal-rna+1244941259851491
trnI-GAUgenetranslation-rna+1263041273131009
trnA-UGCgenetranslation-rna+127377128256879
rrn23generibosomal-rna+1284521312632811
rrn4.5generibosomal-rna+131361131464103
rrn5generibosomal-rna+131719131840121
trnR-ACGgenetranslation-rna+13207413214874
trnR-ACGgenetranslation-rna+13207413214975
trnN-GUUgenetranslation-rna−13271913279374
trnN-GUUgenetranslation-rna−13272013279272
ycf1geneother+1331171342361119
ndhFgenenad-dehydrogenase−1341811364042223
rpl32generibosomal-protein+136922137099177
trnL-UAGgenetranslation-rna+13757613765680
ccsAgeneother+137740138712972
psaCgenephotosystem-i−140514140760246
ndhEgenenad-dehydrogenase−141041141347306
ndhGgenenad-dehydrogenase−141562142093531
ndhIgenenad-dehydrogenase−142482142989507
ndhAgenenad-dehydrogenase−1430751452352160
ndhHgenenad-dehydrogenase−1452361464181182
rps15generibosomal-protein−146518146791273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources