Phlomis fruticosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
ycf1 · NC_065868.1 · 1–1,054 bp · −
ycf1 · NC_065868.1 · 147,174–151,639 bp · −
trnR-ACG · NC_065868.1 · 2,023–2,097 bp · −
trnR-ACG · NC_065868.1 · 2,024–2,097 bp · −
rrn5 · NC_065868.1 · 2,332–2,452 bp · −
rrn4.5 · NC_065868.1 · 2,708–2,810 bp · −
rrn23 · NC_065868.1 · 2,909–5,719 bp · −
trnA-UGC · NC_065868.1 · 5,916–6,794 bp · −
trnI-GAU · NC_065868.1 · 6,859–7,867 bp · −
rrn16 · NC_065868.1 · 8,187–9,677 bp · −
trnV-GAC · NC_065868.1 · 9,900–9,971 bp · −
rps12 · NC_065868.1 · 94,488–94,601 bp · −
ycf2 · NC_065868.1 · 16,543–23,382 bp · −
trnH-GUG · NC_065868.1 · 25,602–25,676 bp · −
trnH-GUG · NC_065868.1 · 25,603–25,676 bp · −
trnH-GUG · NC_065868.1 · 25,603–25,677 bp · −
psbA · NC_065868.1 · 25,907–26,965 bp · −
trnK-UUU · NC_065868.1 · 27,195–29,780 bp · −
trnK-UUU · NC_065868.1 · 27,198–29,780 bp · −
matK · NC_065868.1 · 27,496–29,031 bp · −
rps16 · NC_065868.1 · 30,561–31,680 bp · −
trnQ-UUG · NC_065868.1 · 32,672–32,744 bp · −
trnQ-UUG · NC_065868.1 · 32,673–32,744 bp · −
trnS-GCU · NC_065868.1 · 33,876–33,963 bp · −
atpA · NC_065868.1 · 35,628–37,151 bp · −
atpF · NC_065868.1 · 37,238–38,446 bp · −
atpH · NC_065868.1 · 38,807–39,052 bp · −
atpI · NC_065868.1 · 40,039–40,782 bp · −
rps2 · NC_065868.1 · 41,013–41,723 bp · −
rpoC2 · NC_065868.1 · 41,942–46,120 bp · −
rpoC1 · NC_065868.1 · 46,287–49,123 bp · −
rpoB · NC_065868.1 · 49,150–52,362 bp · −
psbM · NC_065868.1 · 55,297–55,401 bp · −
trnD-GUC · NC_065868.1 · 55,931–56,007 bp · −
trnD-GUC · NC_065868.1 · 55,933–56,006 bp · −
trnY-GUA · NC_065868.1 · 56,119–56,204 bp · −
trnY-GUA · NC_065868.1 · 56,120–56,203 bp · −
trnE-UUC · NC_065868.1 · 56,263–56,335 bp · −
trnS-UGA · NC_065868.1 · 60,848–60,940 bp · −
trnM-CAU · NC_065868.1 · 61,907–61,981 bp · −
trnfM-CAU · NC_065868.1 · 61,908–61,981 bp · −
rps14 · NC_065868.1 · 62,131–62,433 bp · −
psaB · NC_065868.1 · 62,561–64,765 bp · −
psaA · NC_065868.1 · 64,791–67,043 bp · −
pafI · NC_065868.1 · 67,769–69,705 bp · −
rps4 · NC_065868.1 · 70,393–70,998 bp · −
trnT-UGU · NC_065868.1 · 71,387–71,461 bp · −
trnT-UGU · NC_065868.1 · 71,388–71,460 bp · −
ndhJ · NC_065868.1 · 73,745–74,221 bp · −
ndhK · NC_065868.1 · 74,322–75,062 bp · −
ndhC · NC_065868.1 · 75,053–75,415 bp · −
trnV-UAC · NC_065868.1 · 76,364–77,011 bp · −
trnV-UAC · NC_065868.1 · 76,365–77,011 bp · −
atpE · NC_065868.1 · 77,490–77,891 bp · −
atpB · NC_065868.1 · 77,888–79,384 bp · −
psbJ · NC_065868.1 · 89,035–89,157 bp · −
psbL · NC_065868.1 · 89,295–89,411 bp · −
psbF · NC_065868.1 · 89,435–89,554 bp · −
psbE · NC_065868.1 · 89,569–89,820 bp · −
trnW-CCA · NC_065868.1 · 91,254–91,327 bp · −
trnP-UGG · NC_065868.1 · 91,488–91,563 bp · −
trnP-UGG · NC_065868.1 · 91,490–91,563 bp · −
rpl20 · NC_065868.1 · 93,342–93,728 bp · −
rps12 · NC_065868.1 · 121,792–122,585 bp · −
clpP1 · NC_065868.1 · 94,728–96,597 bp · −
pbf1 · NC_065868.1 · 98,921–99,052 bp · −
rpoA · NC_065868.1 · 102,454–103,467 bp · −
rps11 · NC_065868.1 · 103,539–103,955 bp · −
rpl36 · NC_065868.1 · 104,058–104,171 bp · −
infA · NC_065868.1 · 104,267–104,500 bp · −
rps8 · NC_065868.1 · 104,623–105,036 bp · −
rpl14 · NC_065868.1 · 105,209–105,577 bp · −
rpl16 · NC_065868.1 · 105,704–107,007 bp · −
rps3 · NC_065868.1 · 107,163–107,825 bp · −
rpl22 · NC_065868.1 · 107,810–108,274 bp · −
rps19 · NC_065868.1 · 108,334–108,612 bp · −
rpl2 · NC_065868.1 · 108,671–110,162 bp · −
rpl23 · NC_065868.1 · 110,181–110,462 bp · −
trnM-CAU · NC_065868.1 · 110,627–110,701 bp · −
trnI-CAU · NC_065868.1 · 110,628–110,701 bp · −
trnL-CAA · NC_065868.1 · 118,175–118,257 bp · −
trnL-CAA · NC_065868.1 · 118,176–118,256 bp · −
ndhB · NC_065868.1 · 118,801–121,007 bp · −
rps7 · NC_065868.1 · 121,271–121,738 bp · −
trnN-GUU · NC_065868.1 · 132,720–132,793 bp · −
trnN-GUU · NC_065868.1 · 132,721–132,792 bp · −
ndhF · NC_065868.1 · 134,182–136,404 bp · −
psaC · NC_065868.1 · 140,515–140,760 bp · −
ndhE · NC_065868.1 · 141,042–141,347 bp · −
ndhG · NC_065868.1 · 141,563–142,093 bp · −
ndhI · NC_065868.1 · 142,483–142,989 bp · −
ndhA · NC_065868.1 · 143,076–145,235 bp · −
ndhH · NC_065868.1 · 145,237–146,418 bp · −
rps15 · NC_065868.1 · 146,519–146,791 bp · −
trnN-GUU · NC_065868.1 · 1,379–1,452 bp · +
trnN-GUU · NC_065868.1 · 1,380–1,451 bp · +
rps12 · NC_065868.1 · 11,587–12,380 bp · +
rps7 · NC_065868.1 · 12,434–12,901 bp · +
ndhB · NC_065868.1 · 13,165–15,371 bp · +
trnL-CAA · NC_065868.1 · 15,915–15,997 bp · +
trnL-CAA · NC_065868.1 · 15,916–15,996 bp · +
trnI-CAU · NC_065868.1 · 23,471–23,544 bp · +
trnM-CAU · NC_065868.1 · 23,471–23,545 bp · +
rpl23 · NC_065868.1 · 23,710–23,991 bp · +
rpl2 · NC_065868.1 · 24,010–25,501 bp · +
psbK · NC_065868.1 · 33,081–33,266 bp · +
psbI · NC_065868.1 · 33,649–33,759 bp · +
trnS-CGA · NC_065868.1 · 34,531–35,284 bp · +
trnG-UCC · NC_065868.1 · 34,532–35,283 bp · +
trnR-UCU · NC_065868.1 · 35,460–35,531 bp · +
trnC-GCA · NC_065868.1 · 53,502–53,572 bp · +
petN · NC_065868.1 · 54,410–54,499 bp · +
trnT-GGU · NC_065868.1 · 56,922–56,995 bp · +
trnT-GGU · NC_065868.1 · 56,923–56,994 bp · +
psbD · NC_065868.1 · 58,184–59,245 bp · +
psbC · NC_065868.1 · 59,193–60,614 bp · +
psbZ · NC_065868.1 · 61,265–61,453 bp · +
trnG-GCC · NC_065868.1 · 61,684–61,754 bp · +
trnS-GGA · NC_065868.1 · 70,022–70,108 bp · +
trnL-UAA · NC_065868.1 · 72,128–72,700 bp · +
trnF-GAA · NC_065868.1 · 72,978–73,051 bp · +
trnM-CAU · NC_065868.1 · 77,200–77,272 bp · +
rbcL · NC_065868.1 · 80,193–81,638 bp · +
accD · NC_065868.1 · 82,334–83,800 bp · +
psaI · NC_065868.1 · 84,513–84,623 bp · +
pafII · NC_065868.1 · 85,056–85,610 bp · +
cemA · NC_065868.1 · 86,171–86,860 bp · +
petA · NC_065868.1 · 87,077–88,039 bp · +
petL · NC_065868.1 · 90,745–90,840 bp · +
petG · NC_065868.1 · 91,020–91,133 bp · +
psaJ · NC_065868.1 · 91,837–91,971 bp · +
rpl33 · NC_065868.1 · 92,444–92,644 bp · +
rps18 · NC_065868.1 · 92,792–93,097 bp · +
psbB · NC_065868.1 · 97,029–98,555 bp · +
psbT · NC_065868.1 · 98,746–98,847 bp · +
psbH · NC_065868.1 · 99,156–99,377 bp · +
petB · NC_065868.1 · 99,502–100,877 bp · +
petD · NC_065868.1 · 101,072–102,291 bp · +
ycf2 · NC_065868.1 · 110,790–117,629 bp · +
trnV-GAC · NC_065868.1 · 124,201–124,272 bp · +
rrn16 · NC_065868.1 · 124,495–125,985 bp · +
trnI-GAU · NC_065868.1 · 126,305–127,313 bp · +
trnA-UGC · NC_065868.1 · 127,378–128,256 bp · +
rrn23 · NC_065868.1 · 128,453–131,263 bp · +
rrn4.5 · NC_065868.1 · 131,362–131,464 bp · +
rrn5 · NC_065868.1 · 131,720–131,840 bp · +
trnR-ACG · NC_065868.1 · 132,075–132,148 bp · +
trnR-ACG · NC_065868.1 · 132,075–132,149 bp · +
ycf1 · NC_065868.1 · 133,118–134,236 bp · +
rpl32 · NC_065868.1 · 136,923–137,099 bp · +
trnL-UAG · NC_065868.1 · 137,577–137,656 bp · +
ccsA · NC_065868.1 · 137,741–138,712 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Phlomis fruticosa
ANNOTATED PLASTOME
NC_065868.1
151,639 bp · 150 genes
Gene function
Other
Transfer RNA
Ribosomal RNA
Ribosomal protein
NADH dehydrogenase
Photosystem II
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
0 37910 75820 113729 151639 bp
Forward strand 5′ → 3′
trnN-GUU trnN-GUU rps12 rps7 ndhB trnL-CAA trnL-CAA trnI-CAU trnM-CAU rpl23 rpl2 psbK psbI trnS-CGA trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG trnR-ACG ycf1 rpl32 trnL-UAG ccsA
ycf1 trnR-ACG trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2 trnH-GUG trnH-GUG trnH-GUG psbA trnK-UUU trnK-UUU matK rps16 trnQ-UUG trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnD-GUC trnY-GUA trnY-GUA trnE-UUC trnS-UGA trnM-CAU trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU trnT-UGU ndhJ ndhK ndhC trnV-UAC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnI-CAU trnL-CAA trnL-CAA ndhB rps7 rps12 trnN-GUU trnN-GUU ndhF psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
152 local segments
Gene Type Group Strand Start End Length
ycf1 gene − 1 1054 1054 Locate
trnN-GUU gene + 1379 1452 74 Locate
trnN-GUU gene + 1380 1451 72 Locate
trnR-ACG gene − 2023 2097 75 Locate
trnR-ACG gene − 2024 2097 74 Locate
rrn5 gene − 2332 2452 121 Locate
rrn4.5 gene − 2708 2810 103 Locate
rrn23 gene − 2909 5719 2811 Locate
trnA-UGC gene − 5916 6794 879 Locate
trnI-GAU gene − 6859 7867 1009 Locate
rrn16 gene − 8187 9677 1491 Locate
trnV-GAC gene − 9900 9971 72 Locate
rps12 gene + 11587 12380 794 Locate
rps7 gene + 12434 12901 468 Locate
ndhB gene + 13165 15371 2207 Locate
trnL-CAA gene + 15915 15997 83 Locate
trnL-CAA gene + 15916 15996 81 Locate
ycf2 gene − 16543 23382 6840 Locate
trnI-CAU gene + 23471 23544 74 Locate
trnM-CAU gene + 23471 23545 75 Locate
rpl23 gene + 23710 23991 282 Locate
rpl2 gene + 24010 25501 1492 Locate
trnH-GUG gene − 25602 25676 75 Locate
trnH-GUG gene − 25603 25676 74 Locate
trnH-GUG gene − 25603 25677 75 Locate
psbA gene − 25907 26965 1059 Locate
trnK-UUU gene − 27195 29780 2586 Locate
trnK-UUU gene − 27198 29780 2583 Locate
matK gene − 27496 29031 1536 Locate
rps16 gene − 30561 31680 1120 Locate
trnQ-UUG gene − 32672 32744 73 Locate
trnQ-UUG gene − 32673 32744 72 Locate
psbK gene + 33081 33266 186 Locate
psbI gene + 33649 33759 111 Locate
trnS-GCU gene − 33876 33963 88 Locate
trnS-CGA gene + 34531 35284 754 Locate
trnG-UCC gene + 34532 35283 752 Locate
trnR-UCU gene + 35460 35531 72 Locate
atpA gene − 35628 37151 1524 Locate
atpF gene − 37238 38446 1209 Locate
atpH gene − 38807 39052 246 Locate
atpI gene − 40039 40782 744 Locate
rps2 gene − 41013 41723 711 Locate
rpoC2 gene − 41942 46120 4179 Locate
rpoC1 gene − 46287 49123 2837 Locate
rpoB gene − 49150 52362 3213 Locate
trnC-GCA gene + 53502 53572 71 Locate
petN gene + 54410 54499 90 Locate
psbM gene − 55297 55401 105 Locate
trnD-GUC gene − 55931 56007 77 Locate
trnD-GUC gene − 55933 56006 74 Locate
trnY-GUA gene − 56119 56204 86 Locate
trnY-GUA gene − 56120 56203 84 Locate
trnE-UUC gene − 56263 56335 73 Locate
trnT-GGU gene + 56922 56995 74 Locate
trnT-GGU gene + 56923 56994 72 Locate
psbD gene + 58184 59245 1062 Locate
psbC gene + 59193 60614 1422 Locate
trnS-UGA gene − 60848 60940 93 Locate
psbZ gene + 61265 61453 189 Locate
trnG-GCC gene + 61684 61754 71 Locate
trnM-CAU gene − 61907 61981 75 Locate
trnfM-CAU gene − 61908 61981 74 Locate
rps14 gene − 62131 62433 303 Locate
psaB gene − 62561 64765 2205 Locate
psaA gene − 64791 67043 2253 Locate
pafI gene − 67769 69705 1937 Locate
trnS-GGA gene + 70022 70108 87 Locate
rps4 gene − 70393 70998 606 Locate
trnT-UGU gene − 71387 71461 75 Locate
trnT-UGU gene − 71388 71460 73 Locate
trnL-UAA gene + 72128 72700 573 Locate
trnF-GAA gene + 72978 73051 74 Locate
ndhJ gene − 73745 74221 477 Locate
ndhK gene − 74322 75062 741 Locate
ndhC gene − 75053 75415 363 Locate
trnV-UAC gene − 76364 77011 648 Locate
trnV-UAC gene − 76365 77011 647 Locate
trnM-CAU gene + 77200 77272 73 Locate
atpE gene − 77490 77891 402 Locate
atpB gene − 77888 79384 1497 Locate
rbcL gene + 80193 81638 1446 Locate
accD gene + 82334 83800 1467 Locate
psaI gene + 84513 84623 111 Locate
pafII gene + 85056 85610 555 Locate
cemA gene + 86171 86860 690 Locate
petA gene + 87077 88039 963 Locate
psbJ gene − 89035 89157 123 Locate
psbL gene − 89295 89411 117 Locate
psbF gene − 89435 89554 120 Locate
psbE gene − 89569 89820 252 Locate
petL gene + 90745 90840 96 Locate
petG gene + 91020 91133 114 Locate
trnW-CCA gene − 91254 91327 74 Locate
trnP-UGG gene − 91488 91563 76 Locate
trnP-UGG gene − 91490 91563 74 Locate
psaJ gene + 91837 91971 135 Locate
rpl33 gene + 92444 92644 201 Locate
rps18 gene + 92792 93097 306 Locate
rpl20 gene − 93342 93728 387 Locate
rps12 gene − 94488 94601 114 Locate
clpP1 gene − 94728 96597 1870 Locate
psbB gene + 97029 98555 1527 Locate
psbT gene + 98746 98847 102 Locate
pbf1 gene − 98921 99052 132 Locate
psbH gene + 99156 99377 222 Locate
petB gene + 99502 100877 1376 Locate
petD gene + 101072 102291 1220 Locate
rpoA gene − 102454 103467 1014 Locate
rps11 gene − 103539 103955 417 Locate
rpl36 gene − 104058 104171 114 Locate
infA gene − 104267 104500 234 Locate
rps8 gene − 104623 105036 414 Locate
rpl14 gene − 105209 105577 369 Locate
rpl16 gene − 105704 107007 1304 Locate
rps3 gene − 107163 107825 663 Locate
rpl22 gene − 107810 108274 465 Locate
rps19 gene − 108334 108612 279 Locate
rpl2 gene − 108671 110162 1492 Locate
rpl23 gene − 110181 110462 282 Locate
trnM-CAU gene − 110627 110701 75 Locate
trnI-CAU gene − 110628 110701 74 Locate
ycf2 gene + 110790 117629 6840 Locate
trnL-CAA gene − 118175 118257 83 Locate
trnL-CAA gene − 118176 118256 81 Locate
ndhB gene − 118801 121007 2207 Locate
rps7 gene − 121271 121738 468 Locate
rps12 gene − 121792 122585 794 Locate
trnV-GAC gene + 124201 124272 72 Locate
rrn16 gene + 124495 125985 1491 Locate
trnI-GAU gene + 126305 127313 1009 Locate
trnA-UGC gene + 127378 128256 879 Locate
rrn23 gene + 128453 131263 2811 Locate
rrn4.5 gene + 131362 131464 103 Locate
rrn5 gene + 131720 131840 121 Locate
trnR-ACG gene + 132075 132148 74 Locate
trnR-ACG gene + 132075 132149 75 Locate
trnN-GUU gene − 132720 132793 74 Locate
trnN-GUU gene − 132721 132792 72 Locate
ycf1 gene + 133118 134236 1119 Locate
ndhF gene − 134182 136404 2223 Locate
rpl32 gene + 136923 137099 177 Locate
trnL-UAG gene + 137577 137656 80 Locate
ccsA gene + 137741 138712 972 Locate
psaC gene − 140515 140760 246 Locate
ndhE gene − 141042 141347 306 Locate
ndhG gene − 141563 142093 531 Locate
ndhI gene − 142483 142989 507 Locate
ndhA gene − 143076 145235 2160 Locate
ndhH gene − 145237 146418 1182 Locate
rps15 gene − 146519 146791 273 Locate
ycf1 gene − 147174 151639 4466 Locate
Status Available
Accession NC_065868.1
Length 151,639 bp
GC content 38.6%
Annotated genes 150
Gene sequence records 8
Other 15 Translation Rna 57 Ribosomal Rna 8 Ribosomal Protein 26 Nad Dehydrogenase 11 Photosystem Ii 14 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources