Phlomoides anisochila chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV929680.1 · 2–76 bp · −
psbA · PV929680.1 · 323–1,381 bp · −
trnK-UUU · PV929680.1 · 1,614–4,202 bp · −
matK · PV929680.1 · 1,918–3,453 bp · −
rps16 · PV929680.1 · 5,125–6,264 bp · −
trnQ-UUG · PV929680.1 · 7,259–7,330 bp · −
trnS-GCU · PV929680.1 · 8,451–8,538 bp · −
atpA · PV929680.1 · 10,212–11,735 bp · −
atpF · PV929680.1 · 11,824–13,085 bp · −
atpH · PV929680.1 · 13,451–13,696 bp · −
atpI · PV929680.1 · 14,687–15,430 bp · −
rps2 · PV929680.1 · 15,661–16,371 bp · −
rpoC2 · PV929680.1 · 16,692–20,765 bp · −
rpoC1 · PV929680.1 · 20,932–23,768 bp · −
rpoB · PV929680.1 · 23,795–27,007 bp · −
psbM · PV929680.1 · 29,900–30,004 bp · −
trnD-GUC · PV929680.1 · 30,541–30,614 bp · −
trnY-GUA · PV929680.1 · 30,728–30,811 bp · −
trnE-UUC · PV929680.1 · 30,871–30,943 bp · −
trnS-UGA · PV929680.1 · 35,509–35,601 bp · −
trnfM-CAU · PV929680.1 · 36,569–36,642 bp · −
rps14 · PV929680.1 · 36,792–37,094 bp · −
psaB · PV929680.1 · 37,222–39,426 bp · −
psaA · PV929680.1 · 39,452–41,704 bp · −
pafI · PV929680.1 · 42,437–44,375 bp · −
rps4 · PV929680.1 · 45,062–45,667 bp · −
trnT-UGU · PV929680.1 · 46,072–46,144 bp · −
ndhJ · PV929680.1 · 48,410–48,886 bp · −
ndhK · PV929680.1 · 48,992–49,732 bp · −
ndhC · PV929680.1 · 49,723–50,085 bp · −
trnV-UAC · PV929680.1 · 51,040–51,687 bp · −
atpE · PV929680.1 · 52,171–52,572 bp · −
atpB · PV929680.1 · 52,569–54,065 bp · −
psbJ · PV929680.1 · 63,718–63,840 bp · −
psbL · PV929680.1 · 63,978–64,094 bp · −
psbF · PV929680.1 · 64,118–64,237 bp · −
psbE · PV929680.1 · 64,252–64,503 bp · −
trnW-CCA · PV929680.1 · 65,644–65,717 bp · −
trnP-UGG · PV929680.1 · 65,880–65,953 bp · −
rpl20 · PV929680.1 · 67,700–68,086 bp · −
rps12 · PV929680.1 · 68,847–68,960 bp · −
rps12 · PV929680.1 · 96,154–96,947 bp · −
clpP1 · PV929680.1 · 69,087–70,963 bp · −
psbN · PV929680.1 · 73,287–73,418 bp · −
rpoA · PV929680.1 · 76,823–77,836 bp · −
rps11 · PV929680.1 · 77,908–78,324 bp · −
rpl36 · PV929680.1 · 78,427–78,540 bp · −
infA · PV929680.1 · 78,636–78,869 bp · −
rps8 · PV929680.1 · 78,994–79,407 bp · −
rpl14 · PV929680.1 · 79,575–79,943 bp · −
rpl16 · PV929680.1 · 80,070–81,376 bp · −
rps3 · PV929680.1 · 81,523–82,185 bp · −
rpl22 · PV929680.1 · 82,170–82,634 bp · −
rps19 · PV929680.1 · 82,693–82,971 bp · −
rpl2 · PV929680.1 · 83,024–84,515 bp · −
rpl23 · PV929680.1 · 84,534–84,815 bp · −
trnI-CAU · PV929680.1 · 84,981–85,054 bp · −
trnL-CAA · PV929680.1 · 92,522–92,602 bp · −
ndhB · PV929680.1 · 93,147–95,358 bp · −
rps7 · PV929680.1 · 95,633–96,100 bp · −
trnN-GUU · PV929680.1 · 107,045–107,116 bp · −
ndhF · PV929680.1 · 108,506–110,728 bp · −
ndhD · PV929680.1 · 113,255–114,757 bp · −
psaC · PV929680.1 · 114,888–115,133 bp · −
ndhE · PV929680.1 · 115,396–115,701 bp · −
ndhG · PV929680.1 · 115,916–116,446 bp · −
ndhI · PV929680.1 · 116,812–117,318 bp · −
ndhA · PV929680.1 · 117,405–119,568 bp · −
ndhH · PV929680.1 · 119,570–120,751 bp · −
rps15 · PV929680.1 · 120,852–121,124 bp · −
ycf1 · PV929680.1 · 121,505–126,997 bp · −
trnR-ACG · PV929680.1 · 127,966–128,039 bp · −
rrn5 · PV929680.1 · 128,274–128,394 bp · −
rrn4.5 · PV929680.1 · 128,650–128,752 bp · −
rrn23 · PV929680.1 · 128,851–131,661 bp · −
trnA-UGC · PV929680.1 · 131,853–132,731 bp · −
trnI-GAU · PV929680.1 · 132,796–133,803 bp · −
rrn16 · PV929680.1 · 134,093–135,583 bp · −
trnV-GAC · PV929680.1 · 135,811–135,882 bp · −
ycf2 · PV929680.1 · 142,469–149,296 bp · −
psbK · PV929680.1 · 7,667–7,852 bp · +
psbI · PV929680.1 · 8,224–8,334 bp · +
trnG-UCC · PV929680.1 · 9,106–9,862 bp · +
trnR-UCU · PV929680.1 · 10,044–10,115 bp · +
trnC-GCA · PV929680.1 · 28,113–28,183 bp · +
petN · PV929680.1 · 29,021–29,110 bp · +
trnT-GGU · PV929680.1 · 31,531–31,602 bp · +
psbD · PV929680.1 · 32,849–33,910 bp · +
psbC · PV929680.1 · 33,894–35,279 bp · +
psbZ · PV929680.1 · 35,929–36,117 bp · +
trnG-GCC · PV929680.1 · 36,348–36,418 bp · +
trnS-GGA · PV929680.1 · 44,691–44,777 bp · +
trnL-UAA · PV929680.1 · 46,807–47,379 bp · +
trnF-GAA · PV929680.1 · 47,666–47,738 bp · +
trnM-CAU · PV929680.1 · 51,876–51,948 bp · +
rbcL · PV929680.1 · 54,873–56,318 bp · +
accD · PV929680.1 · 57,015–58,481 bp · +
psaI · PV929680.1 · 59,161–59,271 bp · +
pafII · PV929680.1 · 59,709–60,263 bp · +
cemA · PV929680.1 · 60,823–61,512 bp · +
petA · PV929680.1 · 61,729–62,691 bp · +
petL · PV929680.1 · 65,136–65,231 bp · +
petG · PV929680.1 · 65,406–65,519 bp · +
psaJ · PV929680.1 · 66,228–66,362 bp · +
rpl33 · PV929680.1 · 66,830–67,030 bp · +
rps18 · PV929680.1 · 67,179–67,484 bp · +
rps12 · PV929680.1 · 137,492–138,285 bp · +
psbB · PV929680.1 · 71,396–72,922 bp · +
psbT · PV929680.1 · 73,112–73,213 bp · +
psbH · PV929680.1 · 73,522–73,743 bp · +
petB · PV929680.1 · 73,868–75,252 bp · +
petD · PV929680.1 · 75,447–76,660 bp · +
ycf2 · PV929680.1 · 85,143–91,970 bp · +
ycf15 · PV929680.1 · 92,013–92,261 bp · +
trnV-GAC · PV929680.1 · 98,557–98,628 bp · +
rrn16 · PV929680.1 · 98,856–100,346 bp · +
trnI-GAU · PV929680.1 · 100,636–101,643 bp · +
trnA-UGC · PV929680.1 · 101,708–102,586 bp · +
rrn23 · PV929680.1 · 102,778–105,389 bp · +
rrn23 · PV929680.1 · 102,778–105,589 bp · +
rrn4.5 · PV929680.1 · 105,687–105,789 bp · +
rrn5 · PV929680.1 · 106,045–106,165 bp · +
trnR-ACG · PV929680.1 · 106,400–106,473 bp · +
ycf1 · PV929680.1 · 107,442–108,560 bp · +
rpl32 · PV929680.1 · 111,239–111,415 bp · +
trnL-UAG · PV929680.1 · 111,939–112,018 bp · +
ccsA · PV929680.1 · 112,103–113,074 bp · +
trnN-GUU · PV929680.1 · 127,323–127,394 bp · +
rps7 · PV929680.1 · 138,339–138,806 bp · +
ndhB · PV929680.1 · 139,081–141,292 bp · +
trnL-CAA · PV929680.1 · 141,837–141,917 bp · +
trnI-CAU · PV929680.1 · 149,385–149,458 bp · +
rpl23 · PV929680.1 · 149,624–149,905 bp · +
rpl2 · PV929680.1 · 149,924–151,415 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Phlomoides anisochila
ANNOTATED PLASTOME
PV929680.1
151,509 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37877 75754 113632 151509 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 76 75 Locate
psbA gene − 323 1381 1059 Locate
trnK-UUU gene − 1614 4202 2589 Locate
matK gene − 1918 3453 1536 Locate
rps16 gene − 5125 6264 1140 Locate
trnQ-UUG gene − 7259 7330 72 Locate
psbK gene + 7667 7852 186 Locate
psbI gene + 8224 8334 111 Locate
trnS-GCU gene − 8451 8538 88 Locate
trnG-UCC gene + 9106 9862 757 Locate
trnR-UCU gene + 10044 10115 72 Locate
atpA gene − 10212 11735 1524 Locate
atpF gene − 11824 13085 1262 Locate
atpH gene − 13451 13696 246 Locate
atpI gene − 14687 15430 744 Locate
rps2 gene − 15661 16371 711 Locate
rpoC2 gene − 16692 20765 4074 Locate
rpoC1 gene − 20932 23768 2837 Locate
rpoB gene − 23795 27007 3213 Locate
trnC-GCA gene + 28113 28183 71 Locate
petN gene + 29021 29110 90 Locate
psbM gene − 29900 30004 105 Locate
trnD-GUC gene − 30541 30614 74 Locate
trnY-GUA gene − 30728 30811 84 Locate
trnE-UUC gene − 30871 30943 73 Locate
trnT-GGU gene + 31531 31602 72 Locate
psbD gene + 32849 33910 1062 Locate
psbC gene + 33894 35279 1386 Locate
trnS-UGA gene − 35509 35601 93 Locate
psbZ gene + 35929 36117 189 Locate
trnG-GCC gene + 36348 36418 71 Locate
trnfM-CAU gene − 36569 36642 74 Locate
rps14 gene − 36792 37094 303 Locate
psaB gene − 37222 39426 2205 Locate
psaA gene − 39452 41704 2253 Locate
pafI gene − 42437 44375 1939 Locate
trnS-GGA gene + 44691 44777 87 Locate
rps4 gene − 45062 45667 606 Locate
trnT-UGU gene − 46072 46144 73 Locate
trnL-UAA gene + 46807 47379 573 Locate
trnF-GAA gene + 47666 47738 73 Locate
ndhJ gene − 48410 48886 477 Locate
ndhK gene − 48992 49732 741 Locate
ndhC gene − 49723 50085 363 Locate
trnV-UAC gene − 51040 51687 648 Locate
trnM-CAU gene + 51876 51948 73 Locate
atpE gene − 52171 52572 402 Locate
atpB gene − 52569 54065 1497 Locate
rbcL gene + 54873 56318 1446 Locate
accD gene + 57015 58481 1467 Locate
psaI gene + 59161 59271 111 Locate
pafII gene + 59709 60263 555 Locate
cemA gene + 60823 61512 690 Locate
petA gene + 61729 62691 963 Locate
psbJ gene − 63718 63840 123 Locate
psbL gene − 63978 64094 117 Locate
psbF gene − 64118 64237 120 Locate
psbE gene − 64252 64503 252 Locate
petL gene + 65136 65231 96 Locate
petG gene + 65406 65519 114 Locate
trnW-CCA gene − 65644 65717 74 Locate
trnP-UGG gene − 65880 65953 74 Locate
psaJ gene + 66228 66362 135 Locate
rpl33 gene + 66830 67030 201 Locate
rps18 gene + 67179 67484 306 Locate
rpl20 gene − 67700 68086 387 Locate
rps12 gene − 68847 68960 114 Locate
clpP1 gene − 69087 70963 1877 Locate
psbB gene + 71396 72922 1527 Locate
psbT gene + 73112 73213 102 Locate
psbN gene − 73287 73418 132 Locate
psbH gene + 73522 73743 222 Locate
petB gene + 73868 75252 1385 Locate
petD gene + 75447 76660 1214 Locate
rpoA gene − 76823 77836 1014 Locate
rps11 gene − 77908 78324 417 Locate
rpl36 gene − 78427 78540 114 Locate
infA gene − 78636 78869 234 Locate
rps8 gene − 78994 79407 414 Locate
rpl14 gene − 79575 79943 369 Locate
rpl16 gene − 80070 81376 1307 Locate
rps3 gene − 81523 82185 663 Locate
rpl22 gene − 82170 82634 465 Locate
rps19 gene − 82693 82971 279 Locate
rpl2 gene − 83024 84515 1492 Locate
rpl23 gene − 84534 84815 282 Locate
trnI-CAU gene − 84981 85054 74 Locate
ycf2 gene + 85143 91970 6828 Locate
ycf15 gene + 92013 92261 249 Locate
trnL-CAA gene − 92522 92602 81 Locate
ndhB gene − 93147 95358 2212 Locate
rps7 gene − 95633 96100 468 Locate
rps12 gene − 96154 96947 794 Locate
trnV-GAC gene + 98557 98628 72 Locate
rrn16 gene + 98856 100346 1491 Locate
trnI-GAU gene + 100636 101643 1008 Locate
trnA-UGC gene + 101708 102586 879 Locate
rrn23 rRNA + 102778 105389 2612 Locate
rrn23 gene + 102778 105589 2812 Locate
rrn4.5 gene + 105687 105789 103 Locate
rrn5 gene + 106045 106165 121 Locate
trnR-ACG gene + 106400 106473 74 Locate
trnN-GUU gene − 107045 107116 72 Locate
ycf1 gene + 107442 108560 1119 Locate
ndhF gene − 108506 110728 2223 Locate
rpl32 gene + 111239 111415 177 Locate
trnL-UAG gene + 111939 112018 80 Locate
ccsA gene + 112103 113074 972 Locate
ndhD gene − 113255 114757 1503 Locate
psaC gene − 114888 115133 246 Locate
ndhE gene − 115396 115701 306 Locate
ndhG gene − 115916 116446 531 Locate
ndhI gene − 116812 117318 507 Locate
ndhA gene − 117405 119568 2164 Locate
ndhH gene − 119570 120751 1182 Locate
rps15 gene − 120852 121124 273 Locate
ycf1 gene − 121505 126997 5493 Locate
trnN-GUU gene + 127323 127394 72 Locate
trnR-ACG gene − 127966 128039 74 Locate
rrn5 gene − 128274 128394 121 Locate
rrn4.5 gene − 128650 128752 103 Locate
rrn23 gene − 128851 131661 2811 Locate
trnA-UGC gene − 131853 132731 879 Locate
trnI-GAU gene − 132796 133803 1008 Locate
rrn16 gene − 134093 135583 1491 Locate
trnV-GAC gene − 135811 135882 72 Locate
rps12 gene + 137492 138285 794 Locate
rps7 gene + 138339 138806 468 Locate
ndhB gene + 139081 141292 2212 Locate
trnL-CAA gene + 141837 141917 81 Locate
ycf2 gene − 142469 149296 6828 Locate
trnI-CAU gene + 149385 149458 74 Locate
rpl23 gene + 149624 149905 282 Locate
rpl2 gene + 149924 151415 1492 Locate
Status Available
Accession PV929680.1
Length 151,509 bp
GC content 38.5%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 9
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources