Coordinate-aware organelle record

Phlomoides rotata chloroplast genome

Available NC_065733.1 151,733 bp 154 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

154 features

Gene	Type	Group	Strand	Start	End	Length
ycf1	gene	other	−	0	151733	151733
trnN-GUU	gene	translation-rna	+	1358	1432	74
trnN-GUU	gene	translation-rna	+	1359	1431	72
trnR-ACG	gene	translation-rna	−	2002	2077	75
trnR-ACG	gene	translation-rna	−	2003	2077	74
rrn5	gene	ribosomal-rna	−	2311	2432	121
rrn4.5	gene	ribosomal-rna	−	2687	2790	103
rrn23	gene	ribosomal-rna	−	2888	5699	2811
trnA-UGC	gene	translation-rna	−	5890	6769	879
trnI-GAU	gene	translation-rna	−	6833	7842	1009
rrn16	gene	ribosomal-rna	−	8131	9622	1491
trnV-GAC	gene	translation-rna	−	9849	9921	72
rps12	gene	ribosomal-protein	+	11537	94413	82876
rps7	gene	ribosomal-protein	+	12384	12852	468
ndhB	gene	nad-dehydrogenase	+	13126	15338	2212
trnL-CAA	gene	translation-rna	+	15881	15964	83
trnL-CAA	gene	translation-rna	+	15882	15963	81
ycf15	gene	other	−	16223	16472	249
ycf2	gene	other	−	16514	23381	6867
trnI-CAU	gene	translation-rna	+	23469	23543	74
trnM-CAU	gene	translation-rna	+	23469	23544	75
rpl23	gene	ribosomal-protein	+	23708	23990	282
rpl2	gene	ribosomal-protein	+	24008	25499	1491
trnH-GUG	gene	translation-rna	−	25593	25668	75
trnH-GUG	gene	translation-rna	−	25594	25668	74
trnH-GUG	gene	translation-rna	−	25594	25669	75
psbA	gene	photosystem-ii	−	25916	26975	1059
trnK-UUU	gene	translation-rna	−	27205	29796	2591
trnK-UUU	gene	translation-rna	−	27207	29796	2589
matK	gene	other	−	27509	29045	1536
rps16	gene	ribosomal-protein	−	30710	31854	1144
trnQ-UUG	gene	translation-rna	−	32529	32602	73
trnQ-UUG	gene	translation-rna	−	32530	32602	72
psbK	gene	photosystem-ii	+	32938	33124	186
psbI	gene	photosystem-ii	+	33506	33617	111
trnS-GCU	gene	translation-rna	−	33744	33832	88
trnS-CGA	gene	translation-rna	+	34515	35278	763
trnG-UCC	gene	translation-rna	+	34516	35277	761
trnR-UCU	gene	translation-rna	+	35453	35525	72
atpA	gene	atp-synthase	−	35621	37145	1524
atpF	gene	atp-synthase	−	37232	38443	1211
atpH	gene	atp-synthase	−	38808	39054	246
atpI	gene	atp-synthase	−	39987	40731	744
rps2	gene	ribosomal-protein	−	40961	41672	711
rpoC2	gene	rna-polymerase	−	41891	46082	4191
rpoC1	gene	rna-polymerase	−	46236	49076	2840
rpoB	gene	rna-polymerase	−	49102	52315	3213
trnC-GCA	gene	translation-rna	+	53416	53487	71
petN	gene	cytochrome	+	54310	54406	96
psbM	gene	photosystem-ii	−	55181	55286	105
trnD-GUC	gene	translation-rna	−	55814	55890	76
trnD-GUC	gene	translation-rna	−	55815	55889	74
trnY-GUA	gene	translation-rna	−	56003	56089	86
trnY-GUA	gene	translation-rna	−	56004	56088	84
trnE-UUC	gene	translation-rna	−	56147	56220	73
trnT-GGU	gene	translation-rna	+	56809	56883	74
trnT-GGU	gene	translation-rna	+	56810	56882	72
psbD	gene	photosystem-ii	+	58025	59087	1062
psbC	gene	photosystem-ii	+	59034	60456	1422
trnS-UGA	gene	translation-rna	−	60689	60782	93
psbZ	gene	photosystem-ii	+	61108	61297	189
trnG-GCC	gene	translation-rna	+	61523	61594	71
trnG-GCC	gene	translation-rna	+	61523	61595	72
trnM-CAU	gene	translation-rna	−	61741	61816	75
trnfM-CAU	gene	translation-rna	−	61742	61816	74
rps14	gene	ribosomal-protein	−	61965	62268	303
psaB	gene	photosystem-i	−	62395	64600	2205
psaA	gene	photosystem-i	−	64625	66878	2253
pafI	gene	other	−	67607	69548	1941
trnS-GGA	gene	translation-rna	+	69864	69951	87
rps4	gene	ribosomal-protein	−	70235	70841	606
trnT-UGU	gene	translation-rna	−	71228	71303	75
trnT-UGU	gene	translation-rna	−	71229	71302	73
trnL-UAA	gene	translation-rna	+	71972	72546	574
trnF-GAA	gene	translation-rna	+	72837	72910	73
trnF-GAA	gene	translation-rna	+	72837	72911	74
ndhJ	gene	nad-dehydrogenase	−	73589	74066	477
ndhK	gene	nad-dehydrogenase	−	74166	74844	678
ndhC	gene	nad-dehydrogenase	−	74896	75259	363
trnV-UAC	gene	translation-rna	−	76220	76873	653
trnM-CAU	gene	translation-rna	+	77061	77134	73
atpE	gene	atp-synthase	−	77351	77753	402
atpB	gene	atp-synthase	−	77749	79246	1497
rbcL	gene	other	+	80055	81501	1446
accD	gene	other	+	82190	83657	1467
psaI	gene	photosystem-i	+	84347	84458	111
pafII	gene	other	+	84896	85451	555
cemA	gene	other	+	86011	86701	690
petA	gene	cytochrome	+	86917	87880	963
psbJ	gene	photosystem-ii	−	88888	89011	123
psbL	gene	photosystem-ii	−	89148	89265	117
psbF	gene	photosystem-ii	−	89288	89408	120
psbE	gene	photosystem-ii	−	89422	89674	252
petL	gene	cytochrome	+	90595	90691	96
petG	gene	cytochrome	+	90865	90979	114
trnW-CCA	gene	translation-rna	−	91104	91178	74
trnP-UGG	gene	translation-rna	−	91327	91403	76
trnP-UGG	gene	translation-rna	−	91329	91403	74
psaJ	gene	photosystem-i	+	91677	91812	135
rpl33	gene	ribosomal-protein	+	92282	92483	201
rps18	gene	ribosomal-protein	+	92630	92936	306
rpl20	gene	ribosomal-protein	−	93151	93538	387
rps12	gene	ribosomal-protein	−	94299	122468	28169
clpP1	gene	other	−	94544	96417	1873
psbB	gene	photosystem-ii	+	96848	98375	1527
psbT	gene	photosystem-ii	+	98565	98667	102
pbf1	gene	other	−	98740	98872	132
psbH	gene	photosystem-ii	+	98975	99197	222
petB	gene	cytochrome	+	99321	100706	1385
petD	gene	cytochrome	+	100900	102125	1225
rpoA	gene	rna-polymerase	−	102293	103313	1020
rps11	gene	ribosomal-protein	−	103384	103801	417
rpl36	gene	ribosomal-protein	−	103903	104017	114
infA	gene	other	−	104112	104346	234
rps8	gene	ribosomal-protein	−	104469	104883	414
rpl14	gene	ribosomal-protein	−	105064	105433	369
rpl16	gene	ribosomal-protein	−	105559	106852	1293
rps3	gene	ribosomal-protein	−	106989	107652	663
rpl22	gene	ribosomal-protein	−	107636	108101	465
rps19	gene	ribosomal-protein	−	108175	108454	279
rpl2	gene	ribosomal-protein	−	108506	109997	1491
rpl23	gene	ribosomal-protein	−	110015	110297	282
trnM-CAU	gene	translation-rna	−	110461	110536	75
trnI-CAU	gene	translation-rna	−	110462	110536	74
ycf2	gene	other	+	110624	117491	6867
ycf15	gene	other	+	117533	117782	249
trnL-CAA	gene	translation-rna	−	118041	118124	83
trnL-CAA	gene	translation-rna	−	118042	118123	81
ndhB	gene	nad-dehydrogenase	−	118667	120879	2212
rps7	gene	ribosomal-protein	−	121153	121621	468
trnV-GAC	gene	translation-rna	+	124084	124156	72
rrn16	gene	ribosomal-rna	+	124383	125874	1491
trnI-GAU	gene	translation-rna	+	126163	127172	1009
trnA-UGC	gene	translation-rna	+	127236	128115	879
rrn23	gene	ribosomal-rna	+	128306	131117	2811
rrn4.5	gene	ribosomal-rna	+	131215	131318	103
rrn5	gene	ribosomal-rna	+	131573	131694	121
trnR-ACG	gene	translation-rna	+	131928	132002	74
trnR-ACG	gene	translation-rna	+	131928	132003	75
trnN-GUU	gene	translation-rna	−	132573	132647	74
trnN-GUU	gene	translation-rna	−	132574	132646	72
ycf1	gene	other	+	132971	134090	1119
ndhF	gene	nad-dehydrogenase	−	134035	136258	2223
rpl32	gene	ribosomal-protein	+	136762	136939	177
trnL-UAG	gene	translation-rna	+	137678	137758	80
ccsA	gene	other	+	137858	138821	963
ndhD	gene	nad-dehydrogenase	−	139004	140414	1410
psaC	gene	photosystem-i	−	140625	140871	246
ndhE	gene	nad-dehydrogenase	−	141135	141441	306
ndhG	gene	nad-dehydrogenase	−	141648	142179	531
ndhI	gene	nad-dehydrogenase	−	142551	143058	507
ndhA	gene	nad-dehydrogenase	−	143139	145308	2169
ndhH	gene	nad-dehydrogenase	−	145309	146491	1182
rps15	gene	ribosomal-protein	−	146591	146864	273

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_065733.1DNA · accDNC_065733DNA · atpBNC_065733DNA · matKNC_065733DNA · ndhFNC_065733DNA · psbANC_065733DNA · rbcLNC_065733DNA · rps12NC_065733DNA · ycf1NC_065733