Plectranthus barbatus chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_066019.1 · 9–83 bp · −
psbA · NC_066019.1 · 351–1,409 bp · −
trnK-UUU · NC_066019.1 · 1,641–4,221 bp · −
matK · NC_066019.1 · 1,961–3,481 bp · −
rps16 · NC_066019.1 · 4,756–5,883 bp · −
trnQ-UUG · NC_066019.1 · 6,938–7,009 bp · −
trnS-GCU · NC_066019.1 · 8,270–8,357 bp · −
atpA · NC_066019.1 · 10,277–11,800 bp · −
atpF · NC_066019.1 · 11,895–13,143 bp · −
atpH · NC_066019.1 · 13,427–13,672 bp · −
atpI · NC_066019.1 · 14,699–15,442 bp · −
rps2 · NC_066019.1 · 15,668–16,378 bp · −
rpoC2 · NC_066019.1 · 16,585–20,742 bp · −
rpoC1 · NC_066019.1 · 20,918–23,741 bp · −
rpoB · NC_066019.1 · 23,768–26,980 bp · −
psbM · NC_066019.1 · 29,523–29,627 bp · −
trnD-GUC · NC_066019.1 · 30,146–30,219 bp · −
trnY-GUA · NC_066019.1 · 30,330–30,413 bp · −
trnE-UUC · NC_066019.1 · 30,491–30,563 bp · −
trnS-UGA · NC_066019.1 · 35,196–35,288 bp · −
trnfM-CAU · NC_066019.1 · 41,000–41,073 bp · −
rps14 · NC_066019.1 · 41,218–41,520 bp · −
psaB · NC_066019.1 · 41,643–43,847 bp · −
psaA · NC_066019.1 · 43,873–46,125 bp · −
pafI · NC_066019.1 · 46,956–48,912 bp · −
rps4 · NC_066019.1 · 50,137–50,742 bp · −
trnT-UGU · NC_066019.1 · 51,123–51,195 bp · −
ndhJ · NC_066019.1 · 53,502–53,978 bp · −
ndhK · NC_066019.1 · 54,089–54,766 bp · −
ndhC · NC_066019.1 · 54,818–55,180 bp · −
trnV-UAC · NC_066019.1 · 56,120–56,764 bp · −
atpE · NC_066019.1 · 57,244–57,645 bp · −
atpB · NC_066019.1 · 57,642–59,138 bp · −
psbJ · NC_066019.1 · 68,897–69,019 bp · −
psbL · NC_066019.1 · 69,154–69,270 bp · −
psbF · NC_066019.1 · 69,294–69,413 bp · −
psbE · NC_066019.1 · 69,428–69,679 bp · −
trnW-CCA · NC_066019.1 · 71,071–71,144 bp · −
trnP-UGG · NC_066019.1 · 71,312–71,385 bp · −
rpl20 · NC_066019.1 · 73,161–73,547 bp · −
rps12 · NC_066019.1 · 74,281–74,394 bp · −
rps12 · NC_066019.1 · 101,686–102,479 bp · −
clpP1 · NC_066019.1 · 74,513–76,417 bp · −
pbf1 · NC_066019.1 · 78,756–78,887 bp · −
rpoA · NC_066019.1 · 82,288–83,295 bp · −
rps11 · NC_066019.1 · 83,367–83,783 bp · −
rpl36 · NC_066019.1 · 83,893–84,006 bp · −
infA · NC_066019.1 · 84,102–84,335 bp · −
rps8 · NC_066019.1 · 84,461–84,865 bp · −
rpl14 · NC_066019.1 · 85,037–85,405 bp · −
rpl16 · NC_066019.1 · 85,526–86,802 bp · −
rps3 · NC_066019.1 · 86,951–87,613 bp · −
rpl22 · NC_066019.1 · 87,598–88,071 bp · −
rps19 · NC_066019.1 · 88,147–88,425 bp · −
rpl2 · NC_066019.1 · 88,493–89,971 bp · −
rpl23 · NC_066019.1 · 89,990–90,271 bp · −
trnI-CAU · NC_066019.1 · 90,437–90,510 bp · −
trnL-CAA · NC_066019.1 · 98,038–98,118 bp · −
ndhB · NC_066019.1 · 98,687–100,894 bp · −
rps7 · NC_066019.1 · 101,165–101,632 bp · −
trnN-GUU · NC_066019.1 · 112,600–112,671 bp · −
ndhF · NC_066019.1 · 114,037–116,268 bp · −
ndhD · NC_066019.1 · 119,036–120,346 bp · −
psaC · NC_066019.1 · 120,656–120,901 bp · −
ndhE · NC_066019.1 · 121,152–121,457 bp · −
ndhG · NC_066019.1 · 121,665–122,195 bp · −
ndhI · NC_066019.1 · 122,564–123,070 bp · −
ndhA · NC_066019.1 · 123,146–125,261 bp · −
ndhH · NC_066019.1 · 125,263–126,444 bp · −
rps15 · NC_066019.1 · 126,559–126,831 bp · −
ycf1 · NC_066019.1 · 127,253–132,835 bp · −
trnR-ACG · NC_066019.1 · 133,825–133,898 bp · −
rrn5 · NC_066019.1 · 134,142–134,262 bp · −
rrn4.5 · NC_066019.1 · 134,518–134,620 bp · −
rrn23 · NC_066019.1 · 134,719–137,529 bp · −
trnA-UGC · NC_066019.1 · 137,683–138,560 bp · −
trnI-GAU · NC_066019.1 · 138,625–139,645 bp · −
rrn16 · NC_066019.1 · 139,943–141,427 bp · −
trnV-GAC · NC_066019.1 · 141,654–141,725 bp · −
ycf15 · NC_066019.1 · 148,071–148,319 bp · −
ycf2 · NC_066019.1 · 148,410–155,243 bp · −
psbK · NC_066019.1 · 7,408–7,593 bp · +
psbI · NC_066019.1 · 7,990–8,100 bp · +
trnG-UCC · NC_066019.1 · 9,162–9,916 bp · +
trnR-UCU · NC_066019.1 · 10,102–10,173 bp · +
trnC-GCA · NC_066019.1 · 28,187–28,257 bp · +
petN · NC_066019.1 · 28,420–28,509 bp · +
trnT-GGU · NC_066019.1 · 31,166–31,237 bp · +
psbD · NC_066019.1 · 32,531–33,592 bp · +
psbC · NC_066019.1 · 33,576–34,961 bp · +
psbZ · NC_066019.1 · 35,622–35,810 bp · +
trnG-GCC · NC_066019.1 · 40,757–40,827 bp · +
trnS-GGA · NC_066019.1 · 49,762–49,848 bp · +
trnL-UAA · NC_066019.1 · 51,889–52,450 bp · +
trnF-GAA · NC_066019.1 · 52,755–52,827 bp · +
trnM-CAU · NC_066019.1 · 56,964–57,036 bp · +
rbcL · NC_066019.1 · 59,942–61,375 bp · +
accD · NC_066019.1 · 62,067–63,548 bp · +
psaI · NC_066019.1 · 64,276–64,386 bp · +
pafII · NC_066019.1 · 64,835–65,389 bp · +
cemA · NC_066019.1 · 66,039–66,728 bp · +
petA · NC_066019.1 · 66,938–67,900 bp · +
petL · NC_066019.1 · 70,560–70,655 bp · +
petG · NC_066019.1 · 70,830–70,943 bp · +
psaJ · NC_066019.1 · 71,674–71,808 bp · +
rpl33 · NC_066019.1 · 72,263–72,463 bp · +
rps18 · NC_066019.1 · 72,622–72,927 bp · +
psbB · NC_066019.1 · 76,890–78,416 bp · +
psbT · NC_066019.1 · 78,589–78,690 bp · +
psbH · NC_066019.1 · 78,993–79,211 bp · +
petB · NC_066019.1 · 79,346–80,733 bp · +
petD · NC_066019.1 · 80,929–82,111 bp · +
ycf2 · NC_066019.1 · 90,605–97,438 bp · +
ycf15 · NC_066019.1 · 97,529–97,777 bp · +
trnV-GAC · NC_066019.1 · 104,123–104,194 bp · +
rrn16 · NC_066019.1 · 104,421–105,905 bp · +
trnI-GAU · NC_066019.1 · 106,203–107,223 bp · +
trnA-UGC · NC_066019.1 · 107,288–108,165 bp · +
rrn23 · NC_066019.1 · 108,319–111,129 bp · +
rrn4.5 · NC_066019.1 · 111,228–111,330 bp · +
rrn5 · NC_066019.1 · 111,586–111,706 bp · +
trnR-ACG · NC_066019.1 · 111,950–112,023 bp · +
ycf1 · NC_066019.1 · 113,013–114,143 bp · +
rpl32 · NC_066019.1 · 116,744–116,911 bp · +
trnL-UAG · NC_066019.1 · 117,671–117,750 bp · +
ccsA · NC_066019.1 · 117,841–118,806 bp · +
trnN-GUU · NC_066019.1 · 133,177–133,248 bp · +
rps7 · NC_066019.1 · 144,216–144,683 bp · +
ndhB · NC_066019.1 · 144,954–147,161 bp · +
trnL-CAA · NC_066019.1 · 147,730–147,810 bp · +
trnI-CAU · NC_066019.1 · 155,338–155,411 bp · +
rpl23 · NC_066019.1 · 155,577–155,858 bp · +
rpl2 · NC_066019.1 · 155,877–157,355 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Plectranthus barbatus
ANNOTATED PLASTOME
NC_066019.1
157,467 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 39367 78734 118100 157467 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 83 75 Locate
psbA gene − 351 1409 1059 Locate
trnK-UUU gene − 1641 4221 2581 Locate
matK gene − 1961 3481 1521 Locate
rps16 gene − 4756 5883 1128 Locate
trnQ-UUG gene − 6938 7009 72 Locate
psbK gene + 7408 7593 186 Locate
psbI gene + 7990 8100 111 Locate
trnS-GCU gene − 8270 8357 88 Locate
trnG-UCC gene + 9162 9916 755 Locate
trnR-UCU gene + 10102 10173 72 Locate
atpA gene − 10277 11800 1524 Locate
atpF gene − 11895 13143 1249 Locate
atpH gene − 13427 13672 246 Locate
atpI gene − 14699 15442 744 Locate
rps2 gene − 15668 16378 711 Locate
rpoC2 gene − 16585 20742 4158 Locate
rpoC1 gene − 20918 23741 2824 Locate
rpoB gene − 23768 26980 3213 Locate
trnC-GCA gene + 28187 28257 71 Locate
petN gene + 28420 28509 90 Locate
psbM gene − 29523 29627 105 Locate
trnD-GUC gene − 30146 30219 74 Locate
trnY-GUA gene − 30330 30413 84 Locate
trnE-UUC gene − 30491 30563 73 Locate
trnT-GGU gene + 31166 31237 72 Locate
psbD gene + 32531 33592 1062 Locate
psbC gene + 33576 34961 1386 Locate
trnS-UGA gene − 35196 35288 93 Locate
psbZ gene + 35622 35810 189 Locate
trnG-GCC gene + 40757 40827 71 Locate
trnfM-CAU gene − 41000 41073 74 Locate
rps14 gene − 41218 41520 303 Locate
psaB gene − 41643 43847 2205 Locate
psaA gene − 43873 46125 2253 Locate
pafI gene − 46956 48912 1957 Locate
trnS-GGA gene + 49762 49848 87 Locate
rps4 gene − 50137 50742 606 Locate
trnT-UGU gene − 51123 51195 73 Locate
trnL-UAA gene + 51889 52450 562 Locate
trnF-GAA gene + 52755 52827 73 Locate
ndhJ gene − 53502 53978 477 Locate
ndhK gene − 54089 54766 678 Locate
ndhC gene − 54818 55180 363 Locate
trnV-UAC gene − 56120 56764 645 Locate
trnM-CAU gene + 56964 57036 73 Locate
atpE gene − 57244 57645 402 Locate
atpB gene − 57642 59138 1497 Locate
rbcL gene + 59942 61375 1434 Locate
accD gene + 62067 63548 1482 Locate
psaI gene + 64276 64386 111 Locate
pafII gene + 64835 65389 555 Locate
cemA gene + 66039 66728 690 Locate
petA gene + 66938 67900 963 Locate
psbJ gene − 68897 69019 123 Locate
psbL gene − 69154 69270 117 Locate
psbF gene − 69294 69413 120 Locate
psbE gene − 69428 69679 252 Locate
petL gene + 70560 70655 96 Locate
petG gene + 70830 70943 114 Locate
trnW-CCA gene − 71071 71144 74 Locate
trnP-UGG gene − 71312 71385 74 Locate
psaJ gene + 71674 71808 135 Locate
rpl33 gene + 72263 72463 201 Locate
rps18 gene + 72622 72927 306 Locate
rpl20 gene − 73161 73547 387 Locate
rps12 gene − 74281 74394 114 Locate
clpP1 gene − 74513 76417 1905 Locate
psbB gene + 76890 78416 1527 Locate
psbT gene + 78589 78690 102 Locate
pbf1 gene − 78756 78887 132 Locate
psbH gene + 78993 79211 219 Locate
petB gene + 79346 80733 1388 Locate
petD gene + 80929 82111 1183 Locate
rpoA gene − 82288 83295 1008 Locate
rps11 gene − 83367 83783 417 Locate
rpl36 gene − 83893 84006 114 Locate
infA gene − 84102 84335 234 Locate
rps8 gene − 84461 84865 405 Locate
rpl14 gene − 85037 85405 369 Locate
rpl16 gene − 85526 86802 1277 Locate
rps3 gene − 86951 87613 663 Locate
rpl22 gene − 87598 88071 474 Locate
rps19 gene − 88147 88425 279 Locate
rpl2 gene − 88493 89971 1479 Locate
rpl23 gene − 89990 90271 282 Locate
trnI-CAU gene − 90437 90510 74 Locate
ycf2 gene + 90605 97438 6834 Locate
ycf15 gene + 97529 97777 249 Locate
trnL-CAA gene − 98038 98118 81 Locate
ndhB gene − 98687 100894 2208 Locate
rps7 gene − 101165 101632 468 Locate
rps12 gene − 101686 102479 794 Locate
trnV-GAC gene + 104123 104194 72 Locate
rrn16 gene + 104421 105905 1485 Locate
trnI-GAU gene + 106203 107223 1021 Locate
trnA-UGC gene + 107288 108165 878 Locate
rrn23 gene + 108319 111129 2811 Locate
rrn4.5 gene + 111228 111330 103 Locate
rrn5 gene + 111586 111706 121 Locate
trnR-ACG gene + 111950 112023 74 Locate
trnN-GUU gene − 112600 112671 72 Locate
ycf1 gene + 113013 114143 1131 Locate
ndhF gene − 114037 116268 2232 Locate
rpl32 gene + 116744 116911 168 Locate
trnL-UAG gene + 117671 117750 80 Locate
ccsA gene + 117841 118806 966 Locate
ndhD gene − 119036 120346 1311 Locate
psaC gene − 120656 120901 246 Locate
ndhE gene − 121152 121457 306 Locate
ndhG gene − 121665 122195 531 Locate
ndhI gene − 122564 123070 507 Locate
ndhA gene − 123146 125261 2116 Locate
ndhH gene − 125263 126444 1182 Locate
rps15 gene − 126559 126831 273 Locate
ycf1 gene − 127253 132835 5583 Locate
trnN-GUU gene + 133177 133248 72 Locate
trnR-ACG gene − 133825 133898 74 Locate
rrn5 gene − 134142 134262 121 Locate
rrn4.5 gene − 134518 134620 103 Locate
rrn23 gene − 134719 137529 2811 Locate
trnA-UGC gene − 137683 138560 878 Locate
trnI-GAU gene − 138625 139645 1021 Locate
rrn16 gene − 139943 141427 1485 Locate
trnV-GAC gene − 141654 141725 72 Locate
rps7 gene + 144216 144683 468 Locate
ndhB gene + 144954 147161 2208 Locate
trnL-CAA gene + 147730 147810 81 Locate
ycf15 gene − 148071 148319 249 Locate
ycf2 gene − 148410 155243 6834 Locate
trnI-CAU gene + 155338 155411 74 Locate
rpl23 gene + 155577 155858 282 Locate
rpl2 gene + 155877 157355 1479 Locate
Status Available
Accession NC_066019.1
Length 157,467 bp
GC content 37.8%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources