Coordinate-aware organelle record

Pogostemon cablin chloroplast genome

Available NC_042796.1 152,461 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	286	1345	1059
trnK-UUU	gene	translation-rna	−	1576	4180	2604
matK	gene	other	−	1893	3429	1536
rps16	gene	ribosomal-protein	−	5069	6216	1147
trnQ-UUG	gene	translation-rna	−	7363	7435	72
psbK	gene	photosystem-ii	+	7761	7947	186
psbI	gene	photosystem-ii	+	8305	8416	111
trnS-GCU	gene	translation-rna	−	8540	8628	88
trnS-CGA	gene	translation-rna	+	9280	10038	758
trnR-UCU	gene	translation-rna	+	10233	10305	72
atpA	gene	atp-synthase	−	10415	11939	1524
atpF	gene	atp-synthase	−	12040	13319	1279
atpH	gene	atp-synthase	−	13692	13938	246
atpI	gene	atp-synthase	−	14966	15710	744
rps2	gene	ribosomal-protein	−	15923	16634	711
rpoC2	gene	rna-polymerase	−	16858	21013	4155
rpoC1	gene	rna-polymerase	−	21167	23994	2827
rpoB	gene	rna-polymerase	−	24020	27233	3213
trnC-GCA	gene	translation-rna	+	28196	28267	71
petN	gene	cytochrome	+	28479	28569	90
psbM	gene	photosystem-ii	−	29532	29637	105
trnD-GUC	gene	translation-rna	−	30140	30217	77
trnY-GUA	gene	translation-rna	−	30323	30410	87
trnE-UUC	gene	translation-rna	−	30468	30541	73
trnT-GGU	gene	translation-rna	+	31091	31165	74
psbD	gene	photosystem-ii	+	32293	33355	1062
psbC	gene	photosystem-ii	+	33302	34724	1422
trnS-UGA	gene	translation-rna	−	34959	35052	93
psbZ	gene	photosystem-ii	+	35344	35533	189
trnG-GCC	gene	translation-rna	+	35802	35874	72
trnfM-CAU	gene	translation-rna	−	36034	36109	75
rps14	gene	ribosomal-protein	−	36258	36561	303
psaB	gene	photosystem-i	−	36688	38893	2205
psaA	gene	photosystem-i	−	38918	41171	2253
ycf3	gene	other	−	41912	43847	1935
trnS-GGA	gene	translation-rna	+	44761	44848	87
rps4	gene	ribosomal-protein	−	45113	45719	606
trnT-UGU	gene	translation-rna	−	46085	46160	75
trnL-UAA	gene	translation-rna	+	46841	47413	572
trnF-GAA	gene	translation-rna	+	47730	47804	74
ndhJ	gene	nad-dehydrogenase	−	48677	49154	477
ndhK	gene	nad-dehydrogenase	−	49259	49937	678
ndhC	gene	nad-dehydrogenase	−	49991	50354	363
trnC-ACA	gene	translation-rna	−	51145	51806	661
trnM-CAU	gene	translation-rna	+	51986	52059	73
atpE	gene	atp-synthase	−	52282	52684	402
atpB	gene	atp-synthase	−	52680	54177	1497
rbcL	gene	other	+	54966	56427	1461
accD	gene	other	+	57184	58687	1503
psaI	gene	photosystem-i	+	59378	59489	111
ycf4	gene	other	+	59922	60477	555
cemA	gene	other	+	61041	61731	690
petA	gene	cytochrome	+	61942	62905	963
psbJ	gene	photosystem-ii	−	63845	63968	123
psbL	gene	photosystem-ii	−	64110	64227	117
psbF	gene	photosystem-ii	−	64250	64370	120
psbE	gene	photosystem-ii	−	64384	64636	252
petL	gene	cytochrome	+	65564	65660	96
petG	gene	cytochrome	+	65835	65949	114
trnW-CCA	gene	translation-rna	−	66070	66144	74
trnP-UGG	gene	translation-rna	−	66315	66391	76
psaJ	gene	photosystem-i	+	66658	66793	135
rpl33	gene	ribosomal-protein	+	67264	67465	201
rps18	gene	ribosomal-protein	+	67638	67944	306
rpl20	gene	ribosomal-protein	−	68158	68545	387
rps12	gene	ribosomal-protein	−	69302	97610	28308
rps12	gene	ribosomal-protein	+	69302	139198	69896
clpP	gene	other	−	69545	71503	1958
psbB	gene	photosystem-ii	+	71951	73478	1527
psbT	gene	photosystem-ii	+	73658	73766	108
psbN	gene	photosystem-ii	−	73832	73964	132
psbH	gene	photosystem-ii	+	74067	74289	222
petB	gene	cytochrome	+	74422	75794	1372
petD	gene	cytochrome	+	75980	77207	1227
rpoA	gene	rna-polymerase	−	77377	78400	1023
rps11	gene	ribosomal-protein	−	78471	78888	417
rpl36	gene	ribosomal-protein	−	78990	79104	114
infA	gene	other	−	79199	79433	234
rps8	gene	ribosomal-protein	−	79550	79964	414
rpl14	gene	ribosomal-protein	−	80142	80511	369
rpl16	gene	ribosomal-protein	−	80645	81996	1351
rps3	gene	ribosomal-protein	−	82139	82802	663
rpl22	gene	ribosomal-protein	−	82786	83257	471
rps19	gene	ribosomal-protein	−	83316	83595	279
rpl2	gene	ribosomal-protein	−	83650	85142	1492
rpl23	gene	ribosomal-protein	−	85160	85442	282
trnM-CAU	gene	translation-rna	−	85606	85681	75
ycf2	gene	other	+	85769	92624	6855
ycf15	gene	other	+	92666	92915	249
trnL-CAA	gene	translation-rna	−	93174	93257	83
ndhB	gene	nad-dehydrogenase	−	93809	96021	2212
rps7	gene	ribosomal-protein	−	96295	96763	468
trnV-GAC	gene	translation-rna	+	99226	99298	72
rrn16	gene	ribosomal-rna	+	99524	101015	1491
trnI	gene	translation-rna	+	101305	102312	1007
trnA-UGC	gene	translation-rna	+	102380	103265	885
rrn23	gene	ribosomal-rna	+	103449	106266	2817
rrn4.5	gene	ribosomal-rna	+	106364	106467	103
rrn5	gene	ribosomal-rna	+	106718	106839	121
trnR-ACG	gene	translation-rna	+	107085	107160	75
trnN-GUU	gene	translation-rna	−	107719	107793	74
ndhF	gene	nad-dehydrogenase	−	109177	111412	2235
rpl32	gene	ribosomal-protein	+	111909	112089	180
trnL-UAG	gene	translation-rna	+	112825	112905	80
ccsA	gene	other	+	112988	113960	972
ndhD	gene	nad-dehydrogenase	−	114153	115674	1521
psaC	gene	photosystem-i	−	115766	116012	246
ndhE	gene	nad-dehydrogenase	−	116264	116570	306
ndhG	gene	nad-dehydrogenase	−	116786	117317	531
ndhI	gene	nad-dehydrogenase	−	117622	118129	507
ndhA	gene	nad-dehydrogenase	−	118238	120388	2150
ndhH	gene	nad-dehydrogenase	−	120389	121571	1182
rps15	gene	ribosomal-protein	−	121671	121944	273
ycf1	gene	other	−	122344	127888	5544
trnN-GUU	gene	translation-rna	+	128221	128295	74
trnR-ACG	gene	translation-rna	−	128854	128929	75
rrn5	gene	ribosomal-rna	−	129175	129296	121
rrn4.5	gene	ribosomal-rna	−	129547	129650	103
rrn23	gene	ribosomal-rna	−	129748	132565	2817
trnA-UGC	gene	translation-rna	−	132749	133634	885
trnI	gene	translation-rna	−	133702	134709	1007
rrn16	gene	ribosomal-rna	−	134999	136490	1491
trnV-GAC	gene	translation-rna	−	136716	136788	72
rps7	gene	ribosomal-protein	+	139251	139719	468
ndhB	gene	nad-dehydrogenase	+	139993	142205	2212
trnL-CAA	gene	translation-rna	+	142757	142840	83
ycf15	gene	other	−	143099	143348	249
ycf2	gene	other	−	143390	150245	6855
trnM-CAU	gene	translation-rna	+	150333	150408	75
rpl23	gene	ribosomal-protein	+	150572	150854	282
rpl2	gene	ribosomal-protein	+	150872	152364	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_042796.1DNA · accDNC_042796DNA · atpBNC_042796DNA · matKNC_042796DNA · ndhFNC_042796DNA · psbANC_042796DNA · rbcLNC_042796DNA · rps12NC_042796DNA · ycf1NC_042796