Coordinate-aware organelle record

Pogostemon plectranthoides chloroplast genome

Available NC_065983.1 152,430 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	274	1333	1059
trnK-UUU	gene	translation-rna	−	1564	4150	2586
matK	gene	other	−	1863	3399	1536
rps16	gene	ribosomal-protein	−	5039	6188	1149
trnQ-UUG	gene	translation-rna	−	7362	7434	72
psbK	gene	photosystem-ii	+	7760	7946	186
psbI	gene	photosystem-ii	+	8308	8419	111
trnS-GCU	gene	translation-rna	−	8532	8620	88
trnS-CGA	gene	translation-rna	+	9307	10070	763
trnR-UCU	gene	translation-rna	+	10263	10335	72
atpA	gene	atp-synthase	−	10445	11969	1524
atpF	gene	atp-synthase	−	12066	13334	1268
atpH	gene	atp-synthase	−	13687	13933	246
atpI	gene	atp-synthase	−	14951	15695	744
rps2	gene	ribosomal-protein	−	15908	16619	711
rpoC2	gene	rna-polymerase	−	16841	20996	4155
rpoC1	gene	rna-polymerase	−	21150	23992	2842
rpoB	gene	rna-polymerase	−	24018	27231	3213
trnC-GCA	gene	translation-rna	+	28226	28297	71
petN	gene	cytochrome	+	28509	28599	90
psbM	gene	photosystem-ii	−	29554	29659	105
trnD-GUC	gene	translation-rna	−	30166	30243	77
trnY-GUA	gene	translation-rna	−	30349	30436	87
trnE-UUC	gene	translation-rna	−	30494	30567	73
trnT-GGU	gene	translation-rna	+	31117	31191	74
psbD	gene	photosystem-ii	+	32313	33375	1062
psbC	gene	photosystem-ii	+	33322	34744	1422
trnS-UGA	gene	translation-rna	−	34979	35072	93
psbZ	gene	photosystem-ii	+	35364	35553	189
trnG-GCC	gene	translation-rna	+	35819	35891	72
trnfM-CAU	gene	translation-rna	−	36045	36120	75
rps14	gene	ribosomal-protein	−	36269	36572	303
psaB	gene	photosystem-i	−	36699	38904	2205
psaA	gene	photosystem-i	−	38929	41182	2253
ycf3	gene	other	−	41929	43866	1937
trnS-GGA	gene	translation-rna	+	44744	44831	87
rps4	gene	ribosomal-protein	−	45096	45702	606
trnT-UGU	gene	translation-rna	−	46075	46150	75
trnL-UAA	gene	translation-rna	+	46831	47403	572
trnF-GAA	gene	translation-rna	+	47719	47793	74
ndhJ	gene	nad-dehydrogenase	−	48651	49128	477
ndhK	gene	nad-dehydrogenase	−	49233	49911	678
ndhC	gene	nad-dehydrogenase	−	49965	50328	363
trnV	gene	translation-rna	−	51117	51778	661
trnM-CAU	gene	translation-rna	+	51958	52031	73
atpE	gene	atp-synthase	−	52254	52656	402
atpB	gene	atp-synthase	−	52652	54149	1497
rbcL	gene	other	+	54948	56409	1461
accD	gene	other	+	57167	58670	1503
psaI	gene	photosystem-i	+	59363	59474	111
ycf4	gene	other	+	59907	60462	555
cemA	gene	other	+	61026	61716	690
petA	gene	cytochrome	+	61927	62890	963
psbJ	gene	photosystem-ii	−	63834	63957	123
psbL	gene	photosystem-ii	−	64099	64216	117
psbF	gene	photosystem-ii	−	64239	64359	120
psbE	gene	photosystem-ii	−	64373	64625	252
petL	gene	cytochrome	+	65553	65649	96
petG	gene	cytochrome	+	65824	65938	114
trnW-CCA	gene	translation-rna	−	66027	66101	74
trnP-UGG	gene	translation-rna	−	66272	66348	76
psaJ	gene	photosystem-i	+	66633	66768	135
rpl33	gene	ribosomal-protein	+	67239	67440	201
rps18	gene	ribosomal-protein	+	67615	67921	306
rpl20	gene	ribosomal-protein	−	68137	68524	387
rps12	gene	ribosomal-protein	−	69282	97577	28295
rps12	gene	ribosomal-protein	+	69282	139161	69879
clpP	gene	other	−	69527	71481	1954
psbB	gene	photosystem-ii	+	71929	73456	1527
psbT	gene	photosystem-ii	+	73636	73744	108
psbN	gene	photosystem-ii	−	73810	73942	132
psbH	gene	photosystem-ii	+	74045	74267	222
petB	gene	cytochrome	+	74400	75782	1382
petD	gene	cytochrome	+	75968	77195	1227
rpoA	gene	rna-polymerase	−	77365	78388	1023
rps11	gene	ribosomal-protein	−	78459	78876	417
rpl36	gene	ribosomal-protein	−	78978	79092	114
infA	gene	other	−	79187	79421	234
rps8	gene	ribosomal-protein	−	79539	79953	414
rpl14	gene	ribosomal-protein	−	80131	80500	369
rpl16	gene	ribosomal-protein	−	80629	81956	1327
rps3	gene	ribosomal-protein	−	82100	82763	663
rpl22	gene	ribosomal-protein	−	82747	83218	471
rps19	gene	ribosomal-protein	−	83277	83556	279
rpl2	gene	ribosomal-protein	−	83610	85102	1492
rpl23	gene	ribosomal-protein	−	85120	85402	282
trnM-CAU	gene	translation-rna	−	85566	85641	75
ycf2	gene	other	+	85729	92584	6855
ycf15	gene	other	+	92626	92875	249
trnL-CAA	gene	translation-rna	−	93134	93217	83
ndhB	gene	nad-dehydrogenase	−	93769	95988	2219
rps7	gene	ribosomal-protein	−	96262	96730	468
trnV-GAC	gene	translation-rna	+	99193	99265	72
rrn16	gene	ribosomal-rna	+	99491	100982	1491
trnI	gene	translation-rna	+	101272	102279	1007
trnA-UGC	gene	translation-rna	+	102347	103232	885
rrn23	gene	ribosomal-rna	+	103416	106233	2817
rrn4.5	gene	ribosomal-rna	+	106331	106434	103
rrn5	gene	ribosomal-rna	+	106685	106806	121
trnR-ACG	gene	translation-rna	+	107052	107127	75
trnN-GUU	gene	translation-rna	−	107686	107760	74
ndhF	gene	nad-dehydrogenase	−	109157	111374	2217
rpl32	gene	ribosomal-protein	+	111875	112055	180
trnL-UAG	gene	translation-rna	+	112784	112864	80
ccsA	gene	other	+	112947	113919	972
ndhD	gene	nad-dehydrogenase	−	114130	115651	1521
psaC	gene	photosystem-i	−	115750	115996	246
ndhE	gene	nad-dehydrogenase	−	116248	116554	306
ndhG	gene	nad-dehydrogenase	−	116770	117301	531
ndhI	gene	nad-dehydrogenase	−	117605	118112	507
ndhA	gene	nad-dehydrogenase	−	118221	120371	2150
ndhH	gene	nad-dehydrogenase	−	120372	121554	1182
rps15	gene	ribosomal-protein	−	121654	121927	273
ycf1	gene	other	−	122310	127851	5541
trnN-GUU	gene	translation-rna	+	128184	128258	74
trnR-ACG	gene	translation-rna	−	128817	128892	75
rrn5	gene	ribosomal-rna	−	129138	129259	121
rrn4.5	gene	ribosomal-rna	−	129510	129613	103
rrn23	gene	ribosomal-rna	−	129711	132528	2817
trnA-UGC	gene	translation-rna	−	132712	133597	885
trnI	gene	translation-rna	−	133665	134672	1007
rrn16	gene	ribosomal-rna	−	134962	136453	1491
trnV-GAC	gene	translation-rna	−	136679	136751	72
rps7	gene	ribosomal-protein	+	139214	139682	468
ndhB	gene	nad-dehydrogenase	+	139956	142175	2219
trnL-CAA	gene	translation-rna	+	142727	142810	83
ycf15	gene	other	−	143069	143318	249
ycf2	gene	other	−	143360	150215	6855
trnM-CAU	gene	translation-rna	+	150303	150378	75
rpl23	gene	ribosomal-protein	+	150542	150824	282
rpl2	gene	ribosomal-protein	+	150842	152334	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_065983.1DNA · accDNC_065983DNA · atpBNC_065983DNA · matKNC_065983DNA · ndhFNC_065983DNA · psbANC_065983DNA · rbcLNC_065983DNA · rps12NC_065983DNA · ycf1NC_065983