Coordinate-aware organelle record

Pogostemon septentrionalis chloroplast genome

Available NC_065984.1 152,514 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	76	75
psbA	gene	photosystem-ii	−	275	1334	1059
trnK-UUU	gene	translation-rna	−	1583	4177	2594
matK	gene	other	−	1889	3425	1536
rps16	gene	ribosomal-protein	−	5069	6216	1147
trnQ-UUG	gene	translation-rna	−	7400	7472	72
psbK	gene	photosystem-ii	+	7798	7984	186
psbI	gene	photosystem-ii	+	8343	8454	111
trnS-GCU	gene	translation-rna	−	8577	8665	88
trnS-CGA	gene	translation-rna	+	9333	10094	761
trnR-UCU	gene	translation-rna	+	10284	10356	72
atpA	gene	atp-synthase	−	10468	11992	1524
atpF	gene	atp-synthase	−	12090	13359	1269
atpH	gene	atp-synthase	−	13718	13964	246
atpI	gene	atp-synthase	−	14977	15721	744
rps2	gene	ribosomal-protein	−	15934	16645	711
rpoC2	gene	rna-polymerase	−	16870	21025	4155
rpoC1	gene	rna-polymerase	−	21179	24010	2831
rpoB	gene	rna-polymerase	−	24036	27249	3213
trnC-GCA	gene	translation-rna	+	28238	28309	71
petN	gene	cytochrome	+	28521	28611	90
psbM	gene	photosystem-ii	−	29593	29698	105
trnD-GUC	gene	translation-rna	−	30200	30277	77
trnY-GUA	gene	translation-rna	−	30382	30469	87
trnE-UUC	gene	translation-rna	−	30527	30600	73
trnT-GGU	gene	translation-rna	+	31144	31218	74
psbD	gene	photosystem-ii	+	32341	33403	1062
psbC	gene	photosystem-ii	+	33350	34772	1422
trnS-UGA	gene	translation-rna	−	35007	35100	93
psbZ	gene	photosystem-ii	+	35392	35581	189
trnG-GCC	gene	translation-rna	+	35849	35921	72
trnfM-CAU	gene	translation-rna	−	36075	36150	75
rps14	gene	ribosomal-protein	−	36299	36602	303
psaB	gene	photosystem-i	−	36729	38934	2205
psaA	gene	photosystem-i	−	38959	41212	2253
ycf3	gene	other	−	41944	43874	1930
trnS-GGA	gene	translation-rna	+	44782	44869	87
rps4	gene	ribosomal-protein	−	45133	45739	606
trnT-UGU	gene	translation-rna	−	46110	46185	75
trnL-UAA	gene	translation-rna	+	46866	47438	572
trnF-GAA	gene	translation-rna	+	47755	47829	74
ndhJ	gene	nad-dehydrogenase	−	48699	49176	477
ndhK	gene	nad-dehydrogenase	−	49281	49959	678
ndhC	gene	nad-dehydrogenase	−	50013	50376	363
trnV	gene	translation-rna	−	51163	51824	661
trnM-CAU	gene	translation-rna	+	52004	52077	73
atpE	gene	atp-synthase	−	52299	52701	402
atpB	gene	atp-synthase	−	52697	54194	1497
rbcL	gene	other	+	54983	56444	1461
accD	gene	other	+	57202	58720	1518
psaI	gene	photosystem-i	+	59405	59516	111
ycf4	gene	other	+	59952	60507	555
cemA	gene	other	+	61071	61761	690
petA	gene	cytochrome	+	61972	62935	963
psbJ	gene	photosystem-ii	−	63901	64024	123
psbL	gene	photosystem-ii	−	64166	64283	117
psbF	gene	photosystem-ii	−	64306	64426	120
psbE	gene	photosystem-ii	−	64440	64692	252
petL	gene	cytochrome	+	65621	65717	96
petG	gene	cytochrome	+	65892	66006	114
trnW-CCA	gene	translation-rna	−	66127	66201	74
trnP-UGG	gene	translation-rna	−	66372	66448	76
psaJ	gene	photosystem-i	+	66715	66850	135
rpl33	gene	ribosomal-protein	+	67321	67522	201
rps18	gene	ribosomal-protein	+	67695	68001	306
rpl20	gene	ribosomal-protein	−	68217	68604	387
rps12	gene	ribosomal-protein	−	69362	97672	28310
rps12	gene	ribosomal-protein	+	69362	139250	69888
clpP	gene	other	−	69605	71573	1968
psbB	gene	photosystem-ii	+	72021	73548	1527
psbT	gene	photosystem-ii	+	73728	73836	108
psbN	gene	photosystem-ii	−	73902	74034	132
psbH	gene	photosystem-ii	+	74137	74359	222
petB	gene	cytochrome	+	74501	75883	1382
petD	gene	cytochrome	+	76069	77296	1227
rpoA	gene	rna-polymerase	−	77466	78489	1023
rps11	gene	ribosomal-protein	−	78560	78977	417
rpl36	gene	ribosomal-protein	−	79079	79193	114
infA	gene	other	−	79288	79522	234
rps8	gene	ribosomal-protein	−	79639	80053	414
rpl14	gene	ribosomal-protein	−	80231	80600	369
rpl16	gene	ribosomal-protein	−	80734	82056	1322
rps3	gene	ribosomal-protein	−	82200	82863	663
rpl22	gene	ribosomal-protein	−	82847	83318	471
rps19	gene	ribosomal-protein	−	83377	83656	279
rpl2	gene	ribosomal-protein	−	83712	85204	1492
rpl23	gene	ribosomal-protein	−	85222	85504	282
trnM-CAU	gene	translation-rna	−	85668	85743	75
ycf2	gene	other	+	85831	92686	6855
ycf15	gene	other	+	92728	92977	249
trnL-CAA	gene	translation-rna	−	93236	93319	83
ndhB	gene	nad-dehydrogenase	−	93871	96083	2212
rps7	gene	ribosomal-protein	−	96357	96825	468
trnV-GAC	gene	translation-rna	+	99288	99360	72
rrn16	gene	ribosomal-rna	+	99586	101077	1491
trnI	gene	translation-rna	+	101367	102378	1011
trnA-UGC	gene	translation-rna	+	102446	103331	885
rrn23	gene	ribosomal-rna	+	103515	106332	2817
rrn4.5	gene	ribosomal-rna	+	106430	106533	103
rrn5	gene	ribosomal-rna	+	106784	106905	121
trnR-ACG	gene	translation-rna	+	107151	107226	75
trnN-GUU	gene	translation-rna	−	107785	107859	74
ndhF	gene	nad-dehydrogenase	−	109256	111473	2217
rpl32	gene	ribosomal-protein	+	111974	112154	180
trnL-UAG	gene	translation-rna	+	112880	112960	80
ccsA	gene	other	+	113043	114015	972
ndhD	gene	nad-dehydrogenase	−	114224	115745	1521
psaC	gene	photosystem-i	−	115840	116086	246
ndhE	gene	nad-dehydrogenase	−	116338	116644	306
ndhG	gene	nad-dehydrogenase	−	116849	117380	531
ndhI	gene	nad-dehydrogenase	−	117684	118191	507
ndhA	gene	nad-dehydrogenase	−	118300	120450	2150
ndhH	gene	nad-dehydrogenase	−	120451	121633	1182
rps15	gene	ribosomal-protein	−	121733	122006	273
ycf1	gene	other	−	122389	127936	5547
trnN-GUU	gene	translation-rna	+	128269	128343	74
trnR-ACG	gene	translation-rna	−	128902	128977	75
rrn5	gene	ribosomal-rna	−	129223	129344	121
rrn4.5	gene	ribosomal-rna	−	129595	129698	103
rrn23	gene	ribosomal-rna	−	129796	132613	2817
trnA-UGC	gene	translation-rna	−	132797	133682	885
trnI	gene	translation-rna	−	133750	134761	1011
rrn16	gene	ribosomal-rna	−	135051	136542	1491
trnV-GAC	gene	translation-rna	−	136768	136840	72
rps7	gene	ribosomal-protein	+	139303	139771	468
ndhB	gene	nad-dehydrogenase	+	140045	142257	2212
trnL-CAA	gene	translation-rna	+	142809	142892	83
ycf15	gene	other	−	143151	143400	249
ycf2	gene	other	−	143442	150297	6855
trnM-CAU	gene	translation-rna	+	150385	150460	75
rpl23	gene	ribosomal-protein	+	150624	150906	282
rpl2	gene	ribosomal-protein	+	150924	152416	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_065984.1DNA · accDNC_065984DNA · atpBNC_065984DNA · matKNC_065984DNA · ndhFNC_065984DNA · psbANC_065984DNA · rbcLNC_065984DNA · rps12NC_065984DNA · ycf1NC_065984