Prostanthera althoferi subsp. althoferi chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · OR699050.1 · 3–77 bp · −
psbA · OR699050.1 · 391–1,449 bp · −
trnK-UUU · OR699050.1 · 1,684–4,247 bp · −
matK · OR699050.1 · 1,972–3,507 bp · −
rps16 · OR699050.1 · 5,158–6,284 bp · −
trnQ-UUG · OR699050.1 · 7,322–7,393 bp · −
trnS-GCU · OR699050.1 · 8,538–8,625 bp · −
atpA · OR699050.1 · 10,477–12,000 bp · −
atpF · OR699050.1 · 12,092–13,341 bp · −
atpH · OR699050.1 · 13,712–13,957 bp · −
atpI · OR699050.1 · 14,912–15,655 bp · −
rps2 · OR699050.1 · 15,879–16,589 bp · −
rpoC · OR699050.1 · 16,809–20,978 bp · −
rpoC1 · OR699050.1 · 21,133–23,974 bp · −
rpoB · OR699050.1 · 24,001–27,189 bp · −
psbM · OR699050.1 · 30,394–30,498 bp · −
trnD-GUC · OR699050.1 · 31,019–31,092 bp · −
trnY-GUA · OR699050.1 · 31,201–31,284 bp · −
trnE-UUC · OR699050.1 · 31,344–31,416 bp · −
trnS-UGA · OR699050.1 · 36,061–36,153 bp · −
trnfM-CAU · OR699050.1 · 37,198–37,271 bp · −
rps14 · OR699050.1 · 37,427–37,729 bp · −
psaB · OR699050.1 · 37,856–40,060 bp · −
psaA · OR699050.1 · 40,086–42,338 bp · −
ycf3 · OR699050.1 · 43,117–45,077 bp · −
rps4 · OR699050.1 · 46,274–46,879 bp · −
trnT-UGU · OR699050.1 · 47,282–47,354 bp · −
ndhJ · OR699050.1 · 49,696–50,172 bp · −
ndhK · OR699050.1 · 50,273–50,950 bp · −
ndhC · OR699050.1 · 51,004–51,366 bp · −
trnV-UAC · OR699050.1 · 52,416–53,067 bp · −
atpE · OR699050.1 · 53,551–53,952 bp · −
atpB · OR699050.1 · 53,949–55,454 bp · −
psbJ · OR699050.1 · 65,156–65,278 bp · −
psbL · OR699050.1 · 65,414–65,530 bp · −
psbF · OR699050.1 · 65,554–65,673 bp · −
psbE · OR699050.1 · 65,688–65,939 bp · −
trnW-CCA · OR699050.1 · 67,384–67,457 bp · −
trnP-UGG · OR699050.1 · 67,620–67,693 bp · −
rpl20 · OR699050.1 · 69,559–69,945 bp · −
rps12 · OR699050.1 · 70,785–70,898 bp · −
rps12 · OR699050.1 · 97,885–98,678 bp · −
clpP · OR699050.1 · 71,029–72,954 bp · −
psbN · OR699050.1 · 75,326–75,457 bp · −
rpoA · OR699050.1 · 78,828–79,838 bp · −
rps11 · OR699050.1 · 79,916–80,332 bp · −
rpl36 · OR699050.1 · 80,435–80,548 bp · −
infA · OR699050.1 · 80,644–80,877 bp · −
rps8 · OR699050.1 · 81,002–81,406 bp · −
rpl14 · OR699050.1 · 81,590–81,958 bp · −
rpl16 · OR699050.1 · 82,085–83,386 bp · −
rps3 · OR699050.1 · 83,526–84,185 bp · −
rpl22 · OR699050.1 · 84,192–84,635 bp · −
rps19 · OR699050.1 · 84,708–84,986 bp · −
rpl2 · OR699050.1 · 85,042–86,532 bp · −
rpl23 · OR699050.1 · 86,551–86,832 bp · −
trnI-CAU · OR699050.1 · 87,027–87,100 bp · −
trnL-CAA · OR699050.1 · 94,250–94,330 bp · −
ndhB · OR699050.1 · 96,313–97,089 bp · −
ndhB · OR699050.1 · 94,878–95,633 bp · −
ndhB · OR699050.1 · 94,878–97,090 bp · −
rps7 · OR699050.1 · 97,364–97,831 bp · −
trnN-GUU · OR699050.1 · 108,809–108,880 bp · −
ndhF · OR699050.1 · 110,302–112,545 bp · −
ndhD · OR699050.1 · 115,138–116,649 bp · −
psaC · OR699050.1 · 116,750–116,995 bp · −
ndhE · OR699050.1 · 117,244–117,549 bp · −
ndhG · OR699050.1 · 117,763–118,293 bp · −
ndhI · OR699050.1 · 118,638–119,144 bp · −
ndhA · OR699050.1 · 119,219–121,289 bp · −
ndhH · OR699050.1 · 121,291–122,472 bp · −
rps15 · OR699050.1 · 122,569–122,832 bp · −
ycf1 · OR699050.1 · 123,242–128,809 bp · −
trnR-ACG · OR699050.1 · 129,662–129,735 bp · −
rrn5 · OR699050.1 · 129,979–130,099 bp · −
rrn4.5 · OR699050.1 · 130,355–130,457 bp · −
rrn23 · OR699050.1 · 130,556–133,367 bp · −
trnA-UGC · OR699050.1 · 133,542–134,413 bp · −
trnI-GAU · OR699050.1 · 134,478–135,496 bp · −
rrn16 · OR699050.1 · 135,796–137,286 bp · −
trnV-GAC · OR699050.1 · 137,514–137,585 bp · −
ycf15 · OR699050.1 · 143,912–144,064 bp · −
ycf15 · OR699050.1 · 143,912–144,168 bp · −
ycf2 · OR699050.1 · 144,259–150,711 bp · −
psbK · OR699050.1 · 7,710–7,913 bp · +
psbI · OR699050.1 · 8,309–8,419 bp · +
trnG-UCC · OR699050.1 · 9,364–10,134 bp · +
trnR-UCU · OR699050.1 · 10,309–10,380 bp · +
trnC-GCA · OR699050.1 · 28,400–28,470 bp · +
petN · OR699050.1 · 29,298–29,387 bp · +
trnT-GGU · OR699050.1 · 31,988–32,059 bp · +
psbD · OR699050.1 · 33,391–34,452 bp · +
psbC · OR699050.1 · 34,400–35,821 bp · +
psbZ · OR699050.1 · 36,473–36,661 bp · +
trnG-GCC · OR699050.1 · 36,953–37,023 bp · +
trnS-GGA · OR699050.1 · 45,913–45,999 bp · +
trnL-UAA · OR699050.1 · 48,054–48,638 bp · +
trnF-GAA · OR699050.1 · 48,973–49,045 bp · +
trnM-CAU · OR699050.1 · 53,246–53,318 bp · +
rbcL · OR699050.1 · 56,241–57,680 bp · +
accD · OR699050.1 · 58,359–59,867 bp · +
psaI · OR699050.1 · 60,559–60,669 bp · +
ycf4 · OR699050.1 · 61,109–61,663 bp · +
cemA · OR699050.1 · 62,297–62,986 bp · +
petA · OR699050.1 · 63,180–64,142 bp · +
petL · OR699050.1 · 66,873–66,968 bp · +
petG · OR699050.1 · 67,149–67,262 bp · +
psaJ · OR699050.1 · 68,090–68,224 bp · +
rpl33 · OR699050.1 · 68,702–68,902 bp · +
rps18 · OR699050.1 · 69,065–69,370 bp · +
psbB · OR699050.1 · 73,426–74,952 bp · +
psbT · OR699050.1 · 75,158–75,265 bp · +
psbH · OR699050.1 · 75,545–75,784 bp · +
petB · OR699050.1 · 75,909–77,256 bp · +
petD · OR699050.1 · 77,443–78,661 bp · +
ycf2 · OR699050.1 · 87,188–93,643 bp · +
ycf15 · OR699050.1 · 93,734–93,989 bp · +
ycf15 · OR699050.1 · 93,822–93,989 bp · +
trnV-GAC · OR699050.1 · 100,323–100,394 bp · +
rrn16 · OR699050.1 · 100,622–102,112 bp · +
trnI-GAU · OR699050.1 · 102,412–103,430 bp · +
trnA-UGC · OR699050.1 · 103,495–104,366 bp · +
rrn23 · OR699050.1 · 104,541–107,352 bp · +
rrn4.5 · OR699050.1 · 107,451–107,553 bp · +
rrn5 · OR699050.1 · 107,809–107,929 bp · +
trnR-ACG · OR699050.1 · 108,173–108,246 bp · +
ycf1 · OR699050.1 · 109,099–110,305 bp · +
ycf1 · OR699050.1 · 109,209–110,042 bp · +
rpl32 · OR699050.1 · 113,065–113,226 bp · +
trnL · OR699050.1 · 113,756–113,835 bp · +
ccsA · OR699050.1 · 113,932–114,903 bp · +
trnN-GUU · OR699050.1 · 129,028–129,099 bp · +
rps7 · OR699050.1 · 140,070–140,537 bp · +
ndhB · OR699050.1 · 140,811–143,023 bp · +
ndhB · OR699050.1 · 140,812–141,588 bp · +
ndhB · OR699050.1 · 142,268–143,023 bp · +
trnL-CAA · OR699050.1 · 143,571–143,651 bp · +
trnI-CAU · OR699050.1 · 150,799–150,872 bp · +
rpl23 · OR699050.1 · 151,066–151,341 bp · +
rpl2 · OR699050.1 · 151,360–152,850 bp · +
rps19 · OR699050.1 · 152,912–152,941 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Prostanthera althoferi subsp. althoferi
ANNOTATED PLASTOME
OR699050.1
152,946 bp · 138 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38236 76473 114710 152946 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 ycf1 rpl32 trnL ccsA trnN-GUU rps7 ndhB ndhB ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB ndhB ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
141 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 77 75 Locate
psbA gene − 391 1449 1059 Locate
trnK-UUU gene − 1684 4247 2564 Locate
matK gene − 1972 3507 1536 Locate
rps16 gene − 5158 6284 1127 Locate
trnQ-UUG gene − 7322 7393 72 Locate
psbK gene + 7710 7913 204 Locate
psbI gene + 8309 8419 111 Locate
trnS-GCU gene − 8538 8625 88 Locate
trnG-UCC gene + 9364 10134 771 Locate
trnR-UCU gene + 10309 10380 72 Locate
atpA gene − 10477 12000 1524 Locate
atpF gene − 12092 13341 1250 Locate
atpH gene − 13712 13957 246 Locate
atpI gene − 14912 15655 744 Locate
rps2 gene − 15879 16589 711 Locate
rpoC gene − 16809 20978 4170 Locate
rpoC1 gene − 21133 23974 2842 Locate
rpoB gene − 24001 27189 3189 Locate
trnC-GCA gene + 28400 28470 71 Locate
petN gene + 29298 29387 90 Locate
psbM gene − 30394 30498 105 Locate
trnD-GUC gene − 31019 31092 74 Locate
trnY-GUA gene − 31201 31284 84 Locate
trnE-UUC gene − 31344 31416 73 Locate
trnT-GGU gene + 31988 32059 72 Locate
psbD gene + 33391 34452 1062 Locate
psbC gene + 34400 35821 1422 Locate
trnS-UGA gene − 36061 36153 93 Locate
psbZ gene + 36473 36661 189 Locate
trnG-GCC gene + 36953 37023 71 Locate
trnfM-CAU gene − 37198 37271 74 Locate
rps14 gene − 37427 37729 303 Locate
psaB gene − 37856 40060 2205 Locate
psaA gene − 40086 42338 2253 Locate
ycf3 gene − 43117 45077 1961 Locate
trnS-GGA gene + 45913 45999 87 Locate
rps4 gene − 46274 46879 606 Locate
trnT-UGU gene − 47282 47354 73 Locate
trnL-UAA gene + 48054 48638 585 Locate
trnF-GAA gene + 48973 49045 73 Locate
ndhJ gene − 49696 50172 477 Locate
ndhK gene − 50273 50950 678 Locate
ndhC gene − 51004 51366 363 Locate
trnV-UAC gene − 52416 53067 652 Locate
trnM-CAU gene + 53246 53318 73 Locate
atpE gene − 53551 53952 402 Locate
atpB gene − 53949 55454 1506 Locate
rbcL gene + 56241 57680 1440 Locate
accD gene + 58359 59867 1509 Locate
psaI gene + 60559 60669 111 Locate
ycf4 gene + 61109 61663 555 Locate
cemA gene + 62297 62986 690 Locate
petA gene + 63180 64142 963 Locate
psbJ gene − 65156 65278 123 Locate
psbL gene − 65414 65530 117 Locate
psbF gene − 65554 65673 120 Locate
psbE gene − 65688 65939 252 Locate
petL gene + 66873 66968 96 Locate
petG gene + 67149 67262 114 Locate
trnW-CCA gene − 67384 67457 74 Locate
trnP-UGG gene − 67620 67693 74 Locate
psaJ gene + 68090 68224 135 Locate
rpl33 gene + 68702 68902 201 Locate
rps18 gene + 69065 69370 306 Locate
rpl20 gene − 69559 69945 387 Locate
rps12 gene − 70785 70898 114 Locate
clpP gene − 71029 72954 1926 Locate
psbB gene + 73426 74952 1527 Locate
psbT gene + 75158 75265 108 Locate
psbN gene − 75326 75457 132 Locate
psbH gene + 75545 75784 240 Locate
petB gene + 75909 77256 1348 Locate
petD gene + 77443 78661 1219 Locate
rpoA gene − 78828 79838 1011 Locate
rps11 gene − 79916 80332 417 Locate
rpl36 gene − 80435 80548 114 Locate
infA gene − 80644 80877 234 Locate
rps8 gene − 81002 81406 405 Locate
rpl14 gene − 81590 81958 369 Locate
rpl16 gene − 82085 83386 1302 Locate
rps3 gene − 83526 84185 660 Locate
rpl22 gene − 84192 84635 444 Locate
rps19 gene − 84708 84986 279 Locate
rpl2 gene − 85042 86532 1491 Locate
rpl23 gene − 86551 86832 282 Locate
trnI-CAU gene − 87027 87100 74 Locate
ycf2 gene + 87188 93643 6456 Locate
ycf15 gene + 93734 93989 256 Locate
ycf15 CDS + 93822 93989 168 Locate
trnL-CAA gene − 94250 94330 81 Locate
ndhB CDS − 94878 95633 756 Locate
ndhB gene − 94878 97090 2213 Locate
ndhB CDS − 96313 97089 777 Locate
rps7 gene − 97364 97831 468 Locate
rps12 gene − 97885 98678 794 Locate
trnV-GAC gene + 100323 100394 72 Locate
rrn16 gene + 100622 102112 1491 Locate
trnI-GAU gene + 102412 103430 1019 Locate
trnA-UGC gene + 103495 104366 872 Locate
rrn23 gene + 104541 107352 2812 Locate
rrn4.5 gene + 107451 107553 103 Locate
rrn5 gene + 107809 107929 121 Locate
trnR-ACG gene + 108173 108246 74 Locate
trnN-GUU gene − 108809 108880 72 Locate
ycf1 gene + 109099 110305 1207 Locate
ycf1 CDS + 109209 110042 834 Locate
ndhF gene − 110302 112545 2244 Locate
rpl32 gene + 113065 113226 162 Locate
trnL gene + 113756 113835 80 Locate
ccsA gene + 113932 114903 972 Locate
ndhD gene − 115138 116649 1512 Locate
psaC gene − 116750 116995 246 Locate
ndhE gene − 117244 117549 306 Locate
ndhG gene − 117763 118293 531 Locate
ndhI gene − 118638 119144 507 Locate
ndhA gene − 119219 121289 2071 Locate
ndhH gene − 121291 122472 1182 Locate
rps15 gene − 122569 122832 264 Locate
ycf1 gene − 123242 128809 5568 Locate
trnN-GUU gene + 129028 129099 72 Locate
trnR-ACG gene − 129662 129735 74 Locate
rrn5 gene − 129979 130099 121 Locate
rrn4.5 gene − 130355 130457 103 Locate
rrn23 gene − 130556 133367 2812 Locate
trnA-UGC gene − 133542 134413 872 Locate
trnI-GAU gene − 134478 135496 1019 Locate
rrn16 gene − 135796 137286 1491 Locate
trnV-GAC gene − 137514 137585 72 Locate
rps7 gene + 140070 140537 468 Locate
ndhB gene + 140811 143023 2213 Locate
ndhB CDS + 140812 141588 777 Locate
ndhB CDS + 142268 143023 756 Locate
trnL-CAA gene + 143571 143651 81 Locate
ycf15 CDS − 143912 144064 153 Locate
ycf15 gene − 143912 144168 257 Locate
ycf2 gene − 144259 150711 6453 Locate
trnI-CAU gene + 150799 150872 74 Locate
rpl23 gene + 151066 151341 276 Locate
rpl2 gene + 151360 152850 1491 Locate
rps19 gene + 152912 152941 30 Locate
Status Available
Accession OR699050.1
Length 152,946 bp
GC content 37.9%
Annotated genes 138
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 18 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 16 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources