Prostanthera althoferi x Prostanthera campbellii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_084413.1 · 3–77 bp · −
psbA · NC_084413.1 · 391–1,449 bp · −
trnK-UUU · NC_084413.1 · 1,684–4,247 bp · −
trnK-UUU · NC_084413.1 · 1,973–3,508 bp · −
rps16 · NC_084413.1 · 5,125–6,258 bp · −
trnQ-UUG · NC_084413.1 · 7,273–7,344 bp · −
trnS-GCU · NC_084413.1 · 8,490–8,577 bp · −
atpA · NC_084413.1 · 10,444–11,967 bp · −
atpF · NC_084413.1 · 12,051–13,299 bp · −
atpH · NC_084413.1 · 13,671–13,916 bp · −
atpI · NC_084413.1 · 14,866–15,609 bp · −
rps2 · NC_084413.1 · 15,833–16,543 bp · −
rpoC · NC_084413.1 · 16,766–20,935 bp · −
rpoC1 · NC_084413.1 · 21,090–23,924 bp · −
rpoB · NC_084413.1 · 23,951–27,139 bp · −
psbM · NC_084413.1 · 30,334–30,438 bp · −
trnD-GUC · NC_084413.1 · 30,965–31,038 bp · −
trnY-GUA · NC_084413.1 · 31,147–31,230 bp · −
trnE-UUC · NC_084413.1 · 31,290–31,362 bp · −
trnS-UGA · NC_084413.1 · 36,004–36,096 bp · −
trnfM-CAU · NC_084413.1 · 37,125–37,198 bp · −
rps14 · NC_084413.1 · 37,354–37,656 bp · −
psaB · NC_084413.1 · 37,782–39,986 bp · −
psaA · NC_084413.1 · 40,012–42,264 bp · −
ycf3 · NC_084413.1 · 43,031–44,995 bp · −
rps4 · NC_084413.1 · 46,183–46,788 bp · −
trnT-UGU · NC_084413.1 · 47,207–47,279 bp · −
ndhJ · NC_084413.1 · 49,590–50,066 bp · −
ndhK · NC_084413.1 · 50,167–50,844 bp · −
ndhC · NC_084413.1 · 50,898–51,260 bp · −
trnV-UAC · NC_084413.1 · 52,322–52,976 bp · −
atpE · NC_084413.1 · 53,460–53,861 bp · −
atpB · NC_084413.1 · 53,858–55,363 bp · −
psbJ · NC_084413.1 · 65,041–65,163 bp · −
psbL · NC_084413.1 · 65,299–65,415 bp · −
psbF · NC_084413.1 · 65,439–65,558 bp · −
psbE · NC_084413.1 · 65,573–65,824 bp · −
trnW-CCA · NC_084413.1 · 67,263–67,336 bp · −
trnP-UGG · NC_084413.1 · 67,499–67,572 bp · −
rpl20 · NC_084413.1 · 69,449–69,835 bp · −
rps12 · NC_084413.1 · 70,674–70,787 bp · −
rps12 · NC_084413.1 · 97,731–98,524 bp · −
clpP · NC_084413.1 · 70,915–72,850 bp · −
clpP · NC_084413.1 · 72,782–72,850 bp · −
clpP · NC_084413.1 · 71,774–72,064 bp · −
clpP · NC_084413.1 · 70,918–71,142 bp · −
psbN · NC_084413.1 · 75,214–75,345 bp · −
rpoA · NC_084413.1 · 78,714–79,727 bp · −
rps11 · NC_084413.1 · 79,805–80,221 bp · −
rpl36 · NC_084413.1 · 80,324–80,437 bp · −
infA · NC_084413.1 · 80,533–80,766 bp · −
rps8 · NC_084413.1 · 80,891–81,295 bp · −
rpl14 · NC_084413.1 · 81,473–81,841 bp · −
rpl16 · NC_084413.1 · 81,967–83,263 bp · −
rps3 · NC_084413.1 · 83,412–84,071 bp · −
rpl22 · NC_084413.1 · 84,078–84,521 bp · −
rps19 · NC_084413.1 · 84,588–84,866 bp · −
rpl2 · NC_084413.1 · 84,921–86,411 bp · −
rpl23 · NC_084413.1 · 86,430–86,711 bp · −
trnI-CAU · NC_084413.1 · 86,906–86,979 bp · −
trnL-CAA · NC_084413.1 · 94,096–94,176 bp · −
ndhB · NC_084413.1 · 96,159–96,935 bp · −
ndhB · NC_084413.1 · 94,724–95,479 bp · −
ndhB · NC_084413.1 · 94,724–96,936 bp · −
rps7 · NC_084413.1 · 97,210–97,677 bp · −
trnN-GUU · NC_084413.1 · 108,648–108,719 bp · −
ndhF · NC_084413.1 · 110,144–112,393 bp · −
ndhD · NC_084413.1 · 114,978–116,498 bp · −
psaC · NC_084413.1 · 116,593–116,838 bp · −
ndhE · NC_084413.1 · 117,097–117,402 bp · −
ndhG · NC_084413.1 · 117,616–118,146 bp · −
ndhI · NC_084413.1 · 118,494–119,000 bp · −
ndhA · NC_084413.1 · 119,075–121,147 bp · −
ndhH · NC_084413.1 · 121,149–122,330 bp · −
rps15 · NC_084413.1 · 122,427–122,690 bp · −
ycf1 · NC_084413.1 · 123,103–128,655 bp · −
trnR-ACG · NC_084413.1 · 129,502–129,575 bp · −
rrn5 · NC_084413.1 · 129,819–129,939 bp · −
rrn4.5 · NC_084413.1 · 130,195–130,297 bp · −
rrn23 · NC_084413.1 · 130,396–133,207 bp · −
trnA-UGC · NC_084413.1 · 133,377–134,248 bp · −
trnI-GAU · NC_084413.1 · 134,313–135,331 bp · −
rrn16 · NC_084413.1 · 135,631–137,121 bp · −
trnV-GAC · NC_084413.1 · 137,349–137,420 bp · −
ycf15 · NC_084413.1 · 143,752–143,904 bp · −
ycf15 · NC_084413.1 · 143,752–144,008 bp · −
ycf2 · NC_084413.1 · 144,099–150,551 bp · −
psbK · NC_084413.1 · 7,661–7,864 bp · +
psbI · NC_084413.1 · 8,262–8,372 bp · +
trnG-UCC · NC_084413.1 · 9,322–10,101 bp · +
trnR-UCU · NC_084413.1 · 10,276–10,347 bp · +
trnC-GCA · NC_084413.1 · 28,350–28,420 bp · +
petN · NC_084413.1 · 29,242–29,331 bp · +
trnT-GGU · NC_084413.1 · 31,939–32,010 bp · +
psbD · NC_084413.1 · 33,340–34,401 bp · +
psbC · NC_084413.1 · 34,349–35,770 bp · +
psbZ · NC_084413.1 · 36,420–36,608 bp · +
trnG-GCC · NC_084413.1 · 36,895–36,965 bp · +
trnS-GGA · NC_084413.1 · 45,831–45,917 bp · +
trnL-UAA · NC_084413.1 · 47,959–48,545 bp · +
trnF-GAA · NC_084413.1 · 48,878–48,950 bp · +
trnM-CAU · NC_084413.1 · 53,155–53,227 bp · +
rbcL · NC_084413.1 · 56,150–57,589 bp · +
accD · NC_084413.1 · 58,278–59,768 bp · +
psaI · NC_084413.1 · 60,457–60,567 bp · +
ycf4 · NC_084413.1 · 61,007–61,561 bp · +
cemA · NC_084413.1 · 62,186–62,875 bp · +
petA · NC_084413.1 · 63,069–64,031 bp · +
petL · NC_084413.1 · 66,752–66,847 bp · +
petG · NC_084413.1 · 67,028–67,141 bp · +
psaJ · NC_084413.1 · 67,979–68,113 bp · +
rpl33 · NC_084413.1 · 68,592–68,792 bp · +
rps18 · NC_084413.1 · 68,955–69,260 bp · +
psbB · NC_084413.1 · 73,322–74,848 bp · +
psbT · NC_084413.1 · 75,046–75,153 bp · +
psbH · NC_084413.1 · 75,433–75,672 bp · +
petB · NC_084413.1 · 75,797–77,142 bp · +
petD · NC_084413.1 · 77,329–78,547 bp · +
ycf2 · NC_084413.1 · 87,073–93,489 bp · +
ycf15 · NC_084413.1 · 93,580–93,835 bp · +
ycf15 · NC_084413.1 · 93,668–93,835 bp · +
trnV-GAC · NC_084413.1 · 100,174–100,245 bp · +
rrn16 · NC_084413.1 · 100,473–101,963 bp · +
trnI-GAU · NC_084413.1 · 102,263–103,281 bp · +
trnA-UGC · NC_084413.1 · 103,346–104,217 bp · +
rrn23 · NC_084413.1 · 104,387–107,198 bp · +
rrn4.5 · NC_084413.1 · 107,297–107,399 bp · +
rrn5 · NC_084413.1 · 107,654–107,774 bp · +
trnR-ACG · NC_084413.1 · 108,018–108,091 bp · +
ycf1 · NC_084413.1 · 108,938–110,147 bp · +
ycf1 · NC_084413.1 · 109,051–109,884 bp · +
rpl32 · NC_084413.1 · 112,911–113,072 bp · +
trnL · NC_084413.1 · 113,591–113,670 bp · +
ccsA · NC_084413.1 · 113,767–114,738 bp · +
trnN-GUU · NC_084413.1 · 128,874–128,945 bp · +
rps7 · NC_084413.1 · 139,910–140,377 bp · +
ndhB · NC_084413.1 · 140,651–142,863 bp · +
ndhB · NC_084413.1 · 140,652–141,428 bp · +
ndhB · NC_084413.1 · 142,108–142,863 bp · +
trnL-CAA · NC_084413.1 · 143,411–143,491 bp · +
trnI-CAU · NC_084413.1 · 150,645–150,718 bp · +
rpl23 · NC_084413.1 · 150,893–151,174 bp · +
rpl2 · NC_084413.1 · 151,193–152,683 bp · +
rps19 · NC_084413.1 · 152,744–152,773 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Prostanthera althoferi x Prostanthera campbellii
ANNOTATED PLASTOME
NC_084413.1
152,778 bp · 139 genes
Gene function
Transfer RNA
Photosystem II
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
Other
NADH dehydrogenase
Ribosomal RNA
0 38194 76389 114584 152778 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 ycf1 rpl32 trnL ccsA trnN-GUU rps7 ndhB ndhB ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU trnK-UUU rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP clpP clpP clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB ndhB ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
144 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 77 75 Locate
psbA gene − 391 1449 1059 Locate
trnK-UUU gene − 1684 4247 2564 Locate
trnK-UUU CDS − 1973 3508 1536 Locate
rps16 gene − 5125 6258 1134 Locate
trnQ-UUG gene − 7273 7344 72 Locate
psbK gene + 7661 7864 204 Locate
psbI gene + 8262 8372 111 Locate
trnS-GCU gene − 8490 8577 88 Locate
trnG-UCC gene + 9322 10101 780 Locate
trnR-UCU gene + 10276 10347 72 Locate
atpA gene − 10444 11967 1524 Locate
atpF gene − 12051 13299 1249 Locate
atpH gene − 13671 13916 246 Locate
atpI gene − 14866 15609 744 Locate
rps2 gene − 15833 16543 711 Locate
rpoC gene − 16766 20935 4170 Locate
rpoC1 gene − 21090 23924 2835 Locate
rpoB gene − 23951 27139 3189 Locate
trnC-GCA gene + 28350 28420 71 Locate
petN gene + 29242 29331 90 Locate
psbM gene − 30334 30438 105 Locate
trnD-GUC gene − 30965 31038 74 Locate
trnY-GUA gene − 31147 31230 84 Locate
trnE-UUC gene − 31290 31362 73 Locate
trnT-GGU gene + 31939 32010 72 Locate
psbD gene + 33340 34401 1062 Locate
psbC gene + 34349 35770 1422 Locate
trnS-UGA gene − 36004 36096 93 Locate
psbZ gene + 36420 36608 189 Locate
trnG-GCC gene + 36895 36965 71 Locate
trnfM-CAU gene − 37125 37198 74 Locate
rps14 gene − 37354 37656 303 Locate
psaB gene − 37782 39986 2205 Locate
psaA gene − 40012 42264 2253 Locate
ycf3 gene − 43031 44995 1965 Locate
trnS-GGA gene + 45831 45917 87 Locate
rps4 gene − 46183 46788 606 Locate
trnT-UGU gene − 47207 47279 73 Locate
trnL-UAA gene + 47959 48545 587 Locate
trnF-GAA gene + 48878 48950 73 Locate
ndhJ gene − 49590 50066 477 Locate
ndhK gene − 50167 50844 678 Locate
ndhC gene − 50898 51260 363 Locate
trnV-UAC gene − 52322 52976 655 Locate
trnM-CAU gene + 53155 53227 73 Locate
atpE gene − 53460 53861 402 Locate
atpB gene − 53858 55363 1506 Locate
rbcL gene + 56150 57589 1440 Locate
accD gene + 58278 59768 1491 Locate
psaI gene + 60457 60567 111 Locate
ycf4 gene + 61007 61561 555 Locate
cemA gene + 62186 62875 690 Locate
petA gene + 63069 64031 963 Locate
psbJ gene − 65041 65163 123 Locate
psbL gene − 65299 65415 117 Locate
psbF gene − 65439 65558 120 Locate
psbE gene − 65573 65824 252 Locate
petL gene + 66752 66847 96 Locate
petG gene + 67028 67141 114 Locate
trnW-CCA gene − 67263 67336 74 Locate
trnP-UGG gene − 67499 67572 74 Locate
psaJ gene + 67979 68113 135 Locate
rpl33 gene + 68592 68792 201 Locate
rps18 gene + 68955 69260 306 Locate
rpl20 gene − 69449 69835 387 Locate
rps12 gene − 70674 70787 114 Locate
clpP gene − 70915 72850 1936 Locate
clpP CDS − 70918 71142 225 Locate
clpP CDS − 71774 72064 291 Locate
clpP CDS − 72782 72850 69 Locate
psbB gene + 73322 74848 1527 Locate
psbT gene + 75046 75153 108 Locate
psbN gene − 75214 75345 132 Locate
psbH gene + 75433 75672 240 Locate
petB gene + 75797 77142 1346 Locate
petD gene + 77329 78547 1219 Locate
rpoA gene − 78714 79727 1014 Locate
rps11 gene − 79805 80221 417 Locate
rpl36 gene − 80324 80437 114 Locate
infA gene − 80533 80766 234 Locate
rps8 gene − 80891 81295 405 Locate
rpl14 gene − 81473 81841 369 Locate
rpl16 gene − 81967 83263 1297 Locate
rps3 gene − 83412 84071 660 Locate
rpl22 gene − 84078 84521 444 Locate
rps19 gene − 84588 84866 279 Locate
rpl2 gene − 84921 86411 1491 Locate
rpl23 gene − 86430 86711 282 Locate
trnI-CAU gene − 86906 86979 74 Locate
ycf2 gene + 87073 93489 6417 Locate
ycf15 gene + 93580 93835 256 Locate
ycf15 CDS + 93668 93835 168 Locate
trnL-CAA gene − 94096 94176 81 Locate
ndhB CDS − 94724 95479 756 Locate
ndhB gene − 94724 96936 2213 Locate
ndhB CDS − 96159 96935 777 Locate
rps7 gene − 97210 97677 468 Locate
rps12 gene − 97731 98524 794 Locate
trnV-GAC gene + 100174 100245 72 Locate
rrn16 gene + 100473 101963 1491 Locate
trnI-GAU gene + 102263 103281 1019 Locate
trnA-UGC gene + 103346 104217 872 Locate
rrn23 gene + 104387 107198 2812 Locate
rrn4.5 gene + 107297 107399 103 Locate
rrn5 gene + 107654 107774 121 Locate
trnR-ACG gene + 108018 108091 74 Locate
trnN-GUU gene − 108648 108719 72 Locate
ycf1 gene + 108938 110147 1210 Locate
ycf1 CDS + 109051 109884 834 Locate
ndhF gene − 110144 112393 2250 Locate
rpl32 gene + 112911 113072 162 Locate
trnL gene + 113591 113670 80 Locate
ccsA gene + 113767 114738 972 Locate
ndhD gene − 114978 116498 1521 Locate
psaC gene − 116593 116838 246 Locate
ndhE gene − 117097 117402 306 Locate
ndhG gene − 117616 118146 531 Locate
ndhI gene − 118494 119000 507 Locate
ndhA gene − 119075 121147 2073 Locate
ndhH gene − 121149 122330 1182 Locate
rps15 gene − 122427 122690 264 Locate
ycf1 gene − 123103 128655 5553 Locate
trnN-GUU gene + 128874 128945 72 Locate
trnR-ACG gene − 129502 129575 74 Locate
rrn5 gene − 129819 129939 121 Locate
rrn4.5 gene − 130195 130297 103 Locate
rrn23 gene − 130396 133207 2812 Locate
trnA-UGC gene − 133377 134248 872 Locate
trnI-GAU gene − 134313 135331 1019 Locate
rrn16 gene − 135631 137121 1491 Locate
trnV-GAC gene − 137349 137420 72 Locate
rps7 gene + 139910 140377 468 Locate
ndhB gene + 140651 142863 2213 Locate
ndhB CDS + 140652 141428 777 Locate
ndhB CDS + 142108 142863 756 Locate
trnL-CAA gene + 143411 143491 81 Locate
ycf15 CDS − 143752 143904 153 Locate
ycf15 gene − 143752 144008 257 Locate
ycf2 gene − 144099 150551 6453 Locate
trnI-CAU gene + 150645 150718 74 Locate
rpl23 gene + 150893 151174 282 Locate
rpl2 gene + 151193 152683 1491 Locate
rps19 gene + 152744 152773 30 Locate
Status Available
Accession NC_084413.1
Length 152,778 bp
GC content 38.0%
Annotated genes 139
Gene sequence records 7
Translation Rna 38 Photosystem Ii 15 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Other 20 Nad Dehydrogenase 16 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources