Salvia chinensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV591959.1 · 11–84 bp · −
psbA · PV591959.1 · 392–1,450 bp · −
trnK-UUU · PV591959.1 · 1,673–4,266 bp · −
matK · PV591959.1 · 1,972–3,534 bp · −
rps16 · PV591959.1 · 4,836–5,946 bp · −
trnQ-UUG · PV591959.1 · 6,916–6,987 bp · −
trnS-GCU · PV591959.1 · 8,220–8,307 bp · −
atpA · PV591959.1 · 10,110–11,633 bp · −
atpF · PV591959.1 · 11,731–12,974 bp · −
atpH · PV591959.1 · 13,248–13,493 bp · −
atpI · PV591959.1 · 14,463–15,206 bp · −
rps2 · PV591959.1 · 15,433–16,143 bp · −
rpoC2 · PV591959.1 · 16,351–20,538 bp · −
rpoC1 · PV591959.1 · 20,696–23,509 bp · −
rpoB · PV591959.1 · 23,536–26,748 bp · −
psbM · PV591959.1 · 29,182–29,286 bp · −
trnD-GUC · PV591959.1 · 29,807–29,880 bp · −
trnY-GUA · PV591959.1 · 29,991–30,074 bp · −
trnE-UUC · PV591959.1 · 30,146–30,218 bp · −
trnS-UGA · PV591959.1 · 34,884–34,976 bp · −
trnfM-CAU · PV591959.1 · 36,021–36,094 bp · −
rps14 · PV591959.1 · 36,239–36,541 bp · −
psaB · PV591959.1 · 36,664–38,868 bp · −
psaA · PV591959.1 · 38,894–41,146 bp · −
ycf3 · PV591959.1 · 41,930–43,874 bp · −
rps4 · PV591959.1 · 45,054–45,659 bp · −
trnT-UGU · PV591959.1 · 46,033–46,105 bp · −
ndhJ · PV591959.1 · 48,224–48,700 bp · −
ndhK · PV591959.1 · 48,811–49,488 bp · −
ndhC · PV591959.1 · 49,541–49,903 bp · −
trnV-UAC · PV591959.1 · 50,852–51,500 bp · −
atpE · PV591959.1 · 51,957–52,358 bp · −
atpB · PV591959.1 · 52,355–53,851 bp · −
psbJ · PV591959.1 · 63,304–63,426 bp · −
psbL · PV591959.1 · 63,556–63,672 bp · −
psbF · PV591959.1 · 63,696–63,815 bp · −
psbE · PV591959.1 · 63,830–64,081 bp · −
trnW-CCA · PV591959.1 · 65,390–65,463 bp · −
trnP-UGG · PV591959.1 · 65,634–65,707 bp · −
rpl20 · PV591959.1 · 67,487–67,873 bp · −
rps12 · PV591959.1 · 68,686–68,799 bp · −
rps12 · PV591959.1 · 96,093–96,876 bp · −
clpP · PV591959.1 · 68,924–70,834 bp · −
psbN · PV591959.1 · 73,167–73,298 bp · −
rpoA · PV591959.1 · 76,668–77,675 bp · −
rps11 · PV591959.1 · 77,747–78,163 bp · −
rpl36 · PV591959.1 · 78,273–78,386 bp · −
infA · PV591959.1 · 78,482–78,715 bp · −
rps8 · PV591959.1 · 78,842–79,246 bp · −
rpl14 · PV591959.1 · 79,434–79,802 bp · −
rpl16 · PV591959.1 · 79,934–81,213 bp · −
rps3 · PV591959.1 · 81,349–82,011 bp · −
rpl22 · PV591959.1 · 81,996–82,463 bp · −
rps19 · PV591959.1 · 82,533–82,811 bp · −
rpl2 · PV591959.1 · 82,871–84,353 bp · −
rpl23 · PV591959.1 · 84,372–84,653 bp · −
trnI-CAU · PV591959.1 · 84,819–84,892 bp · −
trnL-CAA · PV591959.1 · 92,450–92,530 bp · −
ndhB · PV591959.1 · 93,090–95,243 bp · −
rps7 · PV591959.1 · 95,572–96,039 bp · −
trnN-GUU · PV591959.1 · 106,869–106,940 bp · −
ndhF · PV591959.1 · 108,294–110,510 bp · −
ndhD · PV591959.1 · 113,216–114,757 bp · −
psaC · PV591959.1 · 114,867–115,112 bp · −
ndhE · PV591959.1 · 115,363–115,668 bp · −
ndhG · PV591959.1 · 115,884–116,414 bp · −
ndhI · PV591959.1 · 116,791–117,297 bp · −
ndhA · PV591959.1 · 117,378–119,469 bp · −
ndhH · PV591959.1 · 119,471–120,652 bp · −
rps15 · PV591959.1 · 120,752–121,024 bp · −
ycf1 · PV591959.1 · 121,450–126,957 bp · −
trnR-ACG · PV591959.1 · 127,878–127,951 bp · −
rrn5S · PV591959.1 · 128,195–128,315 bp · −
rrn4.5S · PV591959.1 · 128,540–128,642 bp · −
rrn23S · PV591959.1 · 128,741–131,551 bp · −
trnA-UGC · PV591959.1 · 131,717–132,584 bp · −
trnI-GAU · PV591959.1 · 132,649–133,660 bp · −
rrn16S · PV591959.1 · 133,959–135,449 bp · −
trnV-GAC · PV591959.1 · 135,676–135,747 bp · −
ycf15 · PV591959.1 · 142,038–142,235 bp · −
ycf2 · PV591959.1 · 142,377–149,246 bp · −
psbK · PV591959.1 · 7,380–7,559 bp · +
psbI · PV591959.1 · 7,956–8,066 bp · +
trnG-UCC · PV591959.1 · 8,992–9,744 bp · +
trnR-UCU · PV591959.1 · 9,927–9,998 bp · +
trnC-GCA · PV591959.1 · 27,892–27,962 bp · +
petN · PV591959.1 · 28,125–28,214 bp · +
trnT-GGU · PV591959.1 · 30,757–30,828 bp · +
psbD · PV591959.1 · 32,208–33,269 bp · +
psbC · PV591959.1 · 33,217–34,638 bp · +
psbZ · PV591959.1 · 35,311–35,499 bp · +
trnG-GCC · PV591959.1 · 35,771–35,841 bp · +
trnS-GGA · PV591959.1 · 44,691–44,777 bp · +
trnL-UAA · PV591959.1 · 46,781–47,320 bp · +
trnF-GAA · PV591959.1 · 47,619–47,691 bp · +
trnM-CAU · PV591959.1 · 51,689–51,761 bp · +
rbcL · PV591959.1 · 54,636–56,069 bp · +
accD · PV591959.1 · 56,760–58,247 bp · +
psaI · PV591959.1 · 58,721–58,831 bp · +
ycf4 · PV591959.1 · 59,286–59,840 bp · +
cemA · PV591959.1 · 60,388–61,077 bp · +
petA · PV591959.1 · 61,283–62,245 bp · +
petL · PV591959.1 · 64,888–64,983 bp · +
petG · PV591959.1 · 65,162–65,275 bp · +
psaJ · PV591959.1 · 65,998–66,132 bp · +
rpl33 · PV591959.1 · 66,584–66,784 bp · +
rps18 · PV591959.1 · 66,950–67,255 bp · +
rps12 · PV591959.1 · 137,351–138,134 bp · +
psbB · PV591959.1 · 71,294–72,820 bp · +
psbT · PV591959.1 · 72,999–73,106 bp · +
psbH · PV591959.1 · 73,404–73,625 bp · +
petB · PV591959.1 · 73,751–75,101 bp · +
petD · PV591959.1 · 75,295–76,491 bp · +
ycf2 · PV591959.1 · 84,981–91,850 bp · +
ycf15 · PV591959.1 · 91,992–92,189 bp · +
trnV-GAC · PV591959.1 · 98,480–98,551 bp · +
rrn16S · PV591959.1 · 98,778–100,268 bp · +
trnI-GAU · PV591959.1 · 100,567–101,578 bp · +
trnA-UGC · PV591959.1 · 101,643–102,510 bp · +
rrn23S · PV591959.1 · 102,676–105,486 bp · +
rrn4.5S · PV591959.1 · 105,585–105,687 bp · +
rrn5S · PV591959.1 · 105,912–106,032 bp · +
trnR-ACG · PV591959.1 · 106,276–106,349 bp · +
rpl32 · PV591959.1 · 110,962–111,132 bp · +
trnL-UAG · PV591959.1 · 111,836–111,915 bp · +
ccsA · PV591959.1 · 112,008–112,985 bp · +
trnN-GUU · PV591959.1 · 127,287–127,358 bp · +
rps7 · PV591959.1 · 138,188–138,655 bp · +
ndhB · PV591959.1 · 138,984–141,137 bp · +
trnL-CAA · PV591959.1 · 141,697–141,777 bp · +
trnI-CAU · PV591959.1 · 149,335–149,408 bp · +
rpl23 · PV591959.1 · 149,574–149,855 bp · +
rpl2 · PV591959.1 · 149,874–151,356 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia chinensis
ANNOTATED PLASTOME
PV591959.1
151,458 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37864 75729 113594 151458 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1673 4266 2594 Locate
matK gene − 1972 3534 1563 Locate
rps16 gene − 4836 5946 1111 Locate
trnQ-UUG gene − 6916 6987 72 Locate
psbK gene + 7380 7559 180 Locate
psbI gene + 7956 8066 111 Locate
trnS-GCU gene − 8220 8307 88 Locate
trnG-UCC gene + 8992 9744 753 Locate
trnR-UCU gene + 9927 9998 72 Locate
atpA gene − 10110 11633 1524 Locate
atpF gene − 11731 12974 1244 Locate
atpH gene − 13248 13493 246 Locate
atpI gene − 14463 15206 744 Locate
rps2 gene − 15433 16143 711 Locate
rpoC2 gene − 16351 20538 4188 Locate
rpoC1 gene − 20696 23509 2814 Locate
rpoB gene − 23536 26748 3213 Locate
trnC-GCA gene + 27892 27962 71 Locate
petN gene + 28125 28214 90 Locate
psbM gene − 29182 29286 105 Locate
trnD-GUC gene − 29807 29880 74 Locate
trnY-GUA gene − 29991 30074 84 Locate
trnE-UUC gene − 30146 30218 73 Locate
trnT-GGU gene + 30757 30828 72 Locate
psbD gene + 32208 33269 1062 Locate
psbC gene + 33217 34638 1422 Locate
trnS-UGA gene − 34884 34976 93 Locate
psbZ gene + 35311 35499 189 Locate
trnG-GCC gene + 35771 35841 71 Locate
trnfM-CAU gene − 36021 36094 74 Locate
rps14 gene − 36239 36541 303 Locate
psaB gene − 36664 38868 2205 Locate
psaA gene − 38894 41146 2253 Locate
ycf3 gene − 41930 43874 1945 Locate
trnS-GGA gene + 44691 44777 87 Locate
rps4 gene − 45054 45659 606 Locate
trnT-UGU gene − 46033 46105 73 Locate
trnL-UAA gene + 46781 47320 540 Locate
trnF-GAA gene + 47619 47691 73 Locate
ndhJ gene − 48224 48700 477 Locate
ndhK gene − 48811 49488 678 Locate
ndhC gene − 49541 49903 363 Locate
trnV-UAC gene − 50852 51500 649 Locate
trnM-CAU gene + 51689 51761 73 Locate
atpE gene − 51957 52358 402 Locate
atpB gene − 52355 53851 1497 Locate
rbcL gene + 54636 56069 1434 Locate
accD gene + 56760 58247 1488 Locate
psaI gene + 58721 58831 111 Locate
ycf4 gene + 59286 59840 555 Locate
cemA gene + 60388 61077 690 Locate
petA gene + 61283 62245 963 Locate
psbJ gene − 63304 63426 123 Locate
psbL gene − 63556 63672 117 Locate
psbF gene − 63696 63815 120 Locate
psbE gene − 63830 64081 252 Locate
petL gene + 64888 64983 96 Locate
petG gene + 65162 65275 114 Locate
trnW-CCA gene − 65390 65463 74 Locate
trnP-UGG gene − 65634 65707 74 Locate
psaJ gene + 65998 66132 135 Locate
rpl33 gene + 66584 66784 201 Locate
rps18 gene + 66950 67255 306 Locate
rpl20 gene − 67487 67873 387 Locate
rps12 gene − 68686 68799 114 Locate
clpP gene − 68924 70834 1911 Locate
psbB gene + 71294 72820 1527 Locate
psbT gene + 72999 73106 108 Locate
psbN gene − 73167 73298 132 Locate
psbH gene + 73404 73625 222 Locate
petB gene + 73751 75101 1351 Locate
petD gene + 75295 76491 1197 Locate
rpoA gene − 76668 77675 1008 Locate
rps11 gene − 77747 78163 417 Locate
rpl36 gene − 78273 78386 114 Locate
infA gene − 78482 78715 234 Locate
rps8 gene − 78842 79246 405 Locate
rpl14 gene − 79434 79802 369 Locate
rpl16 gene − 79934 81213 1280 Locate
rps3 gene − 81349 82011 663 Locate
rpl22 gene − 81996 82463 468 Locate
rps19 gene − 82533 82811 279 Locate
rpl2 gene − 82871 84353 1483 Locate
rpl23 gene − 84372 84653 282 Locate
trnI-CAU gene − 84819 84892 74 Locate
ycf2 gene + 84981 91850 6870 Locate
ycf15 gene + 91992 92189 198 Locate
trnL-CAA gene − 92450 92530 81 Locate
ndhB gene − 93090 95243 2154 Locate
rps7 gene − 95572 96039 468 Locate
rps12 gene − 96093 96876 784 Locate
trnV-GAC gene + 98480 98551 72 Locate
rrn16S gene + 98778 100268 1491 Locate
trnI-GAU gene + 100567 101578 1012 Locate
trnA-UGC gene + 101643 102510 868 Locate
rrn23S gene + 102676 105486 2811 Locate
rrn4.5S gene + 105585 105687 103 Locate
rrn5S gene + 105912 106032 121 Locate
trnR-ACG gene + 106276 106349 74 Locate
trnN-GUU gene − 106869 106940 72 Locate
ndhF gene − 108294 110510 2217 Locate
rpl32 gene + 110962 111132 171 Locate
trnL-UAG gene + 111836 111915 80 Locate
ccsA gene + 112008 112985 978 Locate
ndhD gene − 113216 114757 1542 Locate
psaC gene − 114867 115112 246 Locate
ndhE gene − 115363 115668 306 Locate
ndhG gene − 115884 116414 531 Locate
ndhI gene − 116791 117297 507 Locate
ndhA gene − 117378 119469 2092 Locate
ndhH gene − 119471 120652 1182 Locate
rps15 gene − 120752 121024 273 Locate
ycf1 gene − 121450 126957 5508 Locate
trnN-GUU gene + 127287 127358 72 Locate
trnR-ACG gene − 127878 127951 74 Locate
rrn5S gene − 128195 128315 121 Locate
rrn4.5S gene − 128540 128642 103 Locate
rrn23S gene − 128741 131551 2811 Locate
trnA-UGC gene − 131717 132584 868 Locate
trnI-GAU gene − 132649 133660 1012 Locate
rrn16S gene − 133959 135449 1491 Locate
trnV-GAC gene − 135676 135747 72 Locate
rps12 gene + 137351 138134 784 Locate
rps7 gene + 138188 138655 468 Locate
ndhB gene + 138984 141137 2154 Locate
trnL-CAA gene + 141697 141777 81 Locate
ycf15 gene − 142038 142235 198 Locate
ycf2 gene − 142377 149246 6870 Locate
trnI-CAU gene + 149335 149408 74 Locate
rpl23 gene + 149574 149855 282 Locate
rpl2 gene + 149874 151356 1483 Locate
Status Available
Accession PV591959.1
Length 151,458 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources