Salvia clevelandii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX971245.1 · 11–84 bp · −
psbA · PX971245.1 · 404–1,462 bp · −
trnK-UUU · PX971245.1 · 1,689–4,267 bp · −
matK · PX971245.1 · 2,001–3,530 bp · −
rps16 · PX971245.1 · 4,818–5,924 bp · −
trnQ-UUG · PX971245.1 · 6,483–6,554 bp · −
trnS-GCU · PX971245.1 · 7,797–7,884 bp · −
atpA · PX971245.1 · 9,685–11,208 bp · −
atpF · PX971245.1 · 11,310–12,552 bp · −
atpH · PX971245.1 · 12,825–13,070 bp · −
atpI · PX971245.1 · 14,100–14,843 bp · −
rps2 · PX971245.1 · 15,068–15,778 bp · −
rpoC2 · PX971245.1 · 15,979–20,166 bp · −
rpoC1 · PX971245.1 · 20,332–23,146 bp · −
rpoB · PX971245.1 · 23,173–26,385 bp · −
psbM · PX971245.1 · 28,845–28,949 bp · −
trnD-GUC · PX971245.1 · 29,464–29,537 bp · −
trnY-GUA · PX971245.1 · 29,648–29,731 bp · −
trnE-UUC · PX971245.1 · 29,803–29,875 bp · −
trnS-UGA · PX971245.1 · 34,546–34,638 bp · −
trnM-CAU · PX971245.1 · 35,655–35,728 bp · −
rps14 · PX971245.1 · 35,873–36,175 bp · −
psaB · PX971245.1 · 36,298–38,502 bp · −
psaA · PX971245.1 · 38,528–40,780 bp · −
ycf3 · PX971245.1 · 41,556–43,500 bp · −
rps4 · PX971245.1 · 44,695–45,300 bp · −
trnT-UGU · PX971245.1 · 45,661–45,733 bp · −
ndhJ · PX971245.1 · 47,906–48,382 bp · −
ndhK · PX971245.1 · 48,493–49,170 bp · −
ndhC · PX971245.1 · 49,222–49,584 bp · −
trnV-UAC · PX971245.1 · 50,530–51,170 bp · −
atpE · PX971245.1 · 51,628–52,029 bp · −
atpB · PX971245.1 · 52,026–53,522 bp · −
psbJ · PX971245.1 · 63,094–63,216 bp · −
psbL · PX971245.1 · 63,351–63,467 bp · −
psbF · PX971245.1 · 63,491–63,610 bp · −
psbE · PX971245.1 · 63,625–63,876 bp · −
trnW-CCA · PX971245.1 · 65,196–65,269 bp · −
trnP-UGG · PX971245.1 · 65,444–65,517 bp · −
rpl20 · PX971245.1 · 67,293–67,679 bp · −
rps12 · PX971245.1 · 68,478–68,591 bp · −
rps12 · PX971245.1 · 95,881–96,674 bp · −
clpP · PX971245.1 · 68,715–70,625 bp · −
psbN · PX971245.1 · 72,955–73,086 bp · −
rpoA · PX971245.1 · 76,470–77,477 bp · −
rps11 · PX971245.1 · 77,547–77,963 bp · −
rpl36 · PX971245.1 · 78,074–78,187 bp · −
infA · PX971245.1 · 78,287–78,520 bp · −
rps8 · PX971245.1 · 78,640–79,044 bp · −
rpl14 · PX971245.1 · 79,229–79,597 bp · −
rpl16 · PX971245.1 · 79,729–80,998 bp · −
rps3 · PX971245.1 · 81,151–81,813 bp · −
rpl22 · PX971245.1 · 81,798–82,265 bp · −
rps19 · PX971245.1 · 82,335–82,613 bp · −
rpl2 · PX971245.1 · 82,673–84,158 bp · −
rpl23 · PX971245.1 · 84,177–84,458 bp · −
trnI-CAU · PX971245.1 · 84,624–84,697 bp · −
trnL-CAA · PX971245.1 · 92,243–92,323 bp · −
ndhB · PX971245.1 · 92,884–95,031 bp · −
rps7 · PX971245.1 · 95,360–95,827 bp · −
trnN-GUU · PX971245.1 · 106,720–106,791 bp · −
ndhF · PX971245.1 · 108,139–110,370 bp · −
ndhD · PX971245.1 · 113,078–114,619 bp · −
psaC · PX971245.1 · 114,720–114,965 bp · −
ndhE · PX971245.1 · 115,216–115,521 bp · −
ndhG · PX971245.1 · 115,734–116,264 bp · −
ndhI · PX971245.1 · 116,643–117,149 bp · −
ndhA · PX971245.1 · 117,225–119,327 bp · −
ndhH · PX971245.1 · 119,329–120,510 bp · −
rps15 · PX971245.1 · 120,610–120,882 bp · −
ycf1 · PX971245.1 · 121,300–126,834 bp · −
trnR-ACG · PX971245.1 · 127,738–127,811 bp · −
rrn5S · PX971245.1 · 128,055–128,175 bp · −
rrn4.5S · PX971245.1 · 128,431–128,533 bp · −
rrn23S · PX971245.1 · 128,632–131,442 bp · −
trnA-UGC · PX971245.1 · 131,602–132,478 bp · −
trnI-GAU · PX971245.1 · 132,543–133,561 bp · −
rrn16S · PX971245.1 · 133,860–135,350 bp · −
trnV-GAC · PX971245.1 · 135,577–135,648 bp · −
ycf15 · PX971245.1 · 141,973–142,170 bp · −
ycf2 · PX971245.1 · 142,312–149,169 bp · −
psbK · PX971245.1 · 6,949–7,134 bp · +
psbI · PX971245.1 · 7,532–7,642 bp · +
trnG-UCC · PX971245.1 · 8,572–9,325 bp · +
trnR-UCU · PX971245.1 · 9,506–9,577 bp · +
trnC-GCA · PX971245.1 · 27,533–27,603 bp · +
petN · PX971245.1 · 27,759–27,848 bp · +
trnT-GGU · PX971245.1 · 30,434–30,505 bp · +
psbD · PX971245.1 · 31,869–32,930 bp · +
psbC · PX971245.1 · 32,878–34,299 bp · +
psbZ · PX971245.1 · 34,961–35,149 bp · +
trnG-GCC · PX971245.1 · 35,427–35,497 bp · +
trnS-GGA · PX971245.1 · 44,325–44,411 bp · +
trnL-UAA · PX971245.1 · 46,407–46,991 bp · +
trnF-GAA · PX971245.1 · 47,294–47,366 bp · +
trnM-CAU · PX971245.1 · 51,351–51,423 bp · +
rbcL · PX971245.1 · 54,330–55,763 bp · +
accD · PX971245.1 · 56,463–57,944 bp · +
psaI · PX971245.1 · 58,409–58,519 bp · +
ycf4 · PX971245.1 · 58,965–59,519 bp · +
cemA · PX971245.1 · 60,173–60,862 bp · +
petA · PX971245.1 · 61,088–62,050 bp · +
petL · PX971245.1 · 64,694–64,789 bp · +
petG · PX971245.1 · 64,968–65,081 bp · +
psaJ · PX971245.1 · 65,802–65,936 bp · +
rpl33 · PX971245.1 · 66,376–66,576 bp · +
rps18 · PX971245.1 · 66,754–67,059 bp · +
rps12 · PX971245.1 · 137,281–138,074 bp · +
psbB · PX971245.1 · 71,081–72,607 bp · +
psbT · PX971245.1 · 72,788–72,889 bp · +
psbH · PX971245.1 · 73,192–73,413 bp · +
petB · PX971245.1 · 73,539–74,915 bp · +
petD · PX971245.1 · 75,103–76,293 bp · +
ycf2 · PX971245.1 · 84,786–91,643 bp · +
ycf15 · PX971245.1 · 91,785–91,982 bp · +
trnV-GAC · PX971245.1 · 98,307–98,378 bp · +
rrn16S · PX971245.1 · 98,605–100,095 bp · +
trnI-GAU · PX971245.1 · 100,394–101,412 bp · +
trnA-UGC · PX971245.1 · 101,477–102,353 bp · +
rrn23S · PX971245.1 · 102,513–105,323 bp · +
rrn4.5S · PX971245.1 · 105,422–105,524 bp · +
rrn5S · PX971245.1 · 105,780–105,900 bp · +
trnR-ACG · PX971245.1 · 106,144–106,217 bp · +
rpl32 · PX971245.1 · 110,806–110,976 bp · +
trnL-UAG · PX971245.1 · 111,713–111,792 bp · +
ccsA · PX971245.1 · 111,889–112,866 bp · +
trnN-GUU · PX971245.1 · 127,164–127,235 bp · +
rps7 · PX971245.1 · 138,128–138,595 bp · +
ndhB · PX971245.1 · 138,924–141,071 bp · +
trnL-CAA · PX971245.1 · 141,632–141,712 bp · +
trnI-CAU · PX971245.1 · 149,258–149,331 bp · +
rpl23 · PX971245.1 · 149,497–149,778 bp · +
rpl2 · PX971245.1 · 149,797–151,282 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia clevelandii
ANNOTATED PLASTOME
PX971245.1
151,384 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37846 75692 113538 151384 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 404 1462 1059 Locate
trnK-UUU gene − 1689 4267 2579 Locate
matK gene − 2001 3530 1530 Locate
rps16 gene − 4818 5924 1107 Locate
trnQ-UUG gene − 6483 6554 72 Locate
psbK gene + 6949 7134 186 Locate
psbI gene + 7532 7642 111 Locate
trnS-GCU gene − 7797 7884 88 Locate
trnG-UCC gene + 8572 9325 754 Locate
trnR-UCU gene + 9506 9577 72 Locate
atpA gene − 9685 11208 1524 Locate
atpF gene − 11310 12552 1243 Locate
atpH gene − 12825 13070 246 Locate
atpI gene − 14100 14843 744 Locate
rps2 gene − 15068 15778 711 Locate
rpoC2 gene − 15979 20166 4188 Locate
rpoC1 gene − 20332 23146 2815 Locate
rpoB gene − 23173 26385 3213 Locate
trnC-GCA gene + 27533 27603 71 Locate
petN gene + 27759 27848 90 Locate
psbM gene − 28845 28949 105 Locate
trnD-GUC gene − 29464 29537 74 Locate
trnY-GUA gene − 29648 29731 84 Locate
trnE-UUC gene − 29803 29875 73 Locate
trnT-GGU gene + 30434 30505 72 Locate
psbD gene + 31869 32930 1062 Locate
psbC gene + 32878 34299 1422 Locate
trnS-UGA gene − 34546 34638 93 Locate
psbZ gene + 34961 35149 189 Locate
trnG-GCC gene + 35427 35497 71 Locate
trnM-CAU gene − 35655 35728 74 Locate
rps14 gene − 35873 36175 303 Locate
psaB gene − 36298 38502 2205 Locate
psaA gene − 38528 40780 2253 Locate
ycf3 gene − 41556 43500 1945 Locate
trnS-GGA gene + 44325 44411 87 Locate
rps4 gene − 44695 45300 606 Locate
trnT-UGU gene − 45661 45733 73 Locate
trnL-UAA gene + 46407 46991 585 Locate
trnF-GAA gene + 47294 47366 73 Locate
ndhJ gene − 47906 48382 477 Locate
ndhK gene − 48493 49170 678 Locate
ndhC gene − 49222 49584 363 Locate
trnV-UAC gene − 50530 51170 641 Locate
trnM-CAU gene + 51351 51423 73 Locate
atpE gene − 51628 52029 402 Locate
atpB gene − 52026 53522 1497 Locate
rbcL gene + 54330 55763 1434 Locate
accD gene + 56463 57944 1482 Locate
psaI gene + 58409 58519 111 Locate
ycf4 gene + 58965 59519 555 Locate
cemA gene + 60173 60862 690 Locate
petA gene + 61088 62050 963 Locate
psbJ gene − 63094 63216 123 Locate
psbL gene − 63351 63467 117 Locate
psbF gene − 63491 63610 120 Locate
psbE gene − 63625 63876 252 Locate
petL gene + 64694 64789 96 Locate
petG gene + 64968 65081 114 Locate
trnW-CCA gene − 65196 65269 74 Locate
trnP-UGG gene − 65444 65517 74 Locate
psaJ gene + 65802 65936 135 Locate
rpl33 gene + 66376 66576 201 Locate
rps18 gene + 66754 67059 306 Locate
rpl20 gene − 67293 67679 387 Locate
rps12 gene − 68478 68591 114 Locate
clpP gene − 68715 70625 1911 Locate
psbB gene + 71081 72607 1527 Locate
psbT gene + 72788 72889 102 Locate
psbN gene − 72955 73086 132 Locate
psbH gene + 73192 73413 222 Locate
petB gene + 73539 74915 1377 Locate
petD gene + 75103 76293 1191 Locate
rpoA gene − 76470 77477 1008 Locate
rps11 gene − 77547 77963 417 Locate
rpl36 gene − 78074 78187 114 Locate
infA gene − 78287 78520 234 Locate
rps8 gene − 78640 79044 405 Locate
rpl14 gene − 79229 79597 369 Locate
rpl16 gene − 79729 80998 1270 Locate
rps3 gene − 81151 81813 663 Locate
rpl22 gene − 81798 82265 468 Locate
rps19 gene − 82335 82613 279 Locate
rpl2 gene − 82673 84158 1486 Locate
rpl23 gene − 84177 84458 282 Locate
trnI-CAU gene − 84624 84697 74 Locate
ycf2 gene + 84786 91643 6858 Locate
ycf15 gene + 91785 91982 198 Locate
trnL-CAA gene − 92243 92323 81 Locate
ndhB gene − 92884 95031 2148 Locate
rps7 gene − 95360 95827 468 Locate
rps12 gene − 95881 96674 794 Locate
trnV-GAC gene + 98307 98378 72 Locate
rrn16S gene + 98605 100095 1491 Locate
trnI-GAU gene + 100394 101412 1019 Locate
trnA-UGC gene + 101477 102353 877 Locate
rrn23S gene + 102513 105323 2811 Locate
rrn4.5S gene + 105422 105524 103 Locate
rrn5S gene + 105780 105900 121 Locate
trnR-ACG gene + 106144 106217 74 Locate
trnN-GUU gene − 106720 106791 72 Locate
ndhF gene − 108139 110370 2232 Locate
rpl32 gene + 110806 110976 171 Locate
trnL-UAG gene + 111713 111792 80 Locate
ccsA gene + 111889 112866 978 Locate
ndhD gene − 113078 114619 1542 Locate
psaC gene − 114720 114965 246 Locate
ndhE gene − 115216 115521 306 Locate
ndhG gene − 115734 116264 531 Locate
ndhI gene − 116643 117149 507 Locate
ndhA gene − 117225 119327 2103 Locate
ndhH gene − 119329 120510 1182 Locate
rps15 gene − 120610 120882 273 Locate
ycf1 gene − 121300 126834 5535 Locate
trnN-GUU gene + 127164 127235 72 Locate
trnR-ACG gene − 127738 127811 74 Locate
rrn5S gene − 128055 128175 121 Locate
rrn4.5S gene − 128431 128533 103 Locate
rrn23S gene − 128632 131442 2811 Locate
trnA-UGC gene − 131602 132478 877 Locate
trnI-GAU gene − 132543 133561 1019 Locate
rrn16S gene − 133860 135350 1491 Locate
trnV-GAC gene − 135577 135648 72 Locate
rps12 gene + 137281 138074 794 Locate
rps7 gene + 138128 138595 468 Locate
ndhB gene + 138924 141071 2148 Locate
trnL-CAA gene + 141632 141712 81 Locate
ycf15 gene − 141973 142170 198 Locate
ycf2 gene − 142312 149169 6858 Locate
trnI-CAU gene + 149258 149331 74 Locate
rpl23 gene + 149497 149778 282 Locate
rpl2 gene + 149797 151282 1486 Locate
Status Available
Accession PX971245.1
Length 151,384 bp
GC content 38.1%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources