Salvia eremostachya chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870858.1 · 4–77 bp · −
psbA · PV870858.1 · 397–1,455 bp · −
matK · PV870858.1 · 1,994–3,523 bp · −
rps16 · PV870858.1 · 4,811–5,917 bp · −
trnQ-UUG · PV870858.1 · 6,878–6,949 bp · −
trnS-GCU · PV870858.1 · 8,196–8,283 bp · −
atpA · PV870858.1 · 10,084–11,607 bp · −
atpF · PV870858.1 · 11,709–12,951 bp · −
atpH · PV870858.1 · 13,224–13,469 bp · −
atpI · PV870858.1 · 14,499–15,242 bp · −
rps2 · PV870858.1 · 15,467–16,177 bp · −
rpoC2 · PV870858.1 · 16,379–20,566 bp · −
rpoC1 · PV870858.1 · 20,732–23,546 bp · −
rpoB · PV870858.1 · 23,573–26,785 bp · −
psbM · PV870858.1 · 29,245–29,349 bp · −
trnD-GUC · PV870858.1 · 29,864–29,937 bp · −
trnY-GUA · PV870858.1 · 30,048–30,131 bp · −
trnE-UUC · PV870858.1 · 30,203–30,275 bp · −
trnS-UGA · PV870858.1 · 34,946–35,038 bp · −
trnfM-CAU · PV870858.1 · 36,055–36,128 bp · −
rps14 · PV870858.1 · 36,273–36,575 bp · −
psaB · PV870858.1 · 36,698–38,902 bp · −
psaA · PV870858.1 · 38,928–41,180 bp · −
ycf3 · PV870858.1 · 41,956–43,900 bp · −
rps4 · PV870858.1 · 45,095–45,700 bp · −
trnT-UGU · PV870858.1 · 46,061–46,133 bp · −
ndhJ · PV870858.1 · 48,309–48,785 bp · −
ndhK · PV870858.1 · 48,896–49,573 bp · −
ndhC · PV870858.1 · 49,625–49,987 bp · −
trnV-UAC · PV870858.1 · 50,933–51,573 bp · −
atpE · PV870858.1 · 52,031–52,432 bp · −
atpB · PV870858.1 · 52,429–53,925 bp · −
psbJ · PV870858.1 · 63,493–63,615 bp · −
psbL · PV870858.1 · 63,750–63,866 bp · −
psbF · PV870858.1 · 63,890–64,009 bp · −
psbE · PV870858.1 · 64,024–64,275 bp · −
trnW-CCA · PV870858.1 · 65,595–65,668 bp · −
trnP-UGG · PV870858.1 · 65,843–65,916 bp · −
rpl20 · PV870858.1 · 67,691–68,077 bp · −
rps12 · PV870858.1 · 68,876–68,989 bp · −
rps12 · PV870858.1 · 96,259–97,052 bp · −
clpP · PV870858.1 · 69,113–71,024 bp · −
psbN · PV870858.1 · 73,335–73,466 bp · −
rpoA · PV870858.1 · 76,850–77,857 bp · −
rps11 · PV870858.1 · 77,927–78,343 bp · −
rpl36 · PV870858.1 · 78,454–78,567 bp · −
infA · PV870858.1 · 78,667–78,900 bp · −
rps8 · PV870858.1 · 79,020–79,424 bp · −
rpl14 · PV870858.1 · 79,607–79,975 bp · −
rpl16 · PV870858.1 · 80,107–81,376 bp · −
rps3 · PV870858.1 · 81,529–82,191 bp · −
rpl22 · PV870858.1 · 82,176–82,643 bp · −
rps19 · PV870858.1 · 82,713–82,991 bp · −
rpl2 · PV870858.1 · 83,051–84,536 bp · −
rpl23 · PV870858.1 · 84,555–84,836 bp · −
trnI-CAU · PV870858.1 · 85,002–85,075 bp · −
trnL-CAA · PV870858.1 · 92,621–92,701 bp · −
ndhB · PV870858.1 · 93,262–95,409 bp · −
rps7 · PV870858.1 · 95,738–96,205 bp · −
trnN-GUU · PV870858.1 · 107,098–107,169 bp · −
ndhF · PV870858.1 · 108,517–110,748 bp · −
ndhD · PV870858.1 · 113,470–115,011 bp · −
psaC · PV870858.1 · 115,111–115,356 bp · −
ndhE · PV870858.1 · 115,607–115,912 bp · −
ndhG · PV870858.1 · 116,125–116,655 bp · −
ndhI · PV870858.1 · 117,035–117,541 bp · −
ndhA · PV870858.1 · 117,617–119,719 bp · −
ndhH · PV870858.1 · 119,721–120,902 bp · −
rps15 · PV870858.1 · 121,002–121,274 bp · −
ycf1 · PV870858.1 · 121,692–127,226 bp · −
trnR-ACG · PV870858.1 · 128,130–128,203 bp · −
rrn5S · PV870858.1 · 128,447–128,567 bp · −
rrn4.5S · PV870858.1 · 128,823–128,925 bp · −
rrn23S · PV870858.1 · 129,024–131,834 bp · −
trnA-UGC · PV870858.1 · 131,994–132,870 bp · −
trnI-GAU · PV870858.1 · 132,935–133,953 bp · −
rrn16S · PV870858.1 · 134,252–135,742 bp · −
trnV-GAC · PV870858.1 · 135,969–136,040 bp · −
ycf15 · PV870858.1 · 142,365–142,562 bp · −
ycf2 · PV870858.1 · 142,704–149,561 bp · −
psbK · PV870858.1 · 7,344–7,529 bp · +
psbI · PV870858.1 · 7,927–8,037 bp · +
trnG-UCC · PV870858.1 · 8,971–9,724 bp · +
trnR-UCU · PV870858.1 · 9,905–9,976 bp · +
trnC-GCA · PV870858.1 · 27,933–28,003 bp · +
petN · PV870858.1 · 28,159–28,248 bp · +
trnT-GGU · PV870858.1 · 30,834–30,905 bp · +
psbD · PV870858.1 · 32,269–33,330 bp · +
psbC · PV870858.1 · 33,278–34,699 bp · +
psbZ · PV870858.1 · 35,361–35,549 bp · +
trnG-GCC · PV870858.1 · 35,827–35,897 bp · +
trnS-GGA · PV870858.1 · 44,725–44,811 bp · +
trnL-UAA · PV870858.1 · 46,811–47,395 bp · +
trnF-GAA · PV870858.1 · 47,698–47,770 bp · +
trnM-CAU · PV870858.1 · 51,754–51,826 bp · +
rbcL · PV870858.1 · 54,733–56,166 bp · +
accD · PV870858.1 · 56,866–58,347 bp · +
psaI · PV870858.1 · 58,812–58,922 bp · +
ycf4 · PV870858.1 · 59,368–59,922 bp · +
cemA · PV870858.1 · 60,572–61,261 bp · +
petA · PV870858.1 · 61,487–62,449 bp · +
petL · PV870858.1 · 65,093–65,188 bp · +
petG · PV870858.1 · 65,367–65,480 bp · +
psaJ · PV870858.1 · 66,201–66,335 bp · +
rpl33 · PV870858.1 · 66,775–66,975 bp · +
rps18 · PV870858.1 · 67,153–67,458 bp · +
rps12 · PV870858.1 · 137,673–138,466 bp · +
psbB · PV870858.1 · 71,461–72,987 bp · +
psbT · PV870858.1 · 73,168–73,269 bp · +
psbH · PV870858.1 · 73,572–73,793 bp · +
petB · PV870858.1 · 73,919–75,295 bp · +
petD · PV870858.1 · 75,483–76,673 bp · +
ycf2 · PV870858.1 · 85,164–92,021 bp · +
ycf15 · PV870858.1 · 92,163–92,360 bp · +
trnV-GAC · PV870858.1 · 98,685–98,756 bp · +
rrn16S · PV870858.1 · 98,983–100,473 bp · +
trnI-GAU · PV870858.1 · 100,772–101,790 bp · +
trnA-UGC · PV870858.1 · 101,855–102,731 bp · +
rrn23S · PV870858.1 · 102,891–105,701 bp · +
rrn4.5S · PV870858.1 · 105,800–105,902 bp · +
rrn5S · PV870858.1 · 106,158–106,278 bp · +
trnR-ACG · PV870858.1 · 106,522–106,595 bp · +
rpl32 · PV870858.1 · 111,191–111,361 bp · +
trnL-UAG · PV870858.1 · 112,098–112,177 bp · +
ccsA · PV870858.1 · 112,274–113,251 bp · +
trnN-GUU · PV870858.1 · 127,556–127,627 bp · +
rps7 · PV870858.1 · 138,520–138,987 bp · +
ndhB · PV870858.1 · 139,316–141,463 bp · +
trnL-CAA · PV870858.1 · 142,024–142,104 bp · +
trnI-CAU · PV870858.1 · 149,650–149,723 bp · +
rpl23 · PV870858.1 · 149,889–150,170 bp · +
rpl2 · PV870858.1 · 150,189–151,674 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia eremostachya
ANNOTATED PLASTOME
PV870858.1
151,720 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37930 75860 113790 151720 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 397 1455 1059 Locate
matK gene − 1994 3523 1530 Locate
rps16 gene − 4811 5917 1107 Locate
trnQ-UUG gene − 6878 6949 72 Locate
psbK gene + 7344 7529 186 Locate
psbI gene + 7927 8037 111 Locate
trnS-GCU gene − 8196 8283 88 Locate
trnG-UCC gene + 8971 9724 754 Locate
trnR-UCU gene + 9905 9976 72 Locate
atpA gene − 10084 11607 1524 Locate
atpF gene − 11709 12951 1243 Locate
atpH gene − 13224 13469 246 Locate
atpI gene − 14499 15242 744 Locate
rps2 gene − 15467 16177 711 Locate
rpoC2 gene − 16379 20566 4188 Locate
rpoC1 gene − 20732 23546 2815 Locate
rpoB gene − 23573 26785 3213 Locate
trnC-GCA gene + 27933 28003 71 Locate
petN gene + 28159 28248 90 Locate
psbM gene − 29245 29349 105 Locate
trnD-GUC gene − 29864 29937 74 Locate
trnY-GUA gene − 30048 30131 84 Locate
trnE-UUC gene − 30203 30275 73 Locate
trnT-GGU gene + 30834 30905 72 Locate
psbD gene + 32269 33330 1062 Locate
psbC gene + 33278 34699 1422 Locate
trnS-UGA gene − 34946 35038 93 Locate
psbZ gene + 35361 35549 189 Locate
trnG-GCC gene + 35827 35897 71 Locate
trnfM-CAU gene − 36055 36128 74 Locate
rps14 gene − 36273 36575 303 Locate
psaB gene − 36698 38902 2205 Locate
psaA gene − 38928 41180 2253 Locate
ycf3 gene − 41956 43900 1945 Locate
trnS-GGA gene + 44725 44811 87 Locate
rps4 gene − 45095 45700 606 Locate
trnT-UGU gene − 46061 46133 73 Locate
trnL-UAA gene + 46811 47395 585 Locate
trnF-GAA gene + 47698 47770 73 Locate
ndhJ gene − 48309 48785 477 Locate
ndhK gene − 48896 49573 678 Locate
ndhC gene − 49625 49987 363 Locate
trnV-UAC gene − 50933 51573 641 Locate
trnM-CAU gene + 51754 51826 73 Locate
atpE gene − 52031 52432 402 Locate
atpB gene − 52429 53925 1497 Locate
rbcL gene + 54733 56166 1434 Locate
accD gene + 56866 58347 1482 Locate
psaI gene + 58812 58922 111 Locate
ycf4 gene + 59368 59922 555 Locate
cemA gene + 60572 61261 690 Locate
petA gene + 61487 62449 963 Locate
psbJ gene − 63493 63615 123 Locate
psbL gene − 63750 63866 117 Locate
psbF gene − 63890 64009 120 Locate
psbE gene − 64024 64275 252 Locate
petL gene + 65093 65188 96 Locate
petG gene + 65367 65480 114 Locate
trnW-CCA gene − 65595 65668 74 Locate
trnP-UGG gene − 65843 65916 74 Locate
psaJ gene + 66201 66335 135 Locate
rpl33 gene + 66775 66975 201 Locate
rps18 gene + 67153 67458 306 Locate
rpl20 gene − 67691 68077 387 Locate
rps12 gene − 68876 68989 114 Locate
clpP gene − 69113 71024 1912 Locate
psbB gene + 71461 72987 1527 Locate
psbT gene + 73168 73269 102 Locate
psbN gene − 73335 73466 132 Locate
psbH gene + 73572 73793 222 Locate
petB gene + 73919 75295 1377 Locate
petD gene + 75483 76673 1191 Locate
rpoA gene − 76850 77857 1008 Locate
rps11 gene − 77927 78343 417 Locate
rpl36 gene − 78454 78567 114 Locate
infA gene − 78667 78900 234 Locate
rps8 gene − 79020 79424 405 Locate
rpl14 gene − 79607 79975 369 Locate
rpl16 gene − 80107 81376 1270 Locate
rps3 gene − 81529 82191 663 Locate
rpl22 gene − 82176 82643 468 Locate
rps19 gene − 82713 82991 279 Locate
rpl2 gene − 83051 84536 1486 Locate
rpl23 gene − 84555 84836 282 Locate
trnI-CAU gene − 85002 85075 74 Locate
ycf2 gene + 85164 92021 6858 Locate
ycf15 gene + 92163 92360 198 Locate
trnL-CAA gene − 92621 92701 81 Locate
ndhB gene − 93262 95409 2148 Locate
rps7 gene − 95738 96205 468 Locate
rps12 gene − 96259 97052 794 Locate
trnV-GAC gene + 98685 98756 72 Locate
rrn16S gene + 98983 100473 1491 Locate
trnI-GAU gene + 100772 101790 1019 Locate
trnA-UGC gene + 101855 102731 877 Locate
rrn23S gene + 102891 105701 2811 Locate
rrn4.5S gene + 105800 105902 103 Locate
rrn5S gene + 106158 106278 121 Locate
trnR-ACG gene + 106522 106595 74 Locate
trnN-GUU gene − 107098 107169 72 Locate
ndhF gene − 108517 110748 2232 Locate
rpl32 gene + 111191 111361 171 Locate
trnL-UAG gene + 112098 112177 80 Locate
ccsA gene + 112274 113251 978 Locate
ndhD gene − 113470 115011 1542 Locate
psaC gene − 115111 115356 246 Locate
ndhE gene − 115607 115912 306 Locate
ndhG gene − 116125 116655 531 Locate
ndhI gene − 117035 117541 507 Locate
ndhA gene − 117617 119719 2103 Locate
ndhH gene − 119721 120902 1182 Locate
rps15 gene − 121002 121274 273 Locate
ycf1 gene − 121692 127226 5535 Locate
trnN-GUU gene + 127556 127627 72 Locate
trnR-ACG gene − 128130 128203 74 Locate
rrn5S gene − 128447 128567 121 Locate
rrn4.5S gene − 128823 128925 103 Locate
rrn23S gene − 129024 131834 2811 Locate
trnA-UGC gene − 131994 132870 877 Locate
trnI-GAU gene − 132935 133953 1019 Locate
rrn16S gene − 134252 135742 1491 Locate
trnV-GAC gene − 135969 136040 72 Locate
rps12 gene + 137673 138466 794 Locate
rps7 gene + 138520 138987 468 Locate
ndhB gene + 139316 141463 2148 Locate
trnL-CAA gene + 142024 142104 81 Locate
ycf15 gene − 142365 142562 198 Locate
ycf2 gene − 142704 149561 6858 Locate
trnI-CAU gene + 149650 149723 74 Locate
rpl23 gene + 149889 150170 282 Locate
rpl2 gene + 150189 151674 1486 Locate
Status Available
Accession PV870858.1
Length 151,720 bp
GC content 38.1%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources