Salvia fruticosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870859.1 · 11–84 bp · −
psbA · PV870859.1 · 414–1,472 bp · −
trnK-UUU · PV870859.1 · 1,704–4,298 bp · −
matK · PV870859.1 · 2,024–3,559 bp · −
rps16 · PV870859.1 · 4,864–5,973 bp · −
trnQ-UUG · PV870859.1 · 6,527–6,598 bp · −
trnS-GCU · PV870859.1 · 7,845–7,932 bp · −
atpA · PV870859.1 · 9,741–11,264 bp · −
atpF · PV870859.1 · 11,360–12,616 bp · −
atpH · PV870859.1 · 12,896–13,141 bp · −
atpI · PV870859.1 · 14,176–14,919 bp · −
rps2 · PV870859.1 · 15,143–15,853 bp · −
rpoC2 · PV870859.1 · 16,063–20,244 bp · −
rpoC1 · PV870859.1 · 20,409–23,225 bp · −
rpoB · PV870859.1 · 23,252–26,464 bp · −
psbM · PV870859.1 · 28,868–28,972 bp · −
trnD-GUC · PV870859.1 · 29,498–29,571 bp · −
trnY-GUA · PV870859.1 · 29,682–29,765 bp · −
trnE-UUC · PV870859.1 · 29,836–29,908 bp · −
trnS-UGA · PV870859.1 · 34,554–34,645 bp · −
trnfM-CAU · PV870859.1 · 35,701–35,774 bp · −
rps14 · PV870859.1 · 35,933–36,235 bp · −
psaB · PV870859.1 · 36,358–38,562 bp · −
psaA · PV870859.1 · 38,588–40,840 bp · −
ycf3 · PV870859.1 · 41,625–43,574 bp · −
rps4 · PV870859.1 · 44,478–45,083 bp · −
trnT-UGU · PV870859.1 · 45,425–45,497 bp · −
ndhJ · PV870859.1 · 47,775–48,251 bp · −
ndhK · PV870859.1 · 48,362–49,039 bp · −
ndhC · PV870859.1 · 49,091–49,453 bp · −
trnV-UAC · PV870859.1 · 50,404–51,051 bp · −
atpE · PV870859.1 · 51,515–51,916 bp · −
atpB · PV870859.1 · 51,913–53,409 bp · −
psbJ · PV870859.1 · 62,877–62,999 bp · −
psbL · PV870859.1 · 63,129–63,245 bp · −
psbF · PV870859.1 · 63,269–63,388 bp · −
psbE · PV870859.1 · 63,403–63,654 bp · −
trnW-CCA · PV870859.1 · 65,047–65,120 bp · −
trnP-UGG · PV870859.1 · 65,295–65,368 bp · −
rpl20 · PV870859.1 · 67,134–67,520 bp · −
rps12 · PV870859.1 · 68,316–68,429 bp · −
rps12 · PV870859.1 · 95,682–96,475 bp · −
clpP · PV870859.1 · 68,552–70,463 bp · −
psbN · PV870859.1 · 72,795–72,926 bp · −
rpoA · PV870859.1 · 76,320–77,327 bp · −
rps11 · PV870859.1 · 77,398–77,814 bp · −
rpl36 · PV870859.1 · 77,924–78,037 bp · −
infA · PV870859.1 · 78,133–78,366 bp · −
rps8 · PV870859.1 · 78,487–78,891 bp · −
rpl14 · PV870859.1 · 79,076–79,444 bp · −
rpl16 · PV870859.1 · 79,574–80,841 bp · −
rps3 · PV870859.1 · 80,984–81,646 bp · −
rpl22 · PV870859.1 · 81,631–82,098 bp · −
rps19 · PV870859.1 · 82,168–82,446 bp · −
rpl2 · PV870859.1 · 82,506–83,993 bp · −
rpl23 · PV870859.1 · 84,012–84,293 bp · −
trnI-CAU · PV870859.1 · 84,459–84,532 bp · −
trnL-CAA · PV870859.1 · 92,045–92,125 bp · −
ndhB · PV870859.1 · 92,679–94,886 bp · −
rps7 · PV870859.1 · 95,161–95,628 bp · −
trnN-GUU · PV870859.1 · 106,538–106,609 bp · −
ndhF · PV870859.1 · 107,963–110,194 bp · −
ndhD · PV870859.1 · 112,895–114,436 bp · −
psaC · PV870859.1 · 114,528–114,773 bp · −
ndhE · PV870859.1 · 115,024–115,329 bp · −
ndhG · PV870859.1 · 115,509–116,039 bp · −
ndhI · PV870859.1 · 116,413–116,919 bp · −
ndhA · PV870859.1 · 117,000–119,098 bp · −
ndhH · PV870859.1 · 119,100–120,281 bp · −
rps15 · PV870859.1 · 120,381–120,653 bp · −
ycf1 · PV870859.1 · 121,039–126,570 bp · −
trnR-ACG · PV870859.1 · 127,496–127,569 bp · −
rrn5S · PV870859.1 · 127,813–127,933 bp · −
rrn4.5S · PV870859.1 · 128,183–128,285 bp · −
rrn23S · PV870859.1 · 128,384–131,194 bp · −
trnA-UGC · PV870859.1 · 131,370–132,247 bp · −
trnI-GAU · PV870859.1 · 132,312–133,331 bp · −
rrn16S · PV870859.1 · 133,630–135,120 bp · −
trnV-GAC · PV870859.1 · 135,347–135,418 bp · −
ycf15 · PV870859.1 · 141,725–141,922 bp · −
ycf2 · PV870859.1 · 142,064–148,888 bp · −
psbK · PV870859.1 · 6,985–7,164 bp · +
psbI · PV870859.1 · 7,563–7,673 bp · +
trnG-UCC · PV870859.1 · 8,629–9,383 bp · +
trnR-UCU · PV870859.1 · 9,563–9,634 bp · +
trnC-GCA · PV870859.1 · 27,604–27,674 bp · +
petN · PV870859.1 · 27,838–27,927 bp · +
trnT-GGU · PV870859.1 · 30,456–30,527 bp · +
psbD · PV870859.1 · 31,878–32,939 bp · +
psbC · PV870859.1 · 32,887–34,308 bp · +
psbZ · PV870859.1 · 34,991–35,179 bp · +
trnG-GCC · PV870859.1 · 35,457–35,527 bp · +
trnS-GGA · PV870859.1 · 44,134–44,220 bp · +
trnL-UAA · PV870859.1 · 46,178–46,750 bp · +
trnF-GAA · PV870859.1 · 47,034–47,106 bp · +
trnM-CAU · PV870859.1 · 51,232–51,304 bp · +
rbcL · PV870859.1 · 54,201–55,646 bp · +
accD · PV870859.1 · 56,321–57,802 bp · +
psaI · PV870859.1 · 58,269–58,379 bp · +
ycf4 · PV870859.1 · 58,812–59,366 bp · +
cemA · PV870859.1 · 60,029–60,718 bp · +
petA · PV870859.1 · 60,926–61,888 bp · +
petL · PV870859.1 · 64,543–64,638 bp · +
petG · PV870859.1 · 64,818–64,931 bp · +
psaJ · PV870859.1 · 65,645–65,779 bp · +
rpl33 · PV870859.1 · 66,224–66,424 bp · +
rps18 · PV870859.1 · 66,595–66,900 bp · +
rps12 · PV870859.1 · 137,034–137,827 bp · +
psbB · PV870859.1 · 70,917–72,443 bp · +
psbT · PV870859.1 · 72,627–72,734 bp · +
psbH · PV870859.1 · 73,032–73,253 bp · +
petB · PV870859.1 · 73,379–74,765 bp · +
petD · PV870859.1 · 74,949–76,143 bp · +
ycf2 · PV870859.1 · 84,621–91,445 bp · +
ycf15 · PV870859.1 · 91,587–91,784 bp · +
trnV-GAC · PV870859.1 · 98,091–98,162 bp · +
rrn16S · PV870859.1 · 98,389–99,879 bp · +
trnI-GAU · PV870859.1 · 100,178–101,197 bp · +
trnA-UGC · PV870859.1 · 101,262–102,139 bp · +
rrn23S · PV870859.1 · 102,315–105,125 bp · +
rrn4.5S · PV870859.1 · 105,224–105,326 bp · +
rrn5S · PV870859.1 · 105,576–105,696 bp · +
trnR-ACG · PV870859.1 · 105,940–106,013 bp · +
rpl32 · PV870859.1 · 110,641–110,802 bp · +
trnL-UAG · PV870859.1 · 111,514–111,593 bp · +
ccsA · PV870859.1 · 111,690–112,661 bp · +
trnN-GUU · PV870859.1 · 126,900–126,971 bp · +
rps7 · PV870859.1 · 137,881–138,348 bp · +
ndhB · PV870859.1 · 138,623–140,830 bp · +
trnL-CAA · PV870859.1 · 141,384–141,464 bp · +
trnI-CAU · PV870859.1 · 148,977–149,050 bp · +
rpl23 · PV870859.1 · 149,216–149,497 bp · +
rpl2 · PV870859.1 · 149,516–151,003 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia fruticosa
ANNOTATED PLASTOME
PV870859.1
151,105 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37776 75552 113329 151105 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 414 1472 1059 Locate
trnK-UUU gene − 1704 4298 2595 Locate
matK gene − 2024 3559 1536 Locate
rps16 gene − 4864 5973 1110 Locate
trnQ-UUG gene − 6527 6598 72 Locate
psbK gene + 6985 7164 180 Locate
psbI gene + 7563 7673 111 Locate
trnS-GCU gene − 7845 7932 88 Locate
trnG-UCC gene + 8629 9383 755 Locate
trnR-UCU gene + 9563 9634 72 Locate
atpA gene − 9741 11264 1524 Locate
atpF gene − 11360 12616 1257 Locate
atpH gene − 12896 13141 246 Locate
atpI gene − 14176 14919 744 Locate
rps2 gene − 15143 15853 711 Locate
rpoC2 gene − 16063 20244 4182 Locate
rpoC1 gene − 20409 23225 2817 Locate
rpoB gene − 23252 26464 3213 Locate
trnC-GCA gene + 27604 27674 71 Locate
petN gene + 27838 27927 90 Locate
psbM gene − 28868 28972 105 Locate
trnD-GUC gene − 29498 29571 74 Locate
trnY-GUA gene − 29682 29765 84 Locate
trnE-UUC gene − 29836 29908 73 Locate
trnT-GGU gene + 30456 30527 72 Locate
psbD gene + 31878 32939 1062 Locate
psbC gene + 32887 34308 1422 Locate
trnS-UGA gene − 34554 34645 92 Locate
psbZ gene + 34991 35179 189 Locate
trnG-GCC gene + 35457 35527 71 Locate
trnfM-CAU gene − 35701 35774 74 Locate
rps14 gene − 35933 36235 303 Locate
psaB gene − 36358 38562 2205 Locate
psaA gene − 38588 40840 2253 Locate
ycf3 gene − 41625 43574 1950 Locate
trnS-GGA gene + 44134 44220 87 Locate
rps4 gene − 44478 45083 606 Locate
trnT-UGU gene − 45425 45497 73 Locate
trnL-UAA gene + 46178 46750 573 Locate
trnF-GAA gene + 47034 47106 73 Locate
ndhJ gene − 47775 48251 477 Locate
ndhK gene − 48362 49039 678 Locate
ndhC gene − 49091 49453 363 Locate
trnV-UAC gene − 50404 51051 648 Locate
trnM-CAU gene + 51232 51304 73 Locate
atpE gene − 51515 51916 402 Locate
atpB gene − 51913 53409 1497 Locate
rbcL gene + 54201 55646 1446 Locate
accD gene + 56321 57802 1482 Locate
psaI gene + 58269 58379 111 Locate
ycf4 gene + 58812 59366 555 Locate
cemA gene + 60029 60718 690 Locate
petA gene + 60926 61888 963 Locate
psbJ gene − 62877 62999 123 Locate
psbL gene − 63129 63245 117 Locate
psbF gene − 63269 63388 120 Locate
psbE gene − 63403 63654 252 Locate
petL gene + 64543 64638 96 Locate
petG gene + 64818 64931 114 Locate
trnW-CCA gene − 65047 65120 74 Locate
trnP-UGG gene − 65295 65368 74 Locate
psaJ gene + 65645 65779 135 Locate
rpl33 gene + 66224 66424 201 Locate
rps18 gene + 66595 66900 306 Locate
rpl20 gene − 67134 67520 387 Locate
rps12 gene − 68316 68429 114 Locate
clpP gene − 68552 70463 1912 Locate
psbB gene + 70917 72443 1527 Locate
psbT gene + 72627 72734 108 Locate
psbN gene − 72795 72926 132 Locate
psbH gene + 73032 73253 222 Locate
petB gene + 73379 74765 1387 Locate
petD gene + 74949 76143 1195 Locate
rpoA gene − 76320 77327 1008 Locate
rps11 gene − 77398 77814 417 Locate
rpl36 gene − 77924 78037 114 Locate
infA gene − 78133 78366 234 Locate
rps8 gene − 78487 78891 405 Locate
rpl14 gene − 79076 79444 369 Locate
rpl16 gene − 79574 80841 1268 Locate
rps3 gene − 80984 81646 663 Locate
rpl22 gene − 81631 82098 468 Locate
rps19 gene − 82168 82446 279 Locate
rpl2 gene − 82506 83993 1488 Locate
rpl23 gene − 84012 84293 282 Locate
trnI-CAU gene − 84459 84532 74 Locate
ycf2 gene + 84621 91445 6825 Locate
ycf15 gene + 91587 91784 198 Locate
trnL-CAA gene − 92045 92125 81 Locate
ndhB gene − 92679 94886 2208 Locate
rps7 gene − 95161 95628 468 Locate
rps12 gene − 95682 96475 794 Locate
trnV-GAC gene + 98091 98162 72 Locate
rrn16S gene + 98389 99879 1491 Locate
trnI-GAU gene + 100178 101197 1020 Locate
trnA-UGC gene + 101262 102139 878 Locate
rrn23S gene + 102315 105125 2811 Locate
rrn4.5S gene + 105224 105326 103 Locate
rrn5S gene + 105576 105696 121 Locate
trnR-ACG gene + 105940 106013 74 Locate
trnN-GUU gene − 106538 106609 72 Locate
ndhF gene − 107963 110194 2232 Locate
rpl32 gene + 110641 110802 162 Locate
trnL-UAG gene + 111514 111593 80 Locate
ccsA gene + 111690 112661 972 Locate
ndhD gene − 112895 114436 1542 Locate
psaC gene − 114528 114773 246 Locate
ndhE gene − 115024 115329 306 Locate
ndhG gene − 115509 116039 531 Locate
ndhI gene − 116413 116919 507 Locate
ndhA gene − 117000 119098 2099 Locate
ndhH gene − 119100 120281 1182 Locate
rps15 gene − 120381 120653 273 Locate
ycf1 gene − 121039 126570 5532 Locate
trnN-GUU gene + 126900 126971 72 Locate
trnR-ACG gene − 127496 127569 74 Locate
rrn5S gene − 127813 127933 121 Locate
rrn4.5S gene − 128183 128285 103 Locate
rrn23S gene − 128384 131194 2811 Locate
trnA-UGC gene − 131370 132247 878 Locate
trnI-GAU gene − 132312 133331 1020 Locate
rrn16S gene − 133630 135120 1491 Locate
trnV-GAC gene − 135347 135418 72 Locate
rps12 gene + 137034 137827 794 Locate
rps7 gene + 137881 138348 468 Locate
ndhB gene + 138623 140830 2208 Locate
trnL-CAA gene + 141384 141464 81 Locate
ycf15 gene − 141725 141922 198 Locate
ycf2 gene − 142064 148888 6825 Locate
trnI-CAU gene + 148977 149050 74 Locate
rpl23 gene + 149216 149497 282 Locate
rpl2 gene + 149516 151003 1488 Locate
Status Available
Accession PV870859.1
Length 151,105 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources