Salvia insignis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV972776.1 · 11–85 bp · −
psbA · PV972776.1 · 388–1,446 bp · −
trnK-UUU · PV972776.1 · 1,678–4,267 bp · −
matK · PV972776.1 · 1,998–3,527 bp · −
rps16 · PV972776.1 · 4,827–5,922 bp · −
trnQ-UUG · PV972776.1 · 6,466–6,537 bp · −
trnS-GCU · PV972776.1 · 7,758–7,845 bp · −
atpA · PV972776.1 · 9,667–11,190 bp · −
atpF · PV972776.1 · 11,286–12,545 bp · −
atpH · PV972776.1 · 12,817–13,062 bp · −
atpI · PV972776.1 · 13,986–14,729 bp · −
rps2 · PV972776.1 · 14,954–15,664 bp · −
rpoC2 · PV972776.1 · 15,881–20,056 bp · −
rpoC1 · PV972776.1 · 20,233–23,043 bp · −
rpoB · PV972776.1 · 23,070–26,282 bp · −
psbM · PV972776.1 · 28,730–28,834 bp · −
trnD-GUC · PV972776.1 · 29,345–29,418 bp · −
trnY-GUA · PV972776.1 · 29,529–29,612 bp · −
trnE-UUC · PV972776.1 · 29,683–29,755 bp · −
trnS-UGA · PV972776.1 · 34,423–34,515 bp · −
trnfM-CAU · PV972776.1 · 35,556–35,629 bp · −
rps14 · PV972776.1 · 35,774–36,076 bp · −
psaB · PV972776.1 · 36,198–38,402 bp · −
psaA · PV972776.1 · 38,428–40,680 bp · −
pafI · PV972776.1 · 41,474–43,431 bp · −
rps4 · PV972776.1 · 44,638–45,243 bp · −
trnT-UGU · PV972776.1 · 45,599–45,671 bp · −
ndhJ · PV972776.1 · 47,930–48,424 bp · −
ndhK · PV972776.1 · 48,517–49,194 bp · −
ndhC · PV972776.1 · 49,246–49,608 bp · −
trnV-UAC · PV972776.1 · 50,581–51,229 bp · −
atpE · PV972776.1 · 51,688–52,089 bp · −
atpB · PV972776.1 · 52,086–53,582 bp · −
psbJ · PV972776.1 · 63,079–63,201 bp · −
psbL · PV972776.1 · 63,331–63,447 bp · −
psbF · PV972776.1 · 63,471–63,590 bp · −
psbE · PV972776.1 · 63,605–63,856 bp · −
trnW-CCA · PV972776.1 · 65,259–65,332 bp · −
trnP-UGG · PV972776.1 · 65,507–65,580 bp · −
rpl20 · PV972776.1 · 67,333–67,719 bp · −
rps12 · PV972776.1 · 68,512–68,625 bp · −
rps12 · PV972776.1 · 95,815–96,608 bp · −
clpP1 · PV972776.1 · 68,748–70,650 bp · −
psbN · PV972776.1 · 72,952–73,083 bp · −
rpoA · PV972776.1 · 76,463–77,470 bp · −
rps11 · PV972776.1 · 77,541–77,957 bp · −
rpl36 · PV972776.1 · 78,067–78,180 bp · −
infA · PV972776.1 · 78,276–78,509 bp · −
rps8 · PV972776.1 · 78,630–79,034 bp · −
rpl14 · PV972776.1 · 79,205–79,573 bp · −
rpl16 · PV972776.1 · 79,703–80,972 bp · −
rps3 · PV972776.1 · 81,115–81,777 bp · −
rpl22 · PV972776.1 · 81,762–82,229 bp · −
rps19 · PV972776.1 · 82,293–82,571 bp · −
rpl2 · PV972776.1 · 82,638–84,125 bp · −
rpl23 · PV972776.1 · 84,144–84,425 bp · −
trnI-CAU · PV972776.1 · 84,591–84,664 bp · −
trnL-CAA · PV972776.1 · 92,181–92,261 bp · −
ndhB · PV972776.1 · 92,812–95,019 bp · −
rps7 · PV972776.1 · 95,294–95,761 bp · −
trnN-GUU · PV972776.1 · 106,644–106,715 bp · −
ndhF · PV972776.1 · 108,063–110,294 bp · −
ndhD · PV972776.1 · 113,026–114,540 bp · −
psaC · PV972776.1 · 114,662–114,907 bp · −
ndhE · PV972776.1 · 115,158–115,460 bp · −
ndhG · PV972776.1 · 115,693–116,223 bp · −
ndhI · PV972776.1 · 116,597–117,103 bp · −
ndhA · PV972776.1 · 117,184–119,306 bp · −
ndhH · PV972776.1 · 119,308–120,543 bp · −
rps15 · PV972776.1 · 120,589–120,861 bp · −
ycf1 · PV972776.1 · 121,251–126,881 bp · −
trnR-ACG · PV972776.1 · 127,690–127,763 bp · −
rrn5 · PV972776.1 · 128,007–128,127 bp · −
rrn4.5 · PV972776.1 · 128,377–128,479 bp · −
rrn23 · PV972776.1 · 128,580–131,390 bp · −
trnA-UGC · PV972776.1 · 131,551–132,428 bp · −
trnI-GAU · PV972776.1 · 132,493–133,512 bp · −
rrn16 · PV972776.1 · 133,811–135,301 bp · −
trnV-GAC · PV972776.1 · 135,528–135,599 bp · −
ycf15 · PV972776.1 · 141,890–142,153 bp · −
ycf2 · PV972776.1 · 142,229–149,062 bp · −
psbK · PV972776.1 · 6,923–7,102 bp · +
psbI · PV972776.1 · 7,508–7,618 bp · +
trnG-UCC · PV972776.1 · 8,555–9,309 bp · +
trnR-UCU · PV972776.1 · 9,490–9,561 bp · +
trnC-GCA · PV972776.1 · 27,418–27,488 bp · +
petN · PV972776.1 · 27,652–27,741 bp · +
trnT-GGU · PV972776.1 · 30,323–30,394 bp · +
psbD · PV972776.1 · 31,744–32,805 bp · +
psbC · PV972776.1 · 32,753–34,174 bp · +
psbZ · PV972776.1 · 34,770–35,033 bp · +
trnG-GCC · PV972776.1 · 35,309–35,379 bp · +
trnS-GGA · PV972776.1 · 44,284–44,370 bp · +
trnL-UAA · PV972776.1 · 46,363–46,926 bp · +
trnF-GAA · PV972776.1 · 47,210–47,282 bp · +
trnM-CAU · PV972776.1 · 51,410–51,482 bp · +
rbcL · PV972776.1 · 54,360–55,814 bp · +
accD · PV972776.1 · 56,514–57,986 bp · +
psaI · PV972776.1 · 58,454–58,564 bp · +
pafII · PV972776.1 · 59,013–59,567 bp · +
cemA · PV972776.1 · 60,211–60,900 bp · +
petA · PV972776.1 · 61,121–62,083 bp · +
petL · PV972776.1 · 64,755–64,850 bp · +
petG · PV972776.1 · 65,030–65,143 bp · +
psaJ · PV972776.1 · 65,850–65,984 bp · +
rpl33 · PV972776.1 · 66,422–66,622 bp · +
rps18 · PV972776.1 · 66,793–67,098 bp · +
rps12 · PV972776.1 · 137,207–138,000 bp · +
psbB · PV972776.1 · 71,104–72,630 bp · +
psbT · PV972776.1 · 72,784–72,891 bp · +
psbH · PV972776.1 · 73,171–73,410 bp · +
petB · PV972776.1 · 73,536–74,908 bp · +
petD · PV972776.1 · 75,096–76,286 bp · +
ycf2 · PV972776.1 · 84,753–91,586 bp · +
ycf15 · PV972776.1 · 91,662–91,925 bp · +
trnV-GAC · PV972776.1 · 98,216–98,287 bp · +
rrn16 · PV972776.1 · 98,514–100,004 bp · +
trnI-GAU · PV972776.1 · 100,303–101,322 bp · +
trnA-UGC · PV972776.1 · 101,387–102,264 bp · +
rrn23 · PV972776.1 · 102,425–105,235 bp · +
rrn4.5 · PV972776.1 · 105,336–105,438 bp · +
rrn5 · PV972776.1 · 105,688–105,808 bp · +
trnR-ACG · PV972776.1 · 106,052–106,125 bp · +
ycf1 · PV972776.1 · 107,045–108,196 bp · +
rpl32 · PV972776.1 · 110,725–110,922 bp · +
trnL-UAG · PV972776.1 · 111,649–111,728 bp · +
ccsA · PV972776.1 · 111,826–112,797 bp · +
trnN-GUU · PV972776.1 · 127,100–127,171 bp · +
rps7 · PV972776.1 · 138,054–138,521 bp · +
ndhB · PV972776.1 · 138,796–141,003 bp · +
trnL-CAA · PV972776.1 · 141,554–141,634 bp · +
trnI-CAU · PV972776.1 · 149,151–149,224 bp · +
rpl23 · PV972776.1 · 149,390–149,671 bp · +
rpl2 · PV972776.1 · 149,690–151,177 bp · +
rps19 · PV972776.1 · 151,244–151,286 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia insignis
ANNOTATED PLASTOME
PV972776.1
151,286 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37822 75643 113464 151286 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 388 1446 1059 Locate
trnK-UUU gene − 1678 4267 2590 Locate
matK gene − 1998 3527 1530 Locate
rps16 gene − 4827 5922 1096 Locate
trnQ-UUG gene − 6466 6537 72 Locate
psbK gene + 6923 7102 180 Locate
psbI gene + 7508 7618 111 Locate
trnS-GCU gene − 7758 7845 88 Locate
trnG-UCC gene + 8555 9309 755 Locate
trnR-UCU gene + 9490 9561 72 Locate
atpA gene − 9667 11190 1524 Locate
atpF gene − 11286 12545 1260 Locate
atpH gene − 12817 13062 246 Locate
atpI gene − 13986 14729 744 Locate
rps2 gene − 14954 15664 711 Locate
rpoC2 gene − 15881 20056 4176 Locate
rpoC1 gene − 20233 23043 2811 Locate
rpoB gene − 23070 26282 3213 Locate
trnC-GCA gene + 27418 27488 71 Locate
petN gene + 27652 27741 90 Locate
psbM gene − 28730 28834 105 Locate
trnD-GUC gene − 29345 29418 74 Locate
trnY-GUA gene − 29529 29612 84 Locate
trnE-UUC gene − 29683 29755 73 Locate
trnT-GGU gene + 30323 30394 72 Locate
psbD gene + 31744 32805 1062 Locate
psbC gene + 32753 34174 1422 Locate
trnS-UGA gene − 34423 34515 93 Locate
psbZ gene + 34770 35033 264 Locate
trnG-GCC gene + 35309 35379 71 Locate
trnfM-CAU gene − 35556 35629 74 Locate
rps14 gene − 35774 36076 303 Locate
psaB gene − 36198 38402 2205 Locate
psaA gene − 38428 40680 2253 Locate
pafI gene − 41474 43431 1958 Locate
trnS-GGA gene + 44284 44370 87 Locate
rps4 gene − 44638 45243 606 Locate
trnT-UGU gene − 45599 45671 73 Locate
trnL-UAA gene + 46363 46926 564 Locate
trnF-GAA gene + 47210 47282 73 Locate
ndhJ gene − 47930 48424 495 Locate
ndhK gene − 48517 49194 678 Locate
ndhC gene − 49246 49608 363 Locate
trnV-UAC gene − 50581 51229 649 Locate
trnM-CAU gene + 51410 51482 73 Locate
atpE gene − 51688 52089 402 Locate
atpB gene − 52086 53582 1497 Locate
rbcL gene + 54360 55814 1455 Locate
accD gene + 56514 57986 1473 Locate
psaI gene + 58454 58564 111 Locate
pafII gene + 59013 59567 555 Locate
cemA gene + 60211 60900 690 Locate
petA gene + 61121 62083 963 Locate
psbJ gene − 63079 63201 123 Locate
psbL gene − 63331 63447 117 Locate
psbF gene − 63471 63590 120 Locate
psbE gene − 63605 63856 252 Locate
petL gene + 64755 64850 96 Locate
petG gene + 65030 65143 114 Locate
trnW-CCA gene − 65259 65332 74 Locate
trnP-UGG gene − 65507 65580 74 Locate
psaJ gene + 65850 65984 135 Locate
rpl33 gene + 66422 66622 201 Locate
rps18 gene + 66793 67098 306 Locate
rpl20 gene − 67333 67719 387 Locate
rps12 gene − 68512 68625 114 Locate
clpP1 gene − 68748 70650 1903 Locate
psbB gene + 71104 72630 1527 Locate
psbT gene + 72784 72891 108 Locate
psbN gene − 72952 73083 132 Locate
psbH gene + 73171 73410 240 Locate
petB gene + 73536 74908 1373 Locate
petD gene + 75096 76286 1191 Locate
rpoA gene − 76463 77470 1008 Locate
rps11 gene − 77541 77957 417 Locate
rpl36 gene − 78067 78180 114 Locate
infA gene − 78276 78509 234 Locate
rps8 gene − 78630 79034 405 Locate
rpl14 gene − 79205 79573 369 Locate
rpl16 gene − 79703 80972 1270 Locate
rps3 gene − 81115 81777 663 Locate
rpl22 gene − 81762 82229 468 Locate
rps19 gene − 82293 82571 279 Locate
rpl2 gene − 82638 84125 1488 Locate
rpl23 gene − 84144 84425 282 Locate
trnI-CAU gene − 84591 84664 74 Locate
ycf2 gene + 84753 91586 6834 Locate
ycf15 gene + 91662 91925 264 Locate
trnL-CAA gene − 92181 92261 81 Locate
ndhB gene − 92812 95019 2208 Locate
rps7 gene − 95294 95761 468 Locate
rps12 gene − 95815 96608 794 Locate
trnV-GAC gene + 98216 98287 72 Locate
rrn16 gene + 98514 100004 1491 Locate
trnI-GAU gene + 100303 101322 1020 Locate
trnA-UGC gene + 101387 102264 878 Locate
rrn23 gene + 102425 105235 2811 Locate
rrn4.5 gene + 105336 105438 103 Locate
rrn5 gene + 105688 105808 121 Locate
trnR-ACG gene + 106052 106125 74 Locate
trnN-GUU gene − 106644 106715 72 Locate
ycf1 gene + 107045 108196 1152 Locate
ndhF gene − 108063 110294 2232 Locate
rpl32 gene + 110725 110922 198 Locate
trnL-UAG gene + 111649 111728 80 Locate
ccsA gene + 111826 112797 972 Locate
ndhD gene − 113026 114540 1515 Locate
psaC gene − 114662 114907 246 Locate
ndhE gene − 115158 115460 303 Locate
ndhG gene − 115693 116223 531 Locate
ndhI gene − 116597 117103 507 Locate
ndhA gene − 117184 119306 2123 Locate
ndhH gene − 119308 120543 1236 Locate
rps15 gene − 120589 120861 273 Locate
ycf1 gene − 121251 126881 5631 Locate
trnN-GUU gene + 127100 127171 72 Locate
trnR-ACG gene − 127690 127763 74 Locate
rrn5 gene − 128007 128127 121 Locate
rrn4.5 gene − 128377 128479 103 Locate
rrn23 gene − 128580 131390 2811 Locate
trnA-UGC gene − 131551 132428 878 Locate
trnI-GAU gene − 132493 133512 1020 Locate
rrn16 gene − 133811 135301 1491 Locate
trnV-GAC gene − 135528 135599 72 Locate
rps12 gene + 137207 138000 794 Locate
rps7 gene + 138054 138521 468 Locate
ndhB gene + 138796 141003 2208 Locate
trnL-CAA gene + 141554 141634 81 Locate
ycf15 gene − 141890 142153 264 Locate
ycf2 gene − 142229 149062 6834 Locate
trnI-CAU gene + 149151 149224 74 Locate
rpl23 gene + 149390 149671 282 Locate
rpl2 gene + 149690 151177 1488 Locate
rps19 gene + 151244 151286 43 Locate
Status Available
Accession PV972776.1
Length 151,286 bp
GC content 37.9%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources