Salvia kronenburgii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870861.1 · 11–84 bp · −
psbA · PV870861.1 · 414–1,472 bp · −
trnK-UUU · PV870861.1 · 1,704–4,292 bp · −
matK · PV870861.1 · 2,024–3,553 bp · −
rps16 · PV870861.1 · 4,863–5,972 bp · −
trnQ-UUG · PV870861.1 · 6,526–6,597 bp · −
trnS-GCU · PV870861.1 · 7,830–7,917 bp · −
atpA · PV870861.1 · 9,725–11,248 bp · −
atpF · PV870861.1 · 11,344–12,596 bp · −
atpH · PV870861.1 · 12,876–13,121 bp · −
atpI · PV870861.1 · 14,156–14,899 bp · −
rps2 · PV870861.1 · 15,124–15,834 bp · −
rpoC2 · PV870861.1 · 16,044–20,225 bp · −
rpoC1 · PV870861.1 · 20,390–23,206 bp · −
rpoB · PV870861.1 · 23,233–26,445 bp · −
psbM · PV870861.1 · 28,854–28,958 bp · −
trnD-GUC · PV870861.1 · 29,477–29,550 bp · −
trnY-GUA · PV870861.1 · 29,661–29,744 bp · −
trnE-UUC · PV870861.1 · 29,815–29,887 bp · −
trnS-UGA · PV870861.1 · 34,541–34,632 bp · −
trnfM-CAU · PV870861.1 · 35,688–35,761 bp · −
rps14 · PV870861.1 · 35,920–36,222 bp · −
psaB · PV870861.1 · 36,345–38,549 bp · −
psaA · PV870861.1 · 38,575–40,827 bp · −
ycf3 · PV870861.1 · 41,607–43,559 bp · −
rps4 · PV870861.1 · 44,442–45,047 bp · −
trnT-UGU · PV870861.1 · 45,407–45,479 bp · −
ndhJ · PV870861.1 · 47,735–48,211 bp · −
ndhK · PV870861.1 · 48,322–48,999 bp · −
ndhC · PV870861.1 · 49,051–49,413 bp · −
trnV-UAC · PV870861.1 · 50,373–51,020 bp · −
atpE · PV870861.1 · 51,484–51,885 bp · −
atpB · PV870861.1 · 51,882–53,378 bp · −
psbJ · PV870861.1 · 62,837–62,959 bp · −
psbL · PV870861.1 · 63,089–63,205 bp · −
psbF · PV870861.1 · 63,229–63,348 bp · −
psbE · PV870861.1 · 63,363–63,614 bp · −
trnW-CCA · PV870861.1 · 65,011–65,084 bp · −
trnP-UGG · PV870861.1 · 65,257–65,330 bp · −
rpl20 · PV870861.1 · 67,096–67,482 bp · −
rps12 · PV870861.1 · 68,279–68,392 bp · −
rps12 · PV870861.1 · 95,634–96,427 bp · −
clpP · PV870861.1 · 68,515–70,433 bp · −
psbN · PV870861.1 · 72,764–72,895 bp · −
rpoA · PV870861.1 · 76,268–77,275 bp · −
rps11 · PV870861.1 · 77,346–77,762 bp · −
rpl36 · PV870861.1 · 77,872–77,985 bp · −
infA · PV870861.1 · 78,081–78,314 bp · −
rps8 · PV870861.1 · 78,435–78,839 bp · −
rpl14 · PV870861.1 · 79,021–79,389 bp · −
rpl16 · PV870861.1 · 79,519–80,788 bp · −
rps3 · PV870861.1 · 80,931–81,593 bp · −
rpl22 · PV870861.1 · 81,578–82,045 bp · −
rps19 · PV870861.1 · 82,115–82,393 bp · −
rpl2 · PV870861.1 · 82,453–83,940 bp · −
rpl23 · PV870861.1 · 83,959–84,240 bp · −
trnI-CAU · PV870861.1 · 84,406–84,479 bp · −
trnL-CAA · PV870861.1 · 91,998–92,078 bp · −
ndhB · PV870861.1 · 92,631–94,838 bp · −
rps7 · PV870861.1 · 95,113–95,580 bp · −
trnN-GUU · PV870861.1 · 106,500–106,571 bp · −
ndhF · PV870861.1 · 107,925–110,156 bp · −
ndhD · PV870861.1 · 112,858–114,399 bp · −
psaC · PV870861.1 · 114,490–114,735 bp · −
ndhE · PV870861.1 · 114,986–115,291 bp · −
ndhG · PV870861.1 · 115,471–116,001 bp · −
ndhI · PV870861.1 · 116,375–116,881 bp · −
ndhA · PV870861.1 · 116,962–119,061 bp · −
ndhH · PV870861.1 · 119,063–120,244 bp · −
rps15 · PV870861.1 · 120,344–120,616 bp · −
ycf1 · PV870861.1 · 120,997–126,528 bp · −
trnR-ACG · PV870861.1 · 127,454–127,527 bp · −
rrn5S · PV870861.1 · 127,771–127,891 bp · −
rrn4.5S · PV870861.1 · 128,141–128,243 bp · −
rrn23S · PV870861.1 · 128,342–131,152 bp · −
trnA-UGC · PV870861.1 · 131,318–132,195 bp · −
trnI-GAU · PV870861.1 · 132,260–133,279 bp · −
rrn16S · PV870861.1 · 133,578–135,068 bp · −
trnV-GAC · PV870861.1 · 135,295–135,366 bp · −
ycf15 · PV870861.1 · 141,692–141,889 bp · −
ycf2 · PV870861.1 · 142,031–148,861 bp · −
psbK · PV870861.1 · 6,984–7,163 bp · +
psbI · PV870861.1 · 7,563–7,673 bp · +
trnG-UCC · PV870861.1 · 8,613–9,367 bp · +
trnR-UCU · PV870861.1 · 9,547–9,618 bp · +
trnC-GCA · PV870861.1 · 27,584–27,654 bp · +
petN · PV870861.1 · 27,818–27,907 bp · +
trnT-GGU · PV870861.1 · 30,443–30,514 bp · +
psbD · PV870861.1 · 31,865–32,926 bp · +
psbC · PV870861.1 · 32,874–34,295 bp · +
psbZ · PV870861.1 · 34,978–35,166 bp · +
trnG-GCC · PV870861.1 · 35,444–35,514 bp · +
trnS-GGA · PV870861.1 · 44,098–44,184 bp · +
trnL-UAA · PV870861.1 · 46,158–46,730 bp · +
trnF-GAA · PV870861.1 · 47,014–47,086 bp · +
trnM-CAU · PV870861.1 · 51,201–51,273 bp · +
rbcL · PV870861.1 · 54,170–55,615 bp · +
accD · PV870861.1 · 56,290–57,771 bp · +
psaI · PV870861.1 · 58,237–58,347 bp · +
ycf4 · PV870861.1 · 58,780–59,334 bp · +
cemA · PV870861.1 · 59,989–60,678 bp · +
petA · PV870861.1 · 60,886–61,848 bp · +
petL · PV870861.1 · 64,508–64,603 bp · +
petG · PV870861.1 · 64,783–64,899 bp · +
psaJ · PV870861.1 · 65,606–65,740 bp · +
rpl33 · PV870861.1 · 66,185–66,385 bp · +
rps18 · PV870861.1 · 66,556–66,861 bp · +
rps12 · PV870861.1 · 137,002–137,795 bp · +
psbB · PV870861.1 · 70,887–72,413 bp · +
psbT · PV870861.1 · 72,596–72,703 bp · +
psbH · PV870861.1 · 73,001–73,222 bp · +
petB · PV870861.1 · 73,348–74,724 bp · +
petD · PV870861.1 · 74,908–76,091 bp · +
ycf2 · PV870861.1 · 84,568–91,398 bp · +
ycf15 · PV870861.1 · 91,540–91,737 bp · +
trnV-GAC · PV870861.1 · 98,063–98,134 bp · +
rrn16S · PV870861.1 · 98,361–99,851 bp · +
trnI-GAU · PV870861.1 · 100,150–101,169 bp · +
trnA-UGC · PV870861.1 · 101,234–102,111 bp · +
rrn23S · PV870861.1 · 102,277–105,087 bp · +
rrn4.5S · PV870861.1 · 105,186–105,288 bp · +
rrn5S · PV870861.1 · 105,538–105,658 bp · +
trnR-ACG · PV870861.1 · 105,902–105,975 bp · +
rpl32 · PV870861.1 · 110,603–110,764 bp · +
trnL-UAG · PV870861.1 · 111,476–111,555 bp · +
ccsA · PV870861.1 · 111,652–112,623 bp · +
trnN-GUU · PV870861.1 · 126,858–126,929 bp · +
rps7 · PV870861.1 · 137,849–138,316 bp · +
ndhB · PV870861.1 · 138,591–140,798 bp · +
trnL-CAA · PV870861.1 · 141,351–141,431 bp · +
trnI-CAU · PV870861.1 · 148,950–149,023 bp · +
rpl23 · PV870861.1 · 149,189–149,470 bp · +
rpl2 · PV870861.1 · 149,489–150,976 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia kronenburgii
ANNOTATED PLASTOME
PV870861.1
151,078 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37770 75539 113308 151078 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 414 1472 1059 Locate
trnK-UUU gene − 1704 4292 2589 Locate
matK gene − 2024 3553 1530 Locate
rps16 gene − 4863 5972 1110 Locate
trnQ-UUG gene − 6526 6597 72 Locate
psbK gene + 6984 7163 180 Locate
psbI gene + 7563 7673 111 Locate
trnS-GCU gene − 7830 7917 88 Locate
trnG-UCC gene + 8613 9367 755 Locate
trnR-UCU gene + 9547 9618 72 Locate
atpA gene − 9725 11248 1524 Locate
atpF gene − 11344 12596 1253 Locate
atpH gene − 12876 13121 246 Locate
atpI gene − 14156 14899 744 Locate
rps2 gene − 15124 15834 711 Locate
rpoC2 gene − 16044 20225 4182 Locate
rpoC1 gene − 20390 23206 2817 Locate
rpoB gene − 23233 26445 3213 Locate
trnC-GCA gene + 27584 27654 71 Locate
petN gene + 27818 27907 90 Locate
psbM gene − 28854 28958 105 Locate
trnD-GUC gene − 29477 29550 74 Locate
trnY-GUA gene − 29661 29744 84 Locate
trnE-UUC gene − 29815 29887 73 Locate
trnT-GGU gene + 30443 30514 72 Locate
psbD gene + 31865 32926 1062 Locate
psbC gene + 32874 34295 1422 Locate
trnS-UGA gene − 34541 34632 92 Locate
psbZ gene + 34978 35166 189 Locate
trnG-GCC gene + 35444 35514 71 Locate
trnfM-CAU gene − 35688 35761 74 Locate
rps14 gene − 35920 36222 303 Locate
psaB gene − 36345 38549 2205 Locate
psaA gene − 38575 40827 2253 Locate
ycf3 gene − 41607 43559 1953 Locate
trnS-GGA gene + 44098 44184 87 Locate
rps4 gene − 44442 45047 606 Locate
trnT-UGU gene − 45407 45479 73 Locate
trnL-UAA gene + 46158 46730 573 Locate
trnF-GAA gene + 47014 47086 73 Locate
ndhJ gene − 47735 48211 477 Locate
ndhK gene − 48322 48999 678 Locate
ndhC gene − 49051 49413 363 Locate
trnV-UAC gene − 50373 51020 648 Locate
trnM-CAU gene + 51201 51273 73 Locate
atpE gene − 51484 51885 402 Locate
atpB gene − 51882 53378 1497 Locate
rbcL gene + 54170 55615 1446 Locate
accD gene + 56290 57771 1482 Locate
psaI gene + 58237 58347 111 Locate
ycf4 gene + 58780 59334 555 Locate
cemA gene + 59989 60678 690 Locate
petA gene + 60886 61848 963 Locate
psbJ gene − 62837 62959 123 Locate
psbL gene − 63089 63205 117 Locate
psbF gene − 63229 63348 120 Locate
psbE gene − 63363 63614 252 Locate
petL gene + 64508 64603 96 Locate
petG gene + 64783 64899 117 Locate
trnW-CCA gene − 65011 65084 74 Locate
trnP-UGG gene − 65257 65330 74 Locate
psaJ gene + 65606 65740 135 Locate
rpl33 gene + 66185 66385 201 Locate
rps18 gene + 66556 66861 306 Locate
rpl20 gene − 67096 67482 387 Locate
rps12 gene − 68279 68392 114 Locate
clpP gene − 68515 70433 1919 Locate
psbB gene + 70887 72413 1527 Locate
psbT gene + 72596 72703 108 Locate
psbN gene − 72764 72895 132 Locate
psbH gene + 73001 73222 222 Locate
petB gene + 73348 74724 1377 Locate
petD gene + 74908 76091 1184 Locate
rpoA gene − 76268 77275 1008 Locate
rps11 gene − 77346 77762 417 Locate
rpl36 gene − 77872 77985 114 Locate
infA gene − 78081 78314 234 Locate
rps8 gene − 78435 78839 405 Locate
rpl14 gene − 79021 79389 369 Locate
rpl16 gene − 79519 80788 1270 Locate
rps3 gene − 80931 81593 663 Locate
rpl22 gene − 81578 82045 468 Locate
rps19 gene − 82115 82393 279 Locate
rpl2 gene − 82453 83940 1488 Locate
rpl23 gene − 83959 84240 282 Locate
trnI-CAU gene − 84406 84479 74 Locate
ycf2 gene + 84568 91398 6831 Locate
ycf15 gene + 91540 91737 198 Locate
trnL-CAA gene − 91998 92078 81 Locate
ndhB gene − 92631 94838 2208 Locate
rps7 gene − 95113 95580 468 Locate
rps12 gene − 95634 96427 794 Locate
trnV-GAC gene + 98063 98134 72 Locate
rrn16S gene + 98361 99851 1491 Locate
trnI-GAU gene + 100150 101169 1020 Locate
trnA-UGC gene + 101234 102111 878 Locate
rrn23S gene + 102277 105087 2811 Locate
rrn4.5S gene + 105186 105288 103 Locate
rrn5S gene + 105538 105658 121 Locate
trnR-ACG gene + 105902 105975 74 Locate
trnN-GUU gene − 106500 106571 72 Locate
ndhF gene − 107925 110156 2232 Locate
rpl32 gene + 110603 110764 162 Locate
trnL-UAG gene + 111476 111555 80 Locate
ccsA gene + 111652 112623 972 Locate
ndhD gene − 112858 114399 1542 Locate
psaC gene − 114490 114735 246 Locate
ndhE gene − 114986 115291 306 Locate
ndhG gene − 115471 116001 531 Locate
ndhI gene − 116375 116881 507 Locate
ndhA gene − 116962 119061 2100 Locate
ndhH gene − 119063 120244 1182 Locate
rps15 gene − 120344 120616 273 Locate
ycf1 gene − 120997 126528 5532 Locate
trnN-GUU gene + 126858 126929 72 Locate
trnR-ACG gene − 127454 127527 74 Locate
rrn5S gene − 127771 127891 121 Locate
rrn4.5S gene − 128141 128243 103 Locate
rrn23S gene − 128342 131152 2811 Locate
trnA-UGC gene − 131318 132195 878 Locate
trnI-GAU gene − 132260 133279 1020 Locate
rrn16S gene − 133578 135068 1491 Locate
trnV-GAC gene − 135295 135366 72 Locate
rps12 gene + 137002 137795 794 Locate
rps7 gene + 137849 138316 468 Locate
ndhB gene + 138591 140798 2208 Locate
trnL-CAA gene + 141351 141431 81 Locate
ycf15 gene − 141692 141889 198 Locate
ycf2 gene − 142031 148861 6831 Locate
trnI-CAU gene + 148950 149023 74 Locate
rpl23 gene + 149189 149470 282 Locate
rpl2 gene + 149489 150976 1488 Locate
Status Available
Accession PV870861.1
Length 151,078 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources