Salvia lilacinocoerulea chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PV991053.1 · 3–77 bp · −
psbA · PV991053.1 · 372–1,430 bp · −
trnK-UUU · PV991053.1 · 1,653–4,238 bp · −
matK · PV991053.1 · 1,974–3,503 bp · −
rps16 · PV991053.1 · 4,812–5,915 bp · −
trnQ-UUG · PV991053.1 · 6,856–6,927 bp · −
trnS-GCU · PV991053.1 · 8,148–8,235 bp · −
atpA · PV991053.1 · 10,033–11,556 bp · −
atpF · PV991053.1 · 11,651–12,901 bp · −
atpH · PV991053.1 · 13,158–13,403 bp · −
atpI · PV991053.1 · 14,418–15,161 bp · −
rps2 · PV991053.1 · 15,387–16,097 bp · −
rpoC2 · PV991053.1 · 16,312–20,499 bp · −
rpoC1 · PV991053.1 · 20,666–23,489 bp · −
rpoB · PV991053.1 · 23,516–26,728 bp · −
psbM · PV991053.1 · 29,188–29,292 bp · −
trnD-GUC · PV991053.1 · 29,807–29,880 bp · −
trnY-GUA · PV991053.1 · 29,997–30,080 bp · −
trnE-UUC · PV991053.1 · 30,146–30,218 bp · −
trnS-UGA · PV991053.1 · 34,906–34,998 bp · −
trnfM-CAU · PV991053.1 · 36,042–36,115 bp · −
rps14 · PV991053.1 · 36,266–36,568 bp · −
psaB · PV991053.1 · 36,686–38,890 bp · −
psaA · PV991053.1 · 38,916–41,168 bp · −
pafI · PV991053.1 · 41,918–43,841 bp · −
rps4 · PV991053.1 · 45,029–45,634 bp · −
trnT-UGU · PV991053.1 · 45,983–46,055 bp · −
ndhJ · PV991053.1 · 48,221–48,697 bp · −
ndhK · PV991053.1 · 48,808–49,485 bp · −
ndhC · PV991053.1 · 49,537–49,899 bp · −
trnV-UAC · PV991053.1 · 50,861–51,517 bp · −
atpE · PV991053.1 · 51,966–52,367 bp · −
atpB · PV991053.1 · 52,364–53,860 bp · −
psbJ · PV991053.1 · 63,298–63,420 bp · −
psbL · PV991053.1 · 63,555–63,671 bp · −
psbF · PV991053.1 · 63,695–63,814 bp · −
psbE · PV991053.1 · 63,829–64,080 bp · −
trnW-CCA · PV991053.1 · 65,494–65,567 bp · −
trnP-UGG · PV991053.1 · 65,734–65,807 bp · −
rpl20 · PV991053.1 · 67,598–67,984 bp · −
rps12 · PV991053.1 · 68,773–68,886 bp · −
rps12 · PV991053.1 · 96,131–96,924 bp · −
clpP1 · PV991053.1 · 69,014–70,922 bp · −
psbN · PV991053.1 · 73,239–73,370 bp · −
rpoA · PV991053.1 · 76,755–77,762 bp · −
rps11 · PV991053.1 · 77,837–78,241 bp · −
rpl36 · PV991053.1 · 78,351–78,464 bp · −
infA · PV991053.1 · 78,560–78,793 bp · −
rps8 · PV991053.1 · 78,923–79,327 bp · −
rpl14 · PV991053.1 · 79,497–79,865 bp · −
rpl16 · PV991053.1 · 79,996–81,250 bp · −
rps3 · PV991053.1 · 81,386–82,048 bp · −
rpl22 · PV991053.1 · 82,033–82,500 bp · −
rps19 · PV991053.1 · 82,570–82,848 bp · −
rpl2 · PV991053.1 · 82,908–84,392 bp · −
rpl23 · PV991053.1 · 84,411–84,692 bp · −
trnI-CAU · PV991053.1 · 84,858–84,931 bp · −
trnL-CAA · PV991053.1 · 92,483–92,563 bp · −
ndhB · PV991053.1 · 93,122–95,335 bp · −
rps7 · PV991053.1 · 95,610–96,077 bp · −
trnN-GUU · PV991053.1 · 106,982–107,053 bp · −
ndhF · PV991053.1 · 108,406–110,637 bp · −
ndhD · PV991053.1 · 113,338–114,834 bp · −
psaC · PV991053.1 · 114,966–115,211 bp · −
ndhE · PV991053.1 · 115,462–115,767 bp · −
ndhG · PV991053.1 · 115,983–116,513 bp · −
ndhI · PV991053.1 · 116,884–117,390 bp · −
ndhA · PV991053.1 · 117,471–119,575 bp · −
ndhH · PV991053.1 · 119,577–120,758 bp · −
rps15 · PV991053.1 · 120,862–121,134 bp · −
ycf1 · PV991053.1 · 121,548–127,067 bp · −
trnR-ACG · PV991053.1 · 127,991–128,064 bp · −
rrn5 · PV991053.1 · 128,309–128,429 bp · −
rrn4.5 · PV991053.1 · 128,685–128,787 bp · −
rrn23 · PV991053.1 · 128,886–131,695 bp · −
trnA-UGC · PV991053.1 · 131,848–132,719 bp · −
trnI-GAU · PV991053.1 · 132,784–133,802 bp · −
rrn16 · PV991053.1 · 134,101–135,591 bp · −
trnV-GAC · PV991053.1 · 135,818–135,889 bp · −
ycf15 · PV991053.1 · 142,227–142,490 bp · −
ycf2 · PV991053.1 · 142,566–149,429 bp · −
psbK · PV991053.1 · 7,310–7,495 bp · +
psbI · PV991053.1 · 7,873–7,983 bp · +
trnG-UCC · PV991053.1 · 8,934–9,683 bp · +
trnR-UCU · PV991053.1 · 9,855–9,926 bp · +
trnC-GCA · PV991053.1 · 27,887–27,957 bp · +
petN · PV991053.1 · 28,121–28,210 bp · +
trnT-GGU · PV991053.1 · 30,787–30,858 bp · +
psbD · PV991053.1 · 32,229–33,290 bp · +
psbC · PV991053.1 · 33,238–34,659 bp · +
psbZ · PV991053.1 · 35,252–35,515 bp · +
trnG-GCC · PV991053.1 · 35,786–35,856 bp · +
trnS-GGA · PV991053.1 · 44,661–44,747 bp · +
trnL-UAA · PV991053.1 · 46,745–47,318 bp · +
trnF-GAA · PV991053.1 · 47,617–47,689 bp · +
trnM-CAU · PV991053.1 · 51,698–51,770 bp · +
rbcL · PV991053.1 · 54,661–56,094 bp · +
accD · PV991053.1 · 56,728–58,167 bp · +
psaI · PV991053.1 · 58,631–58,741 bp · +
pafII · PV991053.1 · 59,185–59,739 bp · +
cemA · PV991053.1 · 60,392–61,081 bp · +
petA · PV991053.1 · 61,303–62,265 bp · +
petL · PV991053.1 · 65,003–65,098 bp · +
petG · PV991053.1 · 65,277–65,390 bp · +
psaJ · PV991053.1 · 66,100–66,234 bp · +
rpl33 · PV991053.1 · 66,682–66,882 bp · +
rps18 · PV991053.1 · 67,057–67,362 bp · +
rps12 · PV991053.1 · 137,525–138,318 bp · +
psbB · PV991053.1 · 71,361–72,887 bp · +
psbT · PV991053.1 · 73,075–73,182 bp · +
psbH · PV991053.1 · 73,476–73,697 bp · +
petB · PV991053.1 · 73,823–75,208 bp · +
petD · PV991053.1 · 75,396–76,578 bp · +
ycf2 · PV991053.1 · 85,020–91,883 bp · +
ycf15 · PV991053.1 · 91,959–92,222 bp · +
trnV-GAC · PV991053.1 · 98,560–98,631 bp · +
rrn16 · PV991053.1 · 98,858–100,348 bp · +
trnI-GAU · PV991053.1 · 100,647–101,665 bp · +
trnA-UGC · PV991053.1 · 101,730–102,601 bp · +
rrn23 · PV991053.1 · 102,754–105,563 bp · +
rrn4.5 · PV991053.1 · 105,662–105,764 bp · +
rrn5 · PV991053.1 · 106,020–106,140 bp · +
trnR-ACG · PV991053.1 · 106,385–106,458 bp · +
ycf1 · PV991053.1 · 107,382–108,539 bp · +
rpl32 · PV991053.1 · 111,075–111,254 bp · +
trnL-UAG · PV991053.1 · 111,959–112,038 bp · +
ccsA · PV991053.1 · 112,134–113,111 bp · +
trnN-GUU · PV991053.1 · 127,396–127,467 bp · +
rps7 · PV991053.1 · 138,372–138,839 bp · +
ndhB · PV991053.1 · 139,114–141,327 bp · +
trnL-CAA · PV991053.1 · 141,886–141,966 bp · +
trnI-CAU · PV991053.1 · 149,518–149,591 bp · +
rpl23 · PV991053.1 · 149,757–150,038 bp · +
rpl2 · PV991053.1 · 150,057–151,541 bp · +
rps19 · PV991053.1 · 151,601–151,653 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia lilacinocoerulea
ANNOTATED PLASTOME
PV991053.1
151,653 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37913 75826 113740 151653 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 77 75 Locate
psbA gene − 372 1430 1059 Locate
trnK-UUU gene − 1653 4238 2586 Locate
matK gene − 1974 3503 1530 Locate
rps16 gene − 4812 5915 1104 Locate
trnQ-UUG gene − 6856 6927 72 Locate
psbK gene + 7310 7495 186 Locate
psbI gene + 7873 7983 111 Locate
trnS-GCU gene − 8148 8235 88 Locate
trnG-UCC gene + 8934 9683 750 Locate
trnR-UCU gene + 9855 9926 72 Locate
atpA gene − 10033 11556 1524 Locate
atpF gene − 11651 12901 1251 Locate
atpH gene − 13158 13403 246 Locate
atpI gene − 14418 15161 744 Locate
rps2 gene − 15387 16097 711 Locate
rpoC2 gene − 16312 20499 4188 Locate
rpoC1 gene − 20666 23489 2824 Locate
rpoB gene − 23516 26728 3213 Locate
trnC-GCA gene + 27887 27957 71 Locate
petN gene + 28121 28210 90 Locate
psbM gene − 29188 29292 105 Locate
trnD-GUC gene − 29807 29880 74 Locate
trnY-GUA gene − 29997 30080 84 Locate
trnE-UUC gene − 30146 30218 73 Locate
trnT-GGU gene + 30787 30858 72 Locate
psbD gene + 32229 33290 1062 Locate
psbC gene + 33238 34659 1422 Locate
trnS-UGA gene − 34906 34998 93 Locate
psbZ gene + 35252 35515 264 Locate
trnG-GCC gene + 35786 35856 71 Locate
trnfM-CAU gene − 36042 36115 74 Locate
rps14 gene − 36266 36568 303 Locate
psaB gene − 36686 38890 2205 Locate
psaA gene − 38916 41168 2253 Locate
pafI gene − 41918 43841 1924 Locate
trnS-GGA gene + 44661 44747 87 Locate
rps4 gene − 45029 45634 606 Locate
trnT-UGU gene − 45983 46055 73 Locate
trnL-UAA gene + 46745 47318 574 Locate
trnF-GAA gene + 47617 47689 73 Locate
ndhJ gene − 48221 48697 477 Locate
ndhK gene − 48808 49485 678 Locate
ndhC gene − 49537 49899 363 Locate
trnV-UAC gene − 50861 51517 657 Locate
trnM-CAU gene + 51698 51770 73 Locate
atpE gene − 51966 52367 402 Locate
atpB gene − 52364 53860 1497 Locate
rbcL gene + 54661 56094 1434 Locate
accD gene + 56728 58167 1440 Locate
psaI gene + 58631 58741 111 Locate
pafII gene + 59185 59739 555 Locate
cemA gene + 60392 61081 690 Locate
petA gene + 61303 62265 963 Locate
psbJ gene − 63298 63420 123 Locate
psbL gene − 63555 63671 117 Locate
psbF gene − 63695 63814 120 Locate
psbE gene − 63829 64080 252 Locate
petL gene + 65003 65098 96 Locate
petG gene + 65277 65390 114 Locate
trnW-CCA gene − 65494 65567 74 Locate
trnP-UGG gene − 65734 65807 74 Locate
psaJ gene + 66100 66234 135 Locate
rpl33 gene + 66682 66882 201 Locate
rps18 gene + 67057 67362 306 Locate
rpl20 gene − 67598 67984 387 Locate
rps12 gene − 68773 68886 114 Locate
clpP1 gene − 69014 70922 1909 Locate
psbB gene + 71361 72887 1527 Locate
psbT gene + 73075 73182 108 Locate
psbN gene − 73239 73370 132 Locate
psbH gene + 73476 73697 222 Locate
petB gene + 73823 75208 1386 Locate
petD gene + 75396 76578 1183 Locate
rpoA gene − 76755 77762 1008 Locate
rps11 gene − 77837 78241 405 Locate
rpl36 gene − 78351 78464 114 Locate
infA gene − 78560 78793 234 Locate
rps8 gene − 78923 79327 405 Locate
rpl14 gene − 79497 79865 369 Locate
rpl16 gene − 79996 81250 1255 Locate
rps3 gene − 81386 82048 663 Locate
rpl22 gene − 82033 82500 468 Locate
rps19 gene − 82570 82848 279 Locate
rpl2 gene − 82908 84392 1485 Locate
rpl23 gene − 84411 84692 282 Locate
trnI-CAU gene − 84858 84931 74 Locate
ycf2 gene + 85020 91883 6864 Locate
ycf15 gene + 91959 92222 264 Locate
trnL-CAA gene − 92483 92563 81 Locate
ndhB gene − 93122 95335 2214 Locate
rps7 gene − 95610 96077 468 Locate
rps12 gene − 96131 96924 794 Locate
trnV-GAC gene + 98560 98631 72 Locate
rrn16 gene + 98858 100348 1491 Locate
trnI-GAU gene + 100647 101665 1019 Locate
trnA-UGC gene + 101730 102601 872 Locate
rrn23 gene + 102754 105563 2810 Locate
rrn4.5 gene + 105662 105764 103 Locate
rrn5 gene + 106020 106140 121 Locate
trnR-ACG gene + 106385 106458 74 Locate
trnN-GUU gene − 106982 107053 72 Locate
ycf1 gene + 107382 108539 1158 Locate
ndhF gene − 108406 110637 2232 Locate
rpl32 gene + 111075 111254 180 Locate
trnL-UAG gene + 111959 112038 80 Locate
ccsA gene + 112134 113111 978 Locate
ndhD gene − 113338 114834 1497 Locate
psaC gene − 114966 115211 246 Locate
ndhE gene − 115462 115767 306 Locate
ndhG gene − 115983 116513 531 Locate
ndhI gene − 116884 117390 507 Locate
ndhA gene − 117471 119575 2105 Locate
ndhH gene − 119577 120758 1182 Locate
rps15 gene − 120862 121134 273 Locate
ycf1 gene − 121548 127067 5520 Locate
trnN-GUU gene + 127396 127467 72 Locate
trnR-ACG gene − 127991 128064 74 Locate
rrn5 gene − 128309 128429 121 Locate
rrn4.5 gene − 128685 128787 103 Locate
rrn23 gene − 128886 131695 2810 Locate
trnA-UGC gene − 131848 132719 872 Locate
trnI-GAU gene − 132784 133802 1019 Locate
rrn16 gene − 134101 135591 1491 Locate
trnV-GAC gene − 135818 135889 72 Locate
rps12 gene + 137525 138318 794 Locate
rps7 gene + 138372 138839 468 Locate
ndhB gene + 139114 141327 2214 Locate
trnL-CAA gene + 141886 141966 81 Locate
ycf15 gene − 142227 142490 264 Locate
ycf2 gene − 142566 149429 6864 Locate
trnI-CAU gene + 149518 149591 74 Locate
rpl23 gene + 149757 150038 282 Locate
rpl2 gene + 150057 151541 1485 Locate
rps19 gene + 151601 151653 53 Locate
Status Available
Accession PV991053.1
Length 151,653 bp
GC content 38.0%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources