Salvia limbata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870862.1 · 11–84 bp · −
psbA · PV870862.1 · 388–1,446 bp · −
trnK-UUU · PV870862.1 · 1,678–4,267 bp · −
matK · PV870862.1 · 1,998–3,527 bp · −
rps16 · PV870862.1 · 4,826–5,914 bp · −
trnQ-UUG · PV870862.1 · 6,458–6,529 bp · −
trnS-GCU · PV870862.1 · 7,742–7,829 bp · −
atpA · PV870862.1 · 9,670–11,193 bp · −
atpF · PV870862.1 · 11,289–12,547 bp · −
atpH · PV870862.1 · 12,819–13,064 bp · −
atpI · PV870862.1 · 13,985–14,728 bp · −
rps2 · PV870862.1 · 14,953–15,663 bp · −
rpoC2 · PV870862.1 · 15,882–20,069 bp · −
rpoC1 · PV870862.1 · 20,234–23,044 bp · −
rpoB · PV870862.1 · 23,071–26,283 bp · −
psbM · PV870862.1 · 28,735–28,839 bp · −
trnD-GUC · PV870862.1 · 29,350–29,423 bp · −
trnY-GUA · PV870862.1 · 29,534–29,617 bp · −
trnE-UUC · PV870862.1 · 29,688–29,760 bp · −
trnS-UGA · PV870862.1 · 34,417–34,508 bp · −
trnfM-CAU · PV870862.1 · 35,549–35,622 bp · −
rps14 · PV870862.1 · 35,767–36,069 bp · −
psaB · PV870862.1 · 36,196–38,400 bp · −
psaA · PV870862.1 · 38,426–40,678 bp · −
ycf3 · PV870862.1 · 41,471–43,428 bp · −
rps4 · PV870862.1 · 44,549–45,154 bp · −
trnT-UGU · PV870862.1 · 45,515–45,587 bp · −
ndhJ · PV870862.1 · 47,842–48,318 bp · −
ndhK · PV870862.1 · 48,429–49,106 bp · −
ndhC · PV870862.1 · 49,158–49,520 bp · −
trnV-UAC · PV870862.1 · 50,490–51,138 bp · −
atpE · PV870862.1 · 51,602–52,003 bp · −
atpB · PV870862.1 · 52,000–53,496 bp · −
psbJ · PV870862.1 · 62,968–63,090 bp · −
psbL · PV870862.1 · 63,220–63,336 bp · −
psbF · PV870862.1 · 63,360–63,479 bp · −
psbE · PV870862.1 · 63,494–63,745 bp · −
trnW-CCA · PV870862.1 · 65,149–65,222 bp · −
trnP-UGG · PV870862.1 · 65,397–65,470 bp · −
rpl20 · PV870862.1 · 67,234–67,620 bp · −
rps12 · PV870862.1 · 68,414–68,527 bp · −
rps12 · PV870862.1 · 95,735–96,528 bp · −
clpP · PV870862.1 · 68,650–70,550 bp · −
psbN · PV870862.1 · 72,882–73,013 bp · −
rpoA · PV870862.1 · 76,394–77,401 bp · −
rps11 · PV870862.1 · 77,472–77,888 bp · −
rpl36 · PV870862.1 · 77,993–78,106 bp · −
infA · PV870862.1 · 78,202–78,435 bp · −
rps8 · PV870862.1 · 78,556–78,960 bp · −
rpl14 · PV870862.1 · 79,132–79,500 bp · −
rpl16 · PV870862.1 · 79,630–80,899 bp · −
rps3 · PV870862.1 · 81,041–81,703 bp · −
rpl22 · PV870862.1 · 81,688–82,155 bp · −
rps19 · PV870862.1 · 82,219–82,497 bp · −
rpl2 · PV870862.1 · 82,557–84,044 bp · −
rpl23 · PV870862.1 · 84,063–84,344 bp · −
trnI-CAU · PV870862.1 · 84,510–84,583 bp · −
trnL-CAA · PV870862.1 · 92,100–92,180 bp · −
ndhB · PV870862.1 · 92,732–94,939 bp · −
rps7 · PV870862.1 · 95,214–95,681 bp · −
trnN-GUU · PV870862.1 · 106,564–106,635 bp · −
ndhF · PV870862.1 · 107,983–110,214 bp · −
ndhD · PV870862.1 · 112,944–114,485 bp · −
psaC · PV870862.1 · 114,582–114,827 bp · −
ndhE · PV870862.1 · 115,078–115,383 bp · −
ndhG · PV870862.1 · 115,613–116,143 bp · −
ndhI · PV870862.1 · 116,517–117,023 bp · −
ndhA · PV870862.1 · 117,104–119,200 bp · −
ndhH · PV870862.1 · 119,202–120,383 bp · −
rps15 · PV870862.1 · 120,483–120,755 bp · −
ycf1 · PV870862.1 · 121,145–126,664 bp · −
trnR-ACG · PV870862.1 · 127,584–127,657 bp · −
rrn5S · PV870862.1 · 127,901–128,021 bp · −
rrn4.5S · PV870862.1 · 128,271–128,373 bp · −
rrn23S · PV870862.1 · 128,472–131,284 bp · −
trnA-UGC · PV870862.1 · 131,445–132,322 bp · −
trnI-GAU · PV870862.1 · 132,387–133,406 bp · −
rrn16S · PV870862.1 · 133,705–135,195 bp · −
trnV-GAC · PV870862.1 · 135,422–135,493 bp · −
ycf15 · PV870862.1 · 141,785–141,982 bp · −
ycf2 · PV870862.1 · 142,124–148,957 bp · −
psbK · PV870862.1 · 6,909–7,088 bp · +
psbI · PV870862.1 · 7,494–7,604 bp · +
trnG-UCC · PV870862.1 · 8,558–9,312 bp · +
trnR-UCU · PV870862.1 · 9,493–9,564 bp · +
trnC-GCA · PV870862.1 · 27,424–27,494 bp · +
petN · PV870862.1 · 27,658–27,747 bp · +
trnT-GGU · PV870862.1 · 30,326–30,397 bp · +
psbD · PV870862.1 · 31,738–32,799 bp · +
psbC · PV870862.1 · 32,747–34,168 bp · +
psbZ · PV870862.1 · 34,838–35,026 bp · +
trnG-GCC · PV870862.1 · 35,302–35,372 bp · +
trnS-GGA · PV870862.1 · 44,279–44,365 bp · +
trnL-UAA · PV870862.1 · 46,279–46,843 bp · +
trnF-GAA · PV870862.1 · 47,127–47,199 bp · +
trnM-CAU · PV870862.1 · 51,324–51,396 bp · +
rbcL · PV870862.1 · 54,295–55,728 bp · +
accD · PV870862.1 · 56,422–57,894 bp · +
psaI · PV870862.1 · 58,361–58,471 bp · +
ycf4 · PV870862.1 · 58,918–59,472 bp · +
cemA · PV870862.1 · 60,116–60,805 bp · +
petA · PV870862.1 · 61,009–61,971 bp · +
petL · PV870862.1 · 64,646–64,741 bp · +
petG · PV870862.1 · 64,920–65,033 bp · +
psaJ · PV870862.1 · 65,741–65,875 bp · +
rpl33 · PV870862.1 · 66,322–66,522 bp · +
rps18 · PV870862.1 · 66,694–66,999 bp · +
rps12 · PV870862.1 · 137,101–137,894 bp · +
psbB · PV870862.1 · 71,004–72,530 bp · +
psbT · PV870862.1 · 72,714–72,821 bp · +
psbH · PV870862.1 · 73,119–73,340 bp · +
petB · PV870862.1 · 73,466–74,839 bp · +
petD · PV870862.1 · 75,027–76,217 bp · +
ycf2 · PV870862.1 · 84,672–91,505 bp · +
ycf15 · PV870862.1 · 91,647–91,844 bp · +
trnV-GAC · PV870862.1 · 98,136–98,207 bp · +
rrn16S · PV870862.1 · 98,434–99,924 bp · +
trnI-GAU · PV870862.1 · 100,223–101,242 bp · +
trnA-UGC · PV870862.1 · 101,307–102,184 bp · +
rrn23S · PV870862.1 · 102,345–105,157 bp · +
rrn4.5S · PV870862.1 · 105,256–105,358 bp · +
rrn5S · PV870862.1 · 105,608–105,728 bp · +
trnR-ACG · PV870862.1 · 105,972–106,045 bp · +
rpl32 · PV870862.1 · 110,671–110,841 bp · +
trnL-UAG · PV870862.1 · 111,567–111,646 bp · +
ccsA · PV870862.1 · 111,744–112,715 bp · +
trnN-GUU · PV870862.1 · 126,994–127,065 bp · +
rps7 · PV870862.1 · 137,948–138,415 bp · +
ndhB · PV870862.1 · 138,690–140,897 bp · +
trnL-CAA · PV870862.1 · 141,449–141,529 bp · +
trnI-CAU · PV870862.1 · 149,046–149,119 bp · +
rpl23 · PV870862.1 · 149,285–149,566 bp · +
rpl2 · PV870862.1 · 149,585–151,072 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia limbata
ANNOTATED PLASTOME
PV870862.1
151,174 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37794 75587 113380 151174 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 388 1446 1059 Locate
trnK-UUU gene − 1678 4267 2590 Locate
matK gene − 1998 3527 1530 Locate
rps16 gene − 4826 5914 1089 Locate
trnQ-UUG gene − 6458 6529 72 Locate
psbK gene + 6909 7088 180 Locate
psbI gene + 7494 7604 111 Locate
trnS-GCU gene − 7742 7829 88 Locate
trnG-UCC gene + 8558 9312 755 Locate
trnR-UCU gene + 9493 9564 72 Locate
atpA gene − 9670 11193 1524 Locate
atpF gene − 11289 12547 1259 Locate
atpH gene − 12819 13064 246 Locate
atpI gene − 13985 14728 744 Locate
rps2 gene − 14953 15663 711 Locate
rpoC2 gene − 15882 20069 4188 Locate
rpoC1 gene − 20234 23044 2811 Locate
rpoB gene − 23071 26283 3213 Locate
trnC-GCA gene + 27424 27494 71 Locate
petN gene + 27658 27747 90 Locate
psbM gene − 28735 28839 105 Locate
trnD-GUC gene − 29350 29423 74 Locate
trnY-GUA gene − 29534 29617 84 Locate
trnE-UUC gene − 29688 29760 73 Locate
trnT-GGU gene + 30326 30397 72 Locate
psbD gene + 31738 32799 1062 Locate
psbC gene + 32747 34168 1422 Locate
trnS-UGA gene − 34417 34508 92 Locate
psbZ gene + 34838 35026 189 Locate
trnG-GCC gene + 35302 35372 71 Locate
trnfM-CAU gene − 35549 35622 74 Locate
rps14 gene − 35767 36069 303 Locate
psaB gene − 36196 38400 2205 Locate
psaA gene − 38426 40678 2253 Locate
ycf3 gene − 41471 43428 1958 Locate
trnS-GGA gene + 44279 44365 87 Locate
rps4 gene − 44549 45154 606 Locate
trnT-UGU gene − 45515 45587 73 Locate
trnL-UAA gene + 46279 46843 565 Locate
trnF-GAA gene + 47127 47199 73 Locate
ndhJ gene − 47842 48318 477 Locate
ndhK gene − 48429 49106 678 Locate
ndhC gene − 49158 49520 363 Locate
trnV-UAC gene − 50490 51138 649 Locate
trnM-CAU gene + 51324 51396 73 Locate
atpE gene − 51602 52003 402 Locate
atpB gene − 52000 53496 1497 Locate
rbcL gene + 54295 55728 1434 Locate
accD gene + 56422 57894 1473 Locate
psaI gene + 58361 58471 111 Locate
ycf4 gene + 58918 59472 555 Locate
cemA gene + 60116 60805 690 Locate
petA gene + 61009 61971 963 Locate
psbJ gene − 62968 63090 123 Locate
psbL gene − 63220 63336 117 Locate
psbF gene − 63360 63479 120 Locate
psbE gene − 63494 63745 252 Locate
petL gene + 64646 64741 96 Locate
petG gene + 64920 65033 114 Locate
trnW-CCA gene − 65149 65222 74 Locate
trnP-UGG gene − 65397 65470 74 Locate
psaJ gene + 65741 65875 135 Locate
rpl33 gene + 66322 66522 201 Locate
rps18 gene + 66694 66999 306 Locate
rpl20 gene − 67234 67620 387 Locate
rps12 gene − 68414 68527 114 Locate
clpP gene − 68650 70550 1901 Locate
psbB gene + 71004 72530 1527 Locate
psbT gene + 72714 72821 108 Locate
psbN gene − 72882 73013 132 Locate
psbH gene + 73119 73340 222 Locate
petB gene + 73466 74839 1374 Locate
petD gene + 75027 76217 1191 Locate
rpoA gene − 76394 77401 1008 Locate
rps11 gene − 77472 77888 417 Locate
rpl36 gene − 77993 78106 114 Locate
infA gene − 78202 78435 234 Locate
rps8 gene − 78556 78960 405 Locate
rpl14 gene − 79132 79500 369 Locate
rpl16 gene − 79630 80899 1270 Locate
rps3 gene − 81041 81703 663 Locate
rpl22 gene − 81688 82155 468 Locate
rps19 gene − 82219 82497 279 Locate
rpl2 gene − 82557 84044 1488 Locate
rpl23 gene − 84063 84344 282 Locate
trnI-CAU gene − 84510 84583 74 Locate
ycf2 gene + 84672 91505 6834 Locate
ycf15 gene + 91647 91844 198 Locate
trnL-CAA gene − 92100 92180 81 Locate
ndhB gene − 92732 94939 2208 Locate
rps7 gene − 95214 95681 468 Locate
rps12 gene − 95735 96528 794 Locate
trnV-GAC gene + 98136 98207 72 Locate
rrn16S gene + 98434 99924 1491 Locate
trnI-GAU gene + 100223 101242 1020 Locate
trnA-UGC gene + 101307 102184 878 Locate
rrn23S gene + 102345 105157 2813 Locate
rrn4.5S gene + 105256 105358 103 Locate
rrn5S gene + 105608 105728 121 Locate
trnR-ACG gene + 105972 106045 74 Locate
trnN-GUU gene − 106564 106635 72 Locate
ndhF gene − 107983 110214 2232 Locate
rpl32 gene + 110671 110841 171 Locate
trnL-UAG gene + 111567 111646 80 Locate
ccsA gene + 111744 112715 972 Locate
ndhD gene − 112944 114485 1542 Locate
psaC gene − 114582 114827 246 Locate
ndhE gene − 115078 115383 306 Locate
ndhG gene − 115613 116143 531 Locate
ndhI gene − 116517 117023 507 Locate
ndhA gene − 117104 119200 2097 Locate
ndhH gene − 119202 120383 1182 Locate
rps15 gene − 120483 120755 273 Locate
ycf1 gene − 121145 126664 5520 Locate
trnN-GUU gene + 126994 127065 72 Locate
trnR-ACG gene − 127584 127657 74 Locate
rrn5S gene − 127901 128021 121 Locate
rrn4.5S gene − 128271 128373 103 Locate
rrn23S gene − 128472 131284 2813 Locate
trnA-UGC gene − 131445 132322 878 Locate
trnI-GAU gene − 132387 133406 1020 Locate
rrn16S gene − 133705 135195 1491 Locate
trnV-GAC gene − 135422 135493 72 Locate
rps12 gene + 137101 137894 794 Locate
rps7 gene + 137948 138415 468 Locate
ndhB gene + 138690 140897 2208 Locate
trnL-CAA gene + 141449 141529 81 Locate
ycf15 gene − 141785 141982 198 Locate
ycf2 gene − 142124 148957 6834 Locate
trnI-CAU gene + 149046 149119 74 Locate
rpl23 gene + 149285 149566 282 Locate
rpl2 gene + 149585 151072 1488 Locate
Status Available
Accession PV870862.1
Length 151,174 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources