Salvia mohavensis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870863.1 · 4–77 bp · −
psbA · PV870863.1 · 397–1,455 bp · −
trnK-UUU · PV870863.1 · 1,682–4,261 bp · −
matK · PV870863.1 · 1,994–3,523 bp · −
rps16 · PV870863.1 · 4,821–5,918 bp · −
trnQ-UUG · PV870863.1 · 6,828–6,899 bp · −
trnS-GCU · PV870863.1 · 8,156–8,243 bp · −
atpA · PV870863.1 · 10,052–11,575 bp · −
atpF · PV870863.1 · 11,677–12,919 bp · −
atpH · PV870863.1 · 13,192–13,437 bp · −
atpI · PV870863.1 · 14,467–15,210 bp · −
rps2 · PV870863.1 · 15,435–16,145 bp · −
rpoC2 · PV870863.1 · 16,347–20,534 bp · −
rpoC1 · PV870863.1 · 20,700–23,514 bp · −
rpoB · PV870863.1 · 23,541–26,753 bp · −
psbM · PV870863.1 · 29,238–29,342 bp · −
trnD-GUC · PV870863.1 · 29,858–29,931 bp · −
trnY-GUA · PV870863.1 · 30,042–30,125 bp · −
trnE-UUC · PV870863.1 · 30,202–30,274 bp · −
trnS-UGA · PV870863.1 · 34,942–35,034 bp · −
trnfM-CAU · PV870863.1 · 36,050–36,123 bp · −
rps14 · PV870863.1 · 36,268–36,570 bp · −
psaB · PV870863.1 · 36,693–38,897 bp · −
psaA · PV870863.1 · 38,923–41,175 bp · −
ycf3 · PV870863.1 · 41,951–43,894 bp · −
rps4 · PV870863.1 · 45,079–45,684 bp · −
trnT-UGU · PV870863.1 · 46,045–46,117 bp · −
ndhJ · PV870863.1 · 48,284–48,760 bp · −
ndhK · PV870863.1 · 48,871–49,548 bp · −
ndhC · PV870863.1 · 49,600–49,962 bp · −
trnV-UAC · PV870863.1 · 50,909–51,550 bp · −
atpE · PV870863.1 · 52,013–52,414 bp · −
atpB · PV870863.1 · 52,411–53,907 bp · −
psbJ · PV870863.1 · 63,458–63,580 bp · −
psbL · PV870863.1 · 63,715–63,831 bp · −
psbF · PV870863.1 · 63,855–63,974 bp · −
psbE · PV870863.1 · 63,989–64,240 bp · −
trnW-CCA · PV870863.1 · 65,560–65,633 bp · −
trnP-UGG · PV870863.1 · 65,808–65,881 bp · −
rpl20 · PV870863.1 · 67,654–68,040 bp · −
rps12 · PV870863.1 · 68,840–68,953 bp · −
rps12 · PV870863.1 · 96,230–97,023 bp · −
clpP · PV870863.1 · 69,077–70,988 bp · −
psbN · PV870863.1 · 73,302–73,433 bp · −
rpoA · PV870863.1 · 76,832–77,839 bp · −
rps11 · PV870863.1 · 77,910–78,326 bp · −
rpl36 · PV870863.1 · 78,437–78,550 bp · −
infA · PV870863.1 · 78,650–78,883 bp · −
rps8 · PV870863.1 · 79,003–79,407 bp · −
rpl14 · PV870863.1 · 79,588–79,956 bp · −
rpl16 · PV870863.1 · 80,088–81,357 bp · −
rps3 · PV870863.1 · 81,500–82,162 bp · −
rpl22 · PV870863.1 · 82,147–82,614 bp · −
rps19 · PV870863.1 · 82,684–82,962 bp · −
rpl2 · PV870863.1 · 83,022–84,507 bp · −
rpl23 · PV870863.1 · 84,526–84,807 bp · −
trnI-CAU · PV870863.1 · 84,973–85,046 bp · −
trnL-CAA · PV870863.1 · 92,592–92,672 bp · −
ndhB · PV870863.1 · 93,233–95,380 bp · −
rps7 · PV870863.1 · 95,709–96,176 bp · −
trnN-GUU · PV870863.1 · 107,068–107,139 bp · −
ndhF · PV870863.1 · 108,487–110,718 bp · −
ndhD · PV870863.1 · 113,425–114,966 bp · −
psaC · PV870863.1 · 115,060–115,305 bp · −
ndhE · PV870863.1 · 115,556–115,861 bp · −
ndhG · PV870863.1 · 116,074–116,604 bp · −
ndhI · PV870863.1 · 116,983–117,489 bp · −
ndhA · PV870863.1 · 117,571–119,675 bp · −
ndhH · PV870863.1 · 119,677–120,858 bp · −
rps15 · PV870863.1 · 120,958–121,230 bp · −
ycf1 · PV870863.1 · 121,648–127,179 bp · −
trnR-ACG · PV870863.1 · 128,083–128,156 bp · −
rrn5S · PV870863.1 · 128,400–128,520 bp · −
rrn4.5S · PV870863.1 · 128,776–128,878 bp · −
rrn23S · PV870863.1 · 128,977–131,787 bp · −
trnA-UGC · PV870863.1 · 131,947–132,823 bp · −
trnI-GAU · PV870863.1 · 132,888–133,906 bp · −
rrn16S · PV870863.1 · 134,205–135,695 bp · −
trnV-GAC · PV870863.1 · 135,922–135,993 bp · −
ycf15 · PV870863.1 · 142,317–142,514 bp · −
ycf2 · PV870863.1 · 142,656–149,513 bp · −
psbK · PV870863.1 · 7,286–7,471 bp · +
psbI · PV870863.1 · 7,873–7,983 bp · +
trnG-UCC · PV870863.1 · 8,937–9,692 bp · +
trnR-UCU · PV870863.1 · 9,873–9,944 bp · +
trnC-GCA · PV870863.1 · 27,919–27,989 bp · +
petN · PV870863.1 · 28,145–28,234 bp · +
trnT-GGU · PV870863.1 · 30,833–30,904 bp · +
psbD · PV870863.1 · 32,263–33,324 bp · +
psbC · PV870863.1 · 33,272–34,693 bp · +
psbZ · PV870863.1 · 35,362–35,550 bp · +
trnG-GCC · PV870863.1 · 35,828–35,898 bp · +
trnS-GGA · PV870863.1 · 44,719–44,805 bp · +
trnL-UAA · PV870863.1 · 46,792–47,375 bp · +
trnF-GAA · PV870863.1 · 47,678–47,750 bp · +
trnM-CAU · PV870863.1 · 51,731–51,803 bp · +
rbcL · PV870863.1 · 54,708–56,141 bp · +
accD · PV870863.1 · 56,841–58,322 bp · +
psaI · PV870863.1 · 58,787–58,897 bp · +
ycf4 · PV870863.1 · 59,343–59,897 bp · +
cemA · PV870863.1 · 60,547–61,236 bp · +
petA · PV870863.1 · 61,462–62,424 bp · +
petL · PV870863.1 · 65,058–65,153 bp · +
petG · PV870863.1 · 65,332–65,445 bp · +
psaJ · PV870863.1 · 66,166–66,300 bp · +
rpl33 · PV870863.1 · 66,741–66,941 bp · +
rps18 · PV870863.1 · 67,114–67,419 bp · +
rps12 · PV870863.1 · 137,625–138,418 bp · +
psbB · PV870863.1 · 71,427–72,953 bp · +
psbT · PV870863.1 · 73,135–73,236 bp · +
psbH · PV870863.1 · 73,539–73,760 bp · +
petB · PV870863.1 · 73,886–75,277 bp · +
petD · PV870863.1 · 75,465–76,655 bp · +
ycf2 · PV870863.1 · 85,135–91,992 bp · +
ycf15 · PV870863.1 · 92,134–92,331 bp · +
trnV-GAC · PV870863.1 · 98,655–98,726 bp · +
rrn16S · PV870863.1 · 98,953–100,443 bp · +
trnI-GAU · PV870863.1 · 100,742–101,760 bp · +
trnA-UGC · PV870863.1 · 101,825–102,701 bp · +
rrn23S · PV870863.1 · 102,861–105,671 bp · +
rrn4.5S · PV870863.1 · 105,770–105,872 bp · +
rrn5S · PV870863.1 · 106,128–106,248 bp · +
trnR-ACG · PV870863.1 · 106,492–106,565 bp · +
rpl32 · PV870863.1 · 111,158–111,328 bp · +
trnL-UAG · PV870863.1 · 112,066–112,145 bp · +
ccsA · PV870863.1 · 112,242–113,219 bp · +
trnN-GUU · PV870863.1 · 127,509–127,580 bp · +
rps7 · PV870863.1 · 138,472–138,939 bp · +
ndhB · PV870863.1 · 139,268–141,415 bp · +
trnL-CAA · PV870863.1 · 141,976–142,056 bp · +
trnI-CAU · PV870863.1 · 149,602–149,675 bp · +
rpl23 · PV870863.1 · 149,841–150,122 bp · +
rpl2 · PV870863.1 · 150,141–151,626 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia mohavensis
ANNOTATED PLASTOME
PV870863.1
151,672 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37918 75836 113754 151672 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 397 1455 1059 Locate
trnK-UUU gene − 1682 4261 2580 Locate
matK gene − 1994 3523 1530 Locate
rps16 gene − 4821 5918 1098 Locate
trnQ-UUG gene − 6828 6899 72 Locate
psbK gene + 7286 7471 186 Locate
psbI gene + 7873 7983 111 Locate
trnS-GCU gene − 8156 8243 88 Locate
trnG-UCC gene + 8937 9692 756 Locate
trnR-UCU gene + 9873 9944 72 Locate
atpA gene − 10052 11575 1524 Locate
atpF gene − 11677 12919 1243 Locate
atpH gene − 13192 13437 246 Locate
atpI gene − 14467 15210 744 Locate
rps2 gene − 15435 16145 711 Locate
rpoC2 gene − 16347 20534 4188 Locate
rpoC1 gene − 20700 23514 2815 Locate
rpoB gene − 23541 26753 3213 Locate
trnC-GCA gene + 27919 27989 71 Locate
petN gene + 28145 28234 90 Locate
psbM gene − 29238 29342 105 Locate
trnD-GUC gene − 29858 29931 74 Locate
trnY-GUA gene − 30042 30125 84 Locate
trnE-UUC gene − 30202 30274 73 Locate
trnT-GGU gene + 30833 30904 72 Locate
psbD gene + 32263 33324 1062 Locate
psbC gene + 33272 34693 1422 Locate
trnS-UGA gene − 34942 35034 93 Locate
psbZ gene + 35362 35550 189 Locate
trnG-GCC gene + 35828 35898 71 Locate
trnfM-CAU gene − 36050 36123 74 Locate
rps14 gene − 36268 36570 303 Locate
psaB gene − 36693 38897 2205 Locate
psaA gene − 38923 41175 2253 Locate
ycf3 gene − 41951 43894 1944 Locate
trnS-GGA gene + 44719 44805 87 Locate
rps4 gene − 45079 45684 606 Locate
trnT-UGU gene − 46045 46117 73 Locate
trnL-UAA gene + 46792 47375 584 Locate
trnF-GAA gene + 47678 47750 73 Locate
ndhJ gene − 48284 48760 477 Locate
ndhK gene − 48871 49548 678 Locate
ndhC gene − 49600 49962 363 Locate
trnV-UAC gene − 50909 51550 642 Locate
trnM-CAU gene + 51731 51803 73 Locate
atpE gene − 52013 52414 402 Locate
atpB gene − 52411 53907 1497 Locate
rbcL gene + 54708 56141 1434 Locate
accD gene + 56841 58322 1482 Locate
psaI gene + 58787 58897 111 Locate
ycf4 gene + 59343 59897 555 Locate
cemA gene + 60547 61236 690 Locate
petA gene + 61462 62424 963 Locate
psbJ gene − 63458 63580 123 Locate
psbL gene − 63715 63831 117 Locate
psbF gene − 63855 63974 120 Locate
psbE gene − 63989 64240 252 Locate
petL gene + 65058 65153 96 Locate
petG gene + 65332 65445 114 Locate
trnW-CCA gene − 65560 65633 74 Locate
trnP-UGG gene − 65808 65881 74 Locate
psaJ gene + 66166 66300 135 Locate
rpl33 gene + 66741 66941 201 Locate
rps18 gene + 67114 67419 306 Locate
rpl20 gene − 67654 68040 387 Locate
rps12 gene − 68840 68953 114 Locate
clpP gene − 69077 70988 1912 Locate
psbB gene + 71427 72953 1527 Locate
psbT gene + 73135 73236 102 Locate
psbN gene − 73302 73433 132 Locate
psbH gene + 73539 73760 222 Locate
petB gene + 73886 75277 1392 Locate
petD gene + 75465 76655 1191 Locate
rpoA gene − 76832 77839 1008 Locate
rps11 gene − 77910 78326 417 Locate
rpl36 gene − 78437 78550 114 Locate
infA gene − 78650 78883 234 Locate
rps8 gene − 79003 79407 405 Locate
rpl14 gene − 79588 79956 369 Locate
rpl16 gene − 80088 81357 1270 Locate
rps3 gene − 81500 82162 663 Locate
rpl22 gene − 82147 82614 468 Locate
rps19 gene − 82684 82962 279 Locate
rpl2 gene − 83022 84507 1486 Locate
rpl23 gene − 84526 84807 282 Locate
trnI-CAU gene − 84973 85046 74 Locate
ycf2 gene + 85135 91992 6858 Locate
ycf15 gene + 92134 92331 198 Locate
trnL-CAA gene − 92592 92672 81 Locate
ndhB gene − 93233 95380 2148 Locate
rps7 gene − 95709 96176 468 Locate
rps12 gene − 96230 97023 794 Locate
trnV-GAC gene + 98655 98726 72 Locate
rrn16S gene + 98953 100443 1491 Locate
trnI-GAU gene + 100742 101760 1019 Locate
trnA-UGC gene + 101825 102701 877 Locate
rrn23S gene + 102861 105671 2811 Locate
rrn4.5S gene + 105770 105872 103 Locate
rrn5S gene + 106128 106248 121 Locate
trnR-ACG gene + 106492 106565 74 Locate
trnN-GUU gene − 107068 107139 72 Locate
ndhF gene − 108487 110718 2232 Locate
rpl32 gene + 111158 111328 171 Locate
trnL-UAG gene + 112066 112145 80 Locate
ccsA gene + 112242 113219 978 Locate
ndhD gene − 113425 114966 1542 Locate
psaC gene − 115060 115305 246 Locate
ndhE gene − 115556 115861 306 Locate
ndhG gene − 116074 116604 531 Locate
ndhI gene − 116983 117489 507 Locate
ndhA gene − 117571 119675 2105 Locate
ndhH gene − 119677 120858 1182 Locate
rps15 gene − 120958 121230 273 Locate
ycf1 gene − 121648 127179 5532 Locate
trnN-GUU gene + 127509 127580 72 Locate
trnR-ACG gene − 128083 128156 74 Locate
rrn5S gene − 128400 128520 121 Locate
rrn4.5S gene − 128776 128878 103 Locate
rrn23S gene − 128977 131787 2811 Locate
trnA-UGC gene − 131947 132823 877 Locate
trnI-GAU gene − 132888 133906 1019 Locate
rrn16S gene − 134205 135695 1491 Locate
trnV-GAC gene − 135922 135993 72 Locate
rps12 gene + 137625 138418 794 Locate
rps7 gene + 138472 138939 468 Locate
ndhB gene + 139268 141415 2148 Locate
trnL-CAA gene + 141976 142056 81 Locate
ycf15 gene − 142317 142514 198 Locate
ycf2 gene − 142656 149513 6858 Locate
trnI-CAU gene + 149602 149675 74 Locate
rpl23 gene + 149841 150122 282 Locate
rpl2 gene + 150141 151626 1486 Locate
Status Available
Accession PV870863.1
Length 151,672 bp
GC content 38.1%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources