Coordinate-aware organelle record

Salvia munzii chloroplast genome

Available PX971247.1 151,311 bp 132 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 2-75 bp · − strandpsbA · gene · 396-1,454 bp · − strandtrnK-UUU · gene · 1,681-4,259 bp · − strandmatK · gene · 1,993-3,522 bp · − strandrps16 · gene · 4,809-5,915 bp · − strandtrnQ-UUG · gene · 6,475-6,546 bp · − strandpsbK · gene · 6,927-7,112 bp · + strandpsbI · gene · 7,508-7,618 bp · + strandtrnS-GCU · gene · 7,775-7,862 bp · − strandtrnG-UCC · gene · 8,556-9,310 bp · + strandtrnR-UCU · gene · 9,491-9,562 bp · + strandatpA · gene · 9,670-11,193 bp · − strandatpF · gene · 11,295-12,537 bp · − strandatpH · gene · 12,810-13,055 bp · − strandatpI · gene · 14,082-14,825 bp · − strandrps2 · gene · 15,050-15,760 bp · − strandrpoC2 · gene · 15,962-20,149 bp · − strandrpoC1 · gene · 20,315-23,129 bp · − strandrpoB · gene · 23,156-26,368 bp · − strandtrnC-GCA · gene · 27,515-27,585 bp · + strandpetN · gene · 27,741-27,830 bp · + strandpsbM · gene · 28,827-28,931 bp · − strandtrnD-GUC · gene · 29,441-29,514 bp · − strandtrnY-GUA · gene · 29,625-29,708 bp · − strandtrnE-UUC · gene · 29,780-29,852 bp · − strandtrnT-GGU · gene · 30,411-30,482 bp · + strandpsbD · gene · 31,845-32,906 bp · + strandpsbC · gene · 32,854-34,275 bp · + strandtrnS-UGA · gene · 34,522-34,614 bp · − strandpsbZ · gene · 34,937-35,125 bp · + strandtrnG-GCC · gene · 35,403-35,473 bp · + strandtrnM-CAU · gene · 35,631-35,704 bp · − strandrps14 · gene · 35,849-36,151 bp · − strandpsaB · gene · 36,274-38,478 bp · − strandpsaA · gene · 38,504-40,756 bp · − strandycf3 · gene · 41,532-43,475 bp · − strandtrnS-GGA · gene · 44,300-44,386 bp · + strandrps4 · gene · 44,670-45,275 bp · − strandtrnT-UGU · gene · 45,632-45,704 bp · − strandtrnL-UAA · gene · 46,382-46,964 bp · + strandtrnF-GAA · gene · 47,267-47,339 bp · + strandndhJ · gene · 47,878-48,354 bp · − strandndhK · gene · 48,465-49,142 bp · − strandndhC · gene · 49,194-49,556 bp · − strandtrnV-UAC · gene · 50,503-51,143 bp · − strandtrnM-CAU · gene · 51,324-51,396 bp · + strandatpE · gene · 51,601-52,002 bp · − strandatpB · gene · 51,999-53,495 bp · − strandrbcL · gene · 54,303-55,736 bp · + strandaccD · gene · 56,441-57,922 bp · + strandpsaI · gene · 58,359-58,469 bp · + strandycf4 · gene · 58,915-59,469 bp · + strandcemA · gene · 60,119-60,808 bp · + strandpetA · gene · 61,034-61,996 bp · + strandpsbJ · gene · 63,038-63,160 bp · − strandpsbL · gene · 63,295-63,411 bp · − strandpsbF · gene · 63,435-63,554 bp · − strandpsbE · gene · 63,569-63,820 bp · − strandpetL · gene · 64,638-64,733 bp · + strandpetG · gene · 64,912-65,025 bp · + strandtrnW-CCA · gene · 65,140-65,213 bp · − strandtrnP-UGG · gene · 65,388-65,461 bp · − strandpsaJ · gene · 65,746-65,880 bp · + strandrpl33 · gene · 66,321-66,521 bp · + strandrps18 · gene · 66,699-67,004 bp · + strandrpl20 · gene · 67,237-67,623 bp · − strandrps12 · gene · 68,422-96,585 bp · − strandrps12 · gene · 68,422-138,001 bp · + strandclpP · gene · 68,659-70,569 bp · − strandpsbB · gene · 71,007-72,533 bp · + strandpsbT · gene · 72,714-72,815 bp · + strandpsbN · gene · 72,881-73,012 bp · − strandpsbH · gene · 73,118-73,339 bp · + strandpetB · gene · 73,465-74,840 bp · + strandpetD · gene · 75,028-76,218 bp · + strandrpoA · gene · 76,395-77,402 bp · − strandrps11 · gene · 77,472-77,888 bp · − strandrpl36 · gene · 77,999-78,112 bp · − strandinfA · gene · 78,212-78,445 bp · − strandrps8 · gene · 78,565-78,969 bp · − strandrpl14 · gene · 79,149-79,517 bp · − strandrpl16 · gene · 79,649-80,919 bp · − strandrps3 · gene · 81,062-81,724 bp · − strandrpl22 · gene · 81,709-82,176 bp · − strandrps19 · gene · 82,246-82,524 bp · − strandrpl2 · gene · 82,584-84,069 bp · − strandrpl23 · gene · 84,088-84,369 bp · − strandtrnI-CAU · gene · 84,535-84,608 bp · − strandycf2 · gene · 84,697-91,554 bp · + strandycf15 · gene · 91,696-91,893 bp · + strandtrnL-CAA · gene · 92,154-92,234 bp · − strandndhB · gene · 92,795-94,942 bp · − strandrps7 · gene · 95,271-95,738 bp · − strandtrnV-GAC · gene · 98,223-98,294 bp · + strandrrn16S · gene · 98,521-100,011 bp · + strandtrnI-GAU · gene · 100,310-101,328 bp · + strandtrnA-UGC · gene · 101,393-102,269 bp · + strandrrn23S · gene · 102,434-105,244 bp · + strandrrn4.5S · gene · 105,343-105,445 bp · + strandrrn5S · gene · 105,701-105,821 bp · + strandtrnR-ACG · gene · 106,065-106,138 bp · + strandtrnN-GUU · gene · 106,641-106,712 bp · − strandndhF · gene · 108,060-110,291 bp · − strandrpl32 · gene · 110,729-110,899 bp · + strandtrnL-UAG · gene · 111,636-111,715 bp · + strandccsA · gene · 111,812-112,789 bp · + strandndhD · gene · 113,001-114,542 bp · − strandpsaC · gene · 114,643-114,888 bp · − strandndhE · gene · 115,139-115,444 bp · − strandndhG · gene · 115,657-116,187 bp · − strandndhI · gene · 116,565-117,071 bp · − strandndhA · gene · 117,147-119,250 bp · − strandndhH · gene · 119,252-120,433 bp · − strandrps15 · gene · 120,533-120,805 bp · − strandycf1 · gene · 121,223-126,751 bp · − strandtrnN-GUU · gene · 127,081-127,152 bp · + strandtrnR-ACG · gene · 127,655-127,728 bp · − strandrrn5S · gene · 127,972-128,092 bp · − strandrrn4.5S · gene · 128,348-128,450 bp · − strandrrn23S · gene · 128,549-131,359 bp · − strandtrnA-UGC · gene · 131,524-132,400 bp · − strandtrnI-GAU · gene · 132,465-133,483 bp · − strandrrn16S · gene · 133,782-135,272 bp · − strandtrnV-GAC · gene · 135,499-135,570 bp · − strandrps7 · gene · 138,055-138,522 bp · + strandndhB · gene · 138,851-140,998 bp · + strandtrnL-CAA · gene · 141,559-141,639 bp · + strandycf15 · gene · 141,900-142,097 bp · − strandycf2 · gene · 142,239-149,096 bp · − strandtrnI-CAU · gene · 149,185-149,258 bp · + strandrpl23 · gene · 149,424-149,705 bp · + strandrpl2 · gene · 149,724-151,209 bp · + strandSalvia munziiANNOTATED PLASTOMEPX971247.1151,311 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PX971247.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−17574
psbAgenephotosystem-ii−39514541059
trnK-UUUgenetranslation-rna−168042592579
matKgeneother−199235221530
rps16generibosomal-protein−480859151107
trnQ-UUGgenetranslation-rna−6474654672
psbKgenephotosystem-ii+69267112186
psbIgenephotosystem-ii+75077618111
trnS-GCUgenetranslation-rna−7774786288
trnG-UCCgenetranslation-rna+85559310755
trnR-UCUgenetranslation-rna+9490956272
atpAgeneatp-synthase−9669111931524
atpFgeneatp-synthase−11294125371243
atpHgeneatp-synthase−1280913055246
atpIgeneatp-synthase−1408114825744
rps2generibosomal-protein−1504915760711
rpoC2generna-polymerase−15961201494188
rpoC1generna-polymerase−20314231292815
rpoBgenerna-polymerase−23155263683213
trnC-GCAgenetranslation-rna+275142758571
petNgenecytochrome+277402783090
psbMgenephotosystem-ii−2882628931105
trnD-GUCgenetranslation-rna−294402951474
trnY-GUAgenetranslation-rna−296242970884
trnE-UUCgenetranslation-rna−297792985273
trnT-GGUgenetranslation-rna+304103048272
psbDgenephotosystem-ii+31844329061062
psbCgenephotosystem-ii+32853342751422
trnS-UGAgenetranslation-rna−345213461493
psbZgenephotosystem-ii+3493635125189
trnG-GCCgenetranslation-rna+354023547371
trnM-CAUgenetranslation-rna−356303570474
rps14generibosomal-protein−3584836151303
psaBgenephotosystem-i−36273384782205
psaAgenephotosystem-i−38503407562253
ycf3geneother−41531434751944
trnS-GGAgenetranslation-rna+442994438687
rps4generibosomal-protein−4466945275606
trnT-UGUgenetranslation-rna−456314570473
trnL-UAAgenetranslation-rna+4638146964583
trnF-GAAgenetranslation-rna+472664733973
ndhJgenenad-dehydrogenase−4787748354477
ndhKgenenad-dehydrogenase−4846449142678
ndhCgenenad-dehydrogenase−4919349556363
trnV-UACgenetranslation-rna−5050251143641
trnM-CAUgenetranslation-rna+513235139673
atpEgeneatp-synthase−5160052002402
atpBgeneatp-synthase−51998534951497
rbcLgeneother+54302557361434
accDgeneother+56440579221482
psaIgenephotosystem-i+5835858469111
ycf4geneother+5891459469555
cemAgeneother+6011860808690
petAgenecytochrome+6103361996963
psbJgenephotosystem-ii−6303763160123
psbLgenephotosystem-ii−6329463411117
psbFgenephotosystem-ii−6343463554120
psbEgenephotosystem-ii−6356863820252
petLgenecytochrome+646376473396
petGgenecytochrome+6491165025114
trnW-CCAgenetranslation-rna−651396521374
trnP-UGGgenetranslation-rna−653876546174
psaJgenephotosystem-i+6574565880135
rpl33generibosomal-protein+6632066521201
rps18generibosomal-protein+6669867004306
rpl20generibosomal-protein−6723667623387
rps12generibosomal-protein−684219658528164
rps12generibosomal-protein+6842113800169580
clpPgeneother−68658705691911
psbBgenephotosystem-ii+71006725331527
psbTgenephotosystem-ii+7271372815102
psbNgenephotosystem-ii−7288073012132
psbHgenephotosystem-ii+7311773339222
petBgenecytochrome+73464748401376
petDgenecytochrome+75027762181191
rpoAgenerna-polymerase−76394774021008
rps11generibosomal-protein−7747177888417
rpl36generibosomal-protein−7799878112114
infAgeneother−7821178445234
rps8generibosomal-protein−7856478969405
rpl14generibosomal-protein−7914879517369
rpl16generibosomal-protein−79648809191271
rps3generibosomal-protein−8106181724663
rpl22generibosomal-protein−8170882176468
rps19generibosomal-protein−8224582524279
rpl2generibosomal-protein−82583840691486
rpl23generibosomal-protein−8408784369282
trnI-CAUgenetranslation-rna−845348460874
ycf2geneother+84696915546858
ycf15geneother+9169591893198
trnL-CAAgenetranslation-rna−921539223481
ndhBgenenad-dehydrogenase−92794949422148
rps7generibosomal-protein−9527095738468
trnV-GACgenetranslation-rna+982229829472
rrn16Sgeneribosomal-rna+985201000111491
trnI-GAUgenetranslation-rna+1003091013281019
trnA-UGCgenetranslation-rna+101392102269877
rrn23Sgeneribosomal-rna+1024331052442811
rrn4.5Sgeneribosomal-rna+105342105445103
rrn5Sgeneribosomal-rna+105700105821121
trnR-ACGgenetranslation-rna+10606410613874
trnN-GUUgenetranslation-rna−10664010671272
ndhFgenenad-dehydrogenase−1080591102912232
rpl32generibosomal-protein+110728110899171
trnL-UAGgenetranslation-rna+11163511171580
ccsAgeneother+111811112789978
ndhDgenenad-dehydrogenase−1130001145421542
psaCgenephotosystem-i−114642114888246
ndhEgenenad-dehydrogenase−115138115444306
ndhGgenenad-dehydrogenase−115656116187531
ndhIgenenad-dehydrogenase−116564117071507
ndhAgenenad-dehydrogenase−1171461192502104
ndhHgenenad-dehydrogenase−1192511204331182
rps15generibosomal-protein−120532120805273
ycf1geneother−1212221267515529
trnN-GUUgenetranslation-rna+12708012715272
trnR-ACGgenetranslation-rna−12765412772874
rrn5Sgeneribosomal-rna−127971128092121
rrn4.5Sgeneribosomal-rna−128347128450103
rrn23Sgeneribosomal-rna−1285481313592811
trnA-UGCgenetranslation-rna−131523132400877
trnI-GAUgenetranslation-rna−1324641334831019
rrn16Sgeneribosomal-rna−1337811352721491
trnV-GACgenetranslation-rna−13549813557072
rps7generibosomal-protein+138054138522468
ndhBgenenad-dehydrogenase+1388501409982148
trnL-CAAgenetranslation-rna+14155814163981
ycf15geneother−141899142097198
ycf2geneother−1422381490966858
trnI-CAUgenetranslation-rna+14918414925874
rpl23generibosomal-protein+149423149705282
rpl2generibosomal-protein+1497231512091486

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources