Salvia officinalis subsp. gallica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870864.1 · 5–78 bp · −
psbA · PV870864.1 · 408–1,466 bp · −
trnK-UUU · PV870864.1 · 1,698–4,286 bp · −
matK · PV870864.1 · 2,018–3,547 bp · −
rps16 · PV870864.1 · 4,860–5,969 bp · −
trnQ-UUG · PV870864.1 · 6,523–6,594 bp · −
trnS-GCU · PV870864.1 · 7,818–7,905 bp · −
atpA · PV870864.1 · 9,725–11,248 bp · −
atpF · PV870864.1 · 11,343–12,601 bp · −
atpH · PV870864.1 · 12,881–13,126 bp · −
atpI · PV870864.1 · 14,160–14,903 bp · −
rps2 · PV870864.1 · 15,127–15,837 bp · −
rpoC2 · PV870864.1 · 16,047–20,228 bp · −
rpoC1 · PV870864.1 · 20,393–23,209 bp · −
rpoB · PV870864.1 · 23,236–26,448 bp · −
psbM · PV870864.1 · 28,855–28,959 bp · −
trnD-GUC · PV870864.1 · 29,478–29,551 bp · −
trnY-GUA · PV870864.1 · 29,662–29,745 bp · −
trnE-UUC · PV870864.1 · 29,816–29,888 bp · −
trnS-UGA · PV870864.1 · 34,554–34,645 bp · −
trnfM-CAU · PV870864.1 · 35,701–35,774 bp · −
rps14 · PV870864.1 · 35,933–36,235 bp · −
psaB · PV870864.1 · 36,358–38,562 bp · −
psaA · PV870864.1 · 38,588–40,840 bp · −
ycf3 · PV870864.1 · 41,634–43,584 bp · −
rps4 · PV870864.1 · 44,482–45,087 bp · −
trnT-UGU · PV870864.1 · 45,434–45,506 bp · −
ndhJ · PV870864.1 · 47,781–48,257 bp · −
ndhK · PV870864.1 · 48,368–49,045 bp · −
ndhC · PV870864.1 · 49,097–49,459 bp · −
trnV-UAC · PV870864.1 · 50,419–51,066 bp · −
atpE · PV870864.1 · 51,530–51,931 bp · −
atpB · PV870864.1 · 51,928–53,424 bp · −
psbJ · PV870864.1 · 62,893–63,015 bp · −
psbL · PV870864.1 · 63,145–63,261 bp · −
psbF · PV870864.1 · 63,285–63,404 bp · −
psbE · PV870864.1 · 63,419–63,670 bp · −
trnW-CCA · PV870864.1 · 65,068–65,141 bp · −
trnP-UGG · PV870864.1 · 65,318–65,391 bp · −
rpl20 · PV870864.1 · 67,164–67,550 bp · −
rps12 · PV870864.1 · 68,348–68,461 bp · −
rps12 · PV870864.1 · 95,704–96,497 bp · −
clpP · PV870864.1 · 68,584–70,499 bp · −
psbN · PV870864.1 · 72,830–72,961 bp · −
rpoA · PV870864.1 · 76,341–77,348 bp · −
rps11 · PV870864.1 · 77,419–77,835 bp · −
rpl36 · PV870864.1 · 77,945–78,058 bp · −
infA · PV870864.1 · 78,154–78,387 bp · −
rps8 · PV870864.1 · 78,508–78,912 bp · −
rpl14 · PV870864.1 · 79,091–79,459 bp · −
rpl16 · PV870864.1 · 79,589–80,858 bp · −
rps3 · PV870864.1 · 81,001–81,663 bp · −
rpl22 · PV870864.1 · 81,648–82,115 bp · −
rps19 · PV870864.1 · 82,185–82,463 bp · −
rpl2 · PV870864.1 · 82,523–84,010 bp · −
rpl23 · PV870864.1 · 84,029–84,310 bp · −
trnI-CAU · PV870864.1 · 84,476–84,549 bp · −
trnL-CAA · PV870864.1 · 92,068–92,148 bp · −
ndhB · PV870864.1 · 92,701–94,908 bp · −
rps7 · PV870864.1 · 95,183–95,650 bp · −
trnN-GUU · PV870864.1 · 106,559–106,630 bp · −
ndhF · PV870864.1 · 107,984–110,221 bp · −
ndhD · PV870864.1 · 112,923–114,464 bp · −
psaC · PV870864.1 · 114,553–114,798 bp · −
ndhE · PV870864.1 · 115,049–115,354 bp · −
ndhG · PV870864.1 · 115,534–116,064 bp · −
ndhI · PV870864.1 · 116,440–116,946 bp · −
ndhA · PV870864.1 · 117,027–119,125 bp · −
ndhH · PV870864.1 · 119,127–120,308 bp · −
rps15 · PV870864.1 · 120,408–120,680 bp · −
ycf1 · PV870864.1 · 121,063–126,594 bp · −
trnR-ACG · PV870864.1 · 127,520–127,593 bp · −
rrn5S · PV870864.1 · 127,837–127,957 bp · −
rrn4.5S · PV870864.1 · 128,207–128,309 bp · −
rrn23S · PV870864.1 · 128,408–131,218 bp · −
trnA-UGC · PV870864.1 · 131,394–132,271 bp · −
trnI-GAU · PV870864.1 · 132,336–133,354 bp · −
rrn16S · PV870864.1 · 133,653–135,143 bp · −
trnV-GAC · PV870864.1 · 135,370–135,441 bp · −
ycf15 · PV870864.1 · 141,747–141,944 bp · −
ycf2 · PV870864.1 · 142,086–148,916 bp · −
psbK · PV870864.1 · 6,973–7,152 bp · +
psbI · PV870864.1 · 7,552–7,662 bp · +
trnG-UCC · PV870864.1 · 8,613–9,367 bp · +
trnR-UCU · PV870864.1 · 9,547–9,618 bp · +
trnC-GCA · PV870864.1 · 27,585–27,655 bp · +
petN · PV870864.1 · 27,819–27,908 bp · +
trnT-GGU · PV870864.1 · 30,456–30,527 bp · +
psbD · PV870864.1 · 31,878–32,939 bp · +
psbC · PV870864.1 · 32,887–34,308 bp · +
psbZ · PV870864.1 · 34,991–35,179 bp · +
trnG-GCC · PV870864.1 · 35,457–35,527 bp · +
trnS-GGA · PV870864.1 · 44,138–44,224 bp · +
trnL-UAA · PV870864.1 · 46,186–46,756 bp · +
trnF-GAA · PV870864.1 · 47,040–47,112 bp · +
trnM-CAU · PV870864.1 · 51,247–51,319 bp · +
rbcL · PV870864.1 · 54,216–55,676 bp · +
accD · PV870864.1 · 56,351–57,832 bp · +
psaI · PV870864.1 · 58,300–58,410 bp · +
ycf4 · PV870864.1 · 58,843–59,397 bp · +
cemA · PV870864.1 · 60,054–60,743 bp · +
petA · PV870864.1 · 60,951–61,913 bp · +
petL · PV870864.1 · 64,564–64,659 bp · +
petG · PV870864.1 · 64,839–64,952 bp · +
psaJ · PV870864.1 · 65,669–65,803 bp · +
rpl33 · PV870864.1 · 66,255–66,455 bp · +
rps18 · PV870864.1 · 66,626–66,931 bp · +
rps12 · PV870864.1 · 137,057–137,850 bp · +
psbB · PV870864.1 · 70,953–72,479 bp · +
psbT · PV870864.1 · 72,662–72,769 bp · +
psbH · PV870864.1 · 73,067–73,288 bp · +
petB · PV870864.1 · 73,414–74,790 bp · +
petD · PV870864.1 · 74,974–76,164 bp · +
ycf2 · PV870864.1 · 84,638–91,468 bp · +
ycf15 · PV870864.1 · 91,610–91,807 bp · +
trnV-GAC · PV870864.1 · 98,113–98,184 bp · +
rrn16S · PV870864.1 · 98,411–99,901 bp · +
trnI-GAU · PV870864.1 · 100,200–101,218 bp · +
trnA-UGC · PV870864.1 · 101,283–102,160 bp · +
rrn23S · PV870864.1 · 102,336–105,146 bp · +
rrn4.5S · PV870864.1 · 105,245–105,347 bp · +
rrn5S · PV870864.1 · 105,597–105,717 bp · +
trnR-ACG · PV870864.1 · 105,961–106,034 bp · +
rpl32 · PV870864.1 · 110,668–110,829 bp · +
trnL-UAG · PV870864.1 · 111,541–111,620 bp · +
ccsA · PV870864.1 · 111,717–112,688 bp · +
trnN-GUU · PV870864.1 · 126,924–126,995 bp · +
rps7 · PV870864.1 · 137,904–138,371 bp · +
ndhB · PV870864.1 · 138,646–140,853 bp · +
trnL-CAA · PV870864.1 · 141,406–141,486 bp · +
trnI-CAU · PV870864.1 · 149,005–149,078 bp · +
rpl23 · PV870864.1 · 149,244–149,525 bp · +
rpl2 · PV870864.1 · 149,544–151,031 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia officinalis subsp. gallica
ANNOTATED PLASTOME
PV870864.1
151,133 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37783 75566 113350 151133 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 5 78 74 Locate
psbA gene − 408 1466 1059 Locate
trnK-UUU gene − 1698 4286 2589 Locate
matK gene − 2018 3547 1530 Locate
rps16 gene − 4860 5969 1110 Locate
trnQ-UUG gene − 6523 6594 72 Locate
psbK gene + 6973 7152 180 Locate
psbI gene + 7552 7662 111 Locate
trnS-GCU gene − 7818 7905 88 Locate
trnG-UCC gene + 8613 9367 755 Locate
trnR-UCU gene + 9547 9618 72 Locate
atpA gene − 9725 11248 1524 Locate
atpF gene − 11343 12601 1259 Locate
atpH gene − 12881 13126 246 Locate
atpI gene − 14160 14903 744 Locate
rps2 gene − 15127 15837 711 Locate
rpoC2 gene − 16047 20228 4182 Locate
rpoC1 gene − 20393 23209 2817 Locate
rpoB gene − 23236 26448 3213 Locate
trnC-GCA gene + 27585 27655 71 Locate
petN gene + 27819 27908 90 Locate
psbM gene − 28855 28959 105 Locate
trnD-GUC gene − 29478 29551 74 Locate
trnY-GUA gene − 29662 29745 84 Locate
trnE-UUC gene − 29816 29888 73 Locate
trnT-GGU gene + 30456 30527 72 Locate
psbD gene + 31878 32939 1062 Locate
psbC gene + 32887 34308 1422 Locate
trnS-UGA gene − 34554 34645 92 Locate
psbZ gene + 34991 35179 189 Locate
trnG-GCC gene + 35457 35527 71 Locate
trnfM-CAU gene − 35701 35774 74 Locate
rps14 gene − 35933 36235 303 Locate
psaB gene − 36358 38562 2205 Locate
psaA gene − 38588 40840 2253 Locate
ycf3 gene − 41634 43584 1951 Locate
trnS-GGA gene + 44138 44224 87 Locate
rps4 gene − 44482 45087 606 Locate
trnT-UGU gene − 45434 45506 73 Locate
trnL-UAA gene + 46186 46756 571 Locate
trnF-GAA gene + 47040 47112 73 Locate
ndhJ gene − 47781 48257 477 Locate
ndhK gene − 48368 49045 678 Locate
ndhC gene − 49097 49459 363 Locate
trnV-UAC gene − 50419 51066 648 Locate
trnM-CAU gene + 51247 51319 73 Locate
atpE gene − 51530 51931 402 Locate
atpB gene − 51928 53424 1497 Locate
rbcL gene + 54216 55676 1461 Locate
accD gene + 56351 57832 1482 Locate
psaI gene + 58300 58410 111 Locate
ycf4 gene + 58843 59397 555 Locate
cemA gene + 60054 60743 690 Locate
petA gene + 60951 61913 963 Locate
psbJ gene − 62893 63015 123 Locate
psbL gene − 63145 63261 117 Locate
psbF gene − 63285 63404 120 Locate
psbE gene − 63419 63670 252 Locate
petL gene + 64564 64659 96 Locate
petG gene + 64839 64952 114 Locate
trnW-CCA gene − 65068 65141 74 Locate
trnP-UGG gene − 65318 65391 74 Locate
psaJ gene + 65669 65803 135 Locate
rpl33 gene + 66255 66455 201 Locate
rps18 gene + 66626 66931 306 Locate
rpl20 gene − 67164 67550 387 Locate
rps12 gene − 68348 68461 114 Locate
clpP gene − 68584 70499 1916 Locate
psbB gene + 70953 72479 1527 Locate
psbT gene + 72662 72769 108 Locate
psbN gene − 72830 72961 132 Locate
psbH gene + 73067 73288 222 Locate
petB gene + 73414 74790 1377 Locate
petD gene + 74974 76164 1191 Locate
rpoA gene − 76341 77348 1008 Locate
rps11 gene − 77419 77835 417 Locate
rpl36 gene − 77945 78058 114 Locate
infA gene − 78154 78387 234 Locate
rps8 gene − 78508 78912 405 Locate
rpl14 gene − 79091 79459 369 Locate
rpl16 gene − 79589 80858 1270 Locate
rps3 gene − 81001 81663 663 Locate
rpl22 gene − 81648 82115 468 Locate
rps19 gene − 82185 82463 279 Locate
rpl2 gene − 82523 84010 1488 Locate
rpl23 gene − 84029 84310 282 Locate
trnI-CAU gene − 84476 84549 74 Locate
ycf2 gene + 84638 91468 6831 Locate
ycf15 gene + 91610 91807 198 Locate
trnL-CAA gene − 92068 92148 81 Locate
ndhB gene − 92701 94908 2208 Locate
rps7 gene − 95183 95650 468 Locate
rps12 gene − 95704 96497 794 Locate
trnV-GAC gene + 98113 98184 72 Locate
rrn16S gene + 98411 99901 1491 Locate
trnI-GAU gene + 100200 101218 1019 Locate
trnA-UGC gene + 101283 102160 878 Locate
rrn23S gene + 102336 105146 2811 Locate
rrn4.5S gene + 105245 105347 103 Locate
rrn5S gene + 105597 105717 121 Locate
trnR-ACG gene + 105961 106034 74 Locate
trnN-GUU gene − 106559 106630 72 Locate
ndhF gene − 107984 110221 2238 Locate
rpl32 gene + 110668 110829 162 Locate
trnL-UAG gene + 111541 111620 80 Locate
ccsA gene + 111717 112688 972 Locate
ndhD gene − 112923 114464 1542 Locate
psaC gene − 114553 114798 246 Locate
ndhE gene − 115049 115354 306 Locate
ndhG gene − 115534 116064 531 Locate
ndhI gene − 116440 116946 507 Locate
ndhA gene − 117027 119125 2099 Locate
ndhH gene − 119127 120308 1182 Locate
rps15 gene − 120408 120680 273 Locate
ycf1 gene − 121063 126594 5532 Locate
trnN-GUU gene + 126924 126995 72 Locate
trnR-ACG gene − 127520 127593 74 Locate
rrn5S gene − 127837 127957 121 Locate
rrn4.5S gene − 128207 128309 103 Locate
rrn23S gene − 128408 131218 2811 Locate
trnA-UGC gene − 131394 132271 878 Locate
trnI-GAU gene − 132336 133354 1019 Locate
rrn16S gene − 133653 135143 1491 Locate
trnV-GAC gene − 135370 135441 72 Locate
rps12 gene + 137057 137850 794 Locate
rps7 gene + 137904 138371 468 Locate
ndhB gene + 138646 140853 2208 Locate
trnL-CAA gene + 141406 141486 81 Locate
ycf15 gene − 141747 141944 198 Locate
ycf2 gene − 142086 148916 6831 Locate
trnI-CAU gene + 149005 149078 74 Locate
rpl23 gene + 149244 149525 282 Locate
rpl2 gene + 149544 151031 1488 Locate
Status Available
Accession PV870864.1
Length 151,133 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources