Coordinate-aware organelle record

Salvia officinalis subsp. gallica chloroplast genome

Available PV870864.1 151,133 bp 132 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 5-78 bp · − strandpsbA · gene · 408-1,466 bp · − strandtrnK-UUU · gene · 1,698-4,286 bp · − strandmatK · gene · 2,018-3,547 bp · − strandrps16 · gene · 4,860-5,969 bp · − strandtrnQ-UUG · gene · 6,523-6,594 bp · − strandpsbK · gene · 6,973-7,152 bp · + strandpsbI · gene · 7,552-7,662 bp · + strandtrnS-GCU · gene · 7,818-7,905 bp · − strandtrnG-UCC · gene · 8,613-9,367 bp · + strandtrnR-UCU · gene · 9,547-9,618 bp · + strandatpA · gene · 9,725-11,248 bp · − strandatpF · gene · 11,343-12,601 bp · − strandatpH · gene · 12,881-13,126 bp · − strandatpI · gene · 14,160-14,903 bp · − strandrps2 · gene · 15,127-15,837 bp · − strandrpoC2 · gene · 16,047-20,228 bp · − strandrpoC1 · gene · 20,393-23,209 bp · − strandrpoB · gene · 23,236-26,448 bp · − strandtrnC-GCA · gene · 27,585-27,655 bp · + strandpetN · gene · 27,819-27,908 bp · + strandpsbM · gene · 28,855-28,959 bp · − strandtrnD-GUC · gene · 29,478-29,551 bp · − strandtrnY-GUA · gene · 29,662-29,745 bp · − strandtrnE-UUC · gene · 29,816-29,888 bp · − strandtrnT-GGU · gene · 30,456-30,527 bp · + strandpsbD · gene · 31,878-32,939 bp · + strandpsbC · gene · 32,887-34,308 bp · + strandtrnS-UGA · gene · 34,554-34,645 bp · − strandpsbZ · gene · 34,991-35,179 bp · + strandtrnG-GCC · gene · 35,457-35,527 bp · + strandtrnfM-CAU · gene · 35,701-35,774 bp · − strandrps14 · gene · 35,933-36,235 bp · − strandpsaB · gene · 36,358-38,562 bp · − strandpsaA · gene · 38,588-40,840 bp · − strandycf3 · gene · 41,634-43,584 bp · − strandtrnS-GGA · gene · 44,138-44,224 bp · + strandrps4 · gene · 44,482-45,087 bp · − strandtrnT-UGU · gene · 45,434-45,506 bp · − strandtrnL-UAA · gene · 46,186-46,756 bp · + strandtrnF-GAA · gene · 47,040-47,112 bp · + strandndhJ · gene · 47,781-48,257 bp · − strandndhK · gene · 48,368-49,045 bp · − strandndhC · gene · 49,097-49,459 bp · − strandtrnV-UAC · gene · 50,419-51,066 bp · − strandtrnM-CAU · gene · 51,247-51,319 bp · + strandatpE · gene · 51,530-51,931 bp · − strandatpB · gene · 51,928-53,424 bp · − strandrbcL · gene · 54,216-55,676 bp · + strandaccD · gene · 56,351-57,832 bp · + strandpsaI · gene · 58,300-58,410 bp · + strandycf4 · gene · 58,843-59,397 bp · + strandcemA · gene · 60,054-60,743 bp · + strandpetA · gene · 60,951-61,913 bp · + strandpsbJ · gene · 62,893-63,015 bp · − strandpsbL · gene · 63,145-63,261 bp · − strandpsbF · gene · 63,285-63,404 bp · − strandpsbE · gene · 63,419-63,670 bp · − strandpetL · gene · 64,564-64,659 bp · + strandpetG · gene · 64,839-64,952 bp · + strandtrnW-CCA · gene · 65,068-65,141 bp · − strandtrnP-UGG · gene · 65,318-65,391 bp · − strandpsaJ · gene · 65,669-65,803 bp · + strandrpl33 · gene · 66,255-66,455 bp · + strandrps18 · gene · 66,626-66,931 bp · + strandrpl20 · gene · 67,164-67,550 bp · − strandrps12 · gene · 68,348-96,497 bp · − strandrps12 · gene · 68,348-137,850 bp · + strandclpP · gene · 68,584-70,499 bp · − strandpsbB · gene · 70,953-72,479 bp · + strandpsbT · gene · 72,662-72,769 bp · + strandpsbN · gene · 72,830-72,961 bp · − strandpsbH · gene · 73,067-73,288 bp · + strandpetB · gene · 73,414-74,790 bp · + strandpetD · gene · 74,974-76,164 bp · + strandrpoA · gene · 76,341-77,348 bp · − strandrps11 · gene · 77,419-77,835 bp · − strandrpl36 · gene · 77,945-78,058 bp · − strandinfA · gene · 78,154-78,387 bp · − strandrps8 · gene · 78,508-78,912 bp · − strandrpl14 · gene · 79,091-79,459 bp · − strandrpl16 · gene · 79,589-80,858 bp · − strandrps3 · gene · 81,001-81,663 bp · − strandrpl22 · gene · 81,648-82,115 bp · − strandrps19 · gene · 82,185-82,463 bp · − strandrpl2 · gene · 82,523-84,010 bp · − strandrpl23 · gene · 84,029-84,310 bp · − strandtrnI-CAU · gene · 84,476-84,549 bp · − strandycf2 · gene · 84,638-91,468 bp · + strandycf15 · gene · 91,610-91,807 bp · + strandtrnL-CAA · gene · 92,068-92,148 bp · − strandndhB · gene · 92,701-94,908 bp · − strandrps7 · gene · 95,183-95,650 bp · − strandtrnV-GAC · gene · 98,113-98,184 bp · + strandrrn16S · gene · 98,411-99,901 bp · + strandtrnI-GAU · gene · 100,200-101,218 bp · + strandtrnA-UGC · gene · 101,283-102,160 bp · + strandrrn23S · gene · 102,336-105,146 bp · + strandrrn4.5S · gene · 105,245-105,347 bp · + strandrrn5S · gene · 105,597-105,717 bp · + strandtrnR-ACG · gene · 105,961-106,034 bp · + strandtrnN-GUU · gene · 106,559-106,630 bp · − strandndhF · gene · 107,984-110,221 bp · − strandrpl32 · gene · 110,668-110,829 bp · + strandtrnL-UAG · gene · 111,541-111,620 bp · + strandccsA · gene · 111,717-112,688 bp · + strandndhD · gene · 112,923-114,464 bp · − strandpsaC · gene · 114,553-114,798 bp · − strandndhE · gene · 115,049-115,354 bp · − strandndhG · gene · 115,534-116,064 bp · − strandndhI · gene · 116,440-116,946 bp · − strandndhA · gene · 117,027-119,125 bp · − strandndhH · gene · 119,127-120,308 bp · − strandrps15 · gene · 120,408-120,680 bp · − strandycf1 · gene · 121,063-126,594 bp · − strandtrnN-GUU · gene · 126,924-126,995 bp · + strandtrnR-ACG · gene · 127,520-127,593 bp · − strandrrn5S · gene · 127,837-127,957 bp · − strandrrn4.5S · gene · 128,207-128,309 bp · − strandrrn23S · gene · 128,408-131,218 bp · − strandtrnA-UGC · gene · 131,394-132,271 bp · − strandtrnI-GAU · gene · 132,336-133,354 bp · − strandrrn16S · gene · 133,653-135,143 bp · − strandtrnV-GAC · gene · 135,370-135,441 bp · − strandrps7 · gene · 137,904-138,371 bp · + strandndhB · gene · 138,646-140,853 bp · + strandtrnL-CAA · gene · 141,406-141,486 bp · + strandycf15 · gene · 141,747-141,944 bp · − strandycf2 · gene · 142,086-148,916 bp · − strandtrnI-CAU · gene · 149,005-149,078 bp · + strandrpl23 · gene · 149,244-149,525 bp · + strandrpl2 · gene · 149,544-151,031 bp · + strandSalvia officinalis subsp. gallicaANNOTATED PLASTOMEPV870864.1151,133 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: PV870864.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−47874
psbAgenephotosystem-ii−40714661059
trnK-UUUgenetranslation-rna−169742862589
matKgeneother−201735471530
rps16generibosomal-protein−485959691110
trnQ-UUGgenetranslation-rna−6522659472
psbKgenephotosystem-ii+69727152180
psbIgenephotosystem-ii+75517662111
trnS-GCUgenetranslation-rna−7817790588
trnG-UCCgenetranslation-rna+86129367755
trnR-UCUgenetranslation-rna+9546961872
atpAgeneatp-synthase−9724112481524
atpFgeneatp-synthase−11342126011259
atpHgeneatp-synthase−1288013126246
atpIgeneatp-synthase−1415914903744
rps2generibosomal-protein−1512615837711
rpoC2generna-polymerase−16046202284182
rpoC1generna-polymerase−20392232092817
rpoBgenerna-polymerase−23235264483213
trnC-GCAgenetranslation-rna+275842765571
petNgenecytochrome+278182790890
psbMgenephotosystem-ii−2885428959105
trnD-GUCgenetranslation-rna−294772955174
trnY-GUAgenetranslation-rna−296612974584
trnE-UUCgenetranslation-rna−298152988873
trnT-GGUgenetranslation-rna+304553052772
psbDgenephotosystem-ii+31877329391062
psbCgenephotosystem-ii+32886343081422
trnS-UGAgenetranslation-rna−345533464592
psbZgenephotosystem-ii+3499035179189
trnG-GCCgenetranslation-rna+354563552771
trnfM-CAUgenetranslation-rna−357003577474
rps14generibosomal-protein−3593236235303
psaBgenephotosystem-i−36357385622205
psaAgenephotosystem-i−38587408402253
ycf3geneother−41633435841951
trnS-GGAgenetranslation-rna+441374422487
rps4generibosomal-protein−4448145087606
trnT-UGUgenetranslation-rna−454334550673
trnL-UAAgenetranslation-rna+4618546756571
trnF-GAAgenetranslation-rna+470394711273
ndhJgenenad-dehydrogenase−4778048257477
ndhKgenenad-dehydrogenase−4836749045678
ndhCgenenad-dehydrogenase−4909649459363
trnV-UACgenetranslation-rna−5041851066648
trnM-CAUgenetranslation-rna+512465131973
atpEgeneatp-synthase−5152951931402
atpBgeneatp-synthase−51927534241497
rbcLgeneother+54215556761461
accDgeneother+56350578321482
psaIgenephotosystem-i+5829958410111
ycf4geneother+5884259397555
cemAgeneother+6005360743690
petAgenecytochrome+6095061913963
psbJgenephotosystem-ii−6289263015123
psbLgenephotosystem-ii−6314463261117
psbFgenephotosystem-ii−6328463404120
psbEgenephotosystem-ii−6341863670252
petLgenecytochrome+645636465996
petGgenecytochrome+6483864952114
trnW-CCAgenetranslation-rna−650676514174
trnP-UGGgenetranslation-rna−653176539174
psaJgenephotosystem-i+6566865803135
rpl33generibosomal-protein+6625466455201
rps18generibosomal-protein+6662566931306
rpl20generibosomal-protein−6716367550387
rps12generibosomal-protein−683479649728150
rps12generibosomal-protein+6834713785069503
clpPgeneother−68583704991916
psbBgenephotosystem-ii+70952724791527
psbTgenephotosystem-ii+7266172769108
psbNgenephotosystem-ii−7282972961132
psbHgenephotosystem-ii+7306673288222
petBgenecytochrome+73413747901377
petDgenecytochrome+74973761641191
rpoAgenerna-polymerase−76340773481008
rps11generibosomal-protein−7741877835417
rpl36generibosomal-protein−7794478058114
infAgeneother−7815378387234
rps8generibosomal-protein−7850778912405
rpl14generibosomal-protein−7909079459369
rpl16generibosomal-protein−79588808581270
rps3generibosomal-protein−8100081663663
rpl22generibosomal-protein−8164782115468
rps19generibosomal-protein−8218482463279
rpl2generibosomal-protein−82522840101488
rpl23generibosomal-protein−8402884310282
trnI-CAUgenetranslation-rna−844758454974
ycf2geneother+84637914686831
ycf15geneother+9160991807198
trnL-CAAgenetranslation-rna−920679214881
ndhBgenenad-dehydrogenase−92700949082208
rps7generibosomal-protein−9518295650468
trnV-GACgenetranslation-rna+981129818472
rrn16Sgeneribosomal-rna+98410999011491
trnI-GAUgenetranslation-rna+1001991012181019
trnA-UGCgenetranslation-rna+101282102160878
rrn23Sgeneribosomal-rna+1023351051462811
rrn4.5Sgeneribosomal-rna+105244105347103
rrn5Sgeneribosomal-rna+105596105717121
trnR-ACGgenetranslation-rna+10596010603474
trnN-GUUgenetranslation-rna−10655810663072
ndhFgenenad-dehydrogenase−1079831102212238
rpl32generibosomal-protein+110667110829162
trnL-UAGgenetranslation-rna+11154011162080
ccsAgeneother+111716112688972
ndhDgenenad-dehydrogenase−1129221144641542
psaCgenephotosystem-i−114552114798246
ndhEgenenad-dehydrogenase−115048115354306
ndhGgenenad-dehydrogenase−115533116064531
ndhIgenenad-dehydrogenase−116439116946507
ndhAgenenad-dehydrogenase−1170261191252099
ndhHgenenad-dehydrogenase−1191261203081182
rps15generibosomal-protein−120407120680273
ycf1geneother−1210621265945532
trnN-GUUgenetranslation-rna+12692312699572
trnR-ACGgenetranslation-rna−12751912759374
rrn5Sgeneribosomal-rna−127836127957121
rrn4.5Sgeneribosomal-rna−128206128309103
rrn23Sgeneribosomal-rna−1284071312182811
trnA-UGCgenetranslation-rna−131393132271878
trnI-GAUgenetranslation-rna−1323351333541019
rrn16Sgeneribosomal-rna−1336521351431491
trnV-GACgenetranslation-rna−13536913544172
rps7generibosomal-protein+137903138371468
ndhBgenenad-dehydrogenase+1386451408532208
trnL-CAAgenetranslation-rna+14140514148681
ycf15geneother−141746141944198
ycf2geneother−1420851489166831
trnI-CAUgenetranslation-rna+14900414907874
rpl23generibosomal-protein+149243149525282
rpl2generibosomal-protein+1495431510311488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources