Salvia omeiana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX971248.1 · 11–84 bp · −
psbA · PX971248.1 · 393–1,451 bp · −
trnK-UUU · PX971248.1 · 1,683–4,271 bp · −
matK · PX971248.1 · 1,982–3,544 bp · −
rps16 · PX971248.1 · 4,837–5,946 bp · −
trnQ-UUG · PX971248.1 · 6,519–6,590 bp · −
trnS-GCU · PX971248.1 · 7,812–7,899 bp · −
atpA · PX971248.1 · 9,696–11,219 bp · −
atpF · PX971248.1 · 11,316–12,561 bp · −
atpH · PX971248.1 · 12,827–13,072 bp · −
atpI · PX971248.1 · 14,055–14,798 bp · −
rps2 · PX971248.1 · 15,023–15,733 bp · −
rpoC2 · PX971248.1 · 15,942–20,129 bp · −
rpoC1 · PX971248.1 · 20,287–23,107 bp · −
rpoB · PX971248.1 · 23,134–26,346 bp · −
psbM · PX971248.1 · 28,791–28,895 bp · −
trnD-GUC · PX971248.1 · 29,422–29,495 bp · −
trnY-GUA · PX971248.1 · 29,606–29,689 bp · −
trnE-UUC · PX971248.1 · 29,763–29,835 bp · −
trnS-UGA · PX971248.1 · 34,498–34,590 bp · −
trnM-CAU · PX971248.1 · 35,631–35,704 bp · −
rps14 · PX971248.1 · 35,849–36,151 bp · −
psaB · PX971248.1 · 36,274–38,478 bp · −
psaA · PX971248.1 · 38,504–40,756 bp · −
ycf3 · PX971248.1 · 41,525–43,468 bp · −
rps4 · PX971248.1 · 44,656–45,261 bp · −
trnT-UGU · PX971248.1 · 45,613–45,685 bp · −
ndhJ · PX971248.1 · 47,809–48,285 bp · −
ndhK · PX971248.1 · 48,396–49,073 bp · −
ndhC · PX971248.1 · 49,125–49,487 bp · −
trnV-UAC · PX971248.1 · 50,432–51,080 bp · −
atpE · PX971248.1 · 51,552–51,953 bp · −
atpB · PX971248.1 · 51,950–53,446 bp · −
psbJ · PX971248.1 · 62,954–63,076 bp · −
psbL · PX971248.1 · 63,210–63,326 bp · −
psbF · PX971248.1 · 63,350–63,469 bp · −
psbE · PX971248.1 · 63,484–63,735 bp · −
trnW-CCA · PX971248.1 · 65,013–65,086 bp · −
trnP-UGG · PX971248.1 · 65,265–65,338 bp · −
rpl20 · PX971248.1 · 67,118–67,504 bp · −
rps12 · PX971248.1 · 68,302–68,415 bp · −
rps12 · PX971248.1 · 95,694–96,487 bp · −
clpP · PX971248.1 · 68,540–70,470 bp · −
psbN · PX971248.1 · 72,793–72,924 bp · −
rpoA · PX971248.1 · 76,301–77,308 bp · −
rps11 · PX971248.1 · 77,380–77,796 bp · −
rpl36 · PX971248.1 · 77,906–78,019 bp · −
infA · PX971248.1 · 78,115–78,348 bp · −
rps8 · PX971248.1 · 78,475–78,879 bp · −
rpl14 · PX971248.1 · 79,063–79,431 bp · −
rpl16 · PX971248.1 · 79,563–80,841 bp · −
rps3 · PX971248.1 · 80,977–81,639 bp · −
rpl22 · PX971248.1 · 81,624–82,091 bp · −
rps19 · PX971248.1 · 82,161–82,439 bp · −
rpl2 · PX971248.1 · 82,499–83,981 bp · −
rpl23 · PX971248.1 · 84,000–84,281 bp · −
trnI-CAU · PX971248.1 · 84,447–84,520 bp · −
trnL-CAA · PX971248.1 · 92,051–92,131 bp · −
ndhB · PX971248.1 · 92,691–94,844 bp · −
rps7 · PX971248.1 · 95,173–95,640 bp · −
trnN-GUU · PX971248.1 · 106,537–106,608 bp · −
ndhF · PX971248.1 · 107,962–110,178 bp · −
ndhD · PX971248.1 · 112,902–114,443 bp · −
psaC · PX971248.1 · 114,538–114,783 bp · −
ndhE · PX971248.1 · 115,034–115,339 bp · −
ndhG · PX971248.1 · 115,560–116,090 bp · −
ndhI · PX971248.1 · 116,477–116,983 bp · −
ndhA · PX971248.1 · 117,064–119,164 bp · −
ndhH · PX971248.1 · 119,166–120,347 bp · −
rps15 · PX971248.1 · 120,447–120,719 bp · −
ycf1 · PX971248.1 · 121,143–126,677 bp · −
trnR-ACG · PX971248.1 · 127,603–127,676 bp · −
rrn5S · PX971248.1 · 127,920–128,040 bp · −
rrn4.5S · PX971248.1 · 128,296–128,398 bp · −
rrn23S · PX971248.1 · 128,497–131,307 bp · −
trnA-UGC · PX971248.1 · 131,473–132,349 bp · −
trnI-GAU · PX971248.1 · 132,414–133,426 bp · −
rrn16S · PX971248.1 · 133,725–135,215 bp · −
trnV-GAC · PX971248.1 · 135,442–135,513 bp · −
ycf15 · PX971248.1 · 141,825–142,022 bp · −
ycf2 · PX971248.1 · 142,164–149,006 bp · −
psbK · PX971248.1 · 6,981–7,160 bp · +
psbI · PX971248.1 · 7,557–7,667 bp · +
trnG-UCC · PX971248.1 · 8,584–9,336 bp · +
trnR-UCU · PX971248.1 · 9,518–9,589 bp · +
trnC-GCA · PX971248.1 · 27,500–27,570 bp · +
petN · PX971248.1 · 27,734–27,823 bp · +
trnT-GGU · PX971248.1 · 30,378–30,449 bp · +
psbD · PX971248.1 · 31,822–32,883 bp · +
psbC · PX971248.1 · 32,831–34,252 bp · +
psbZ · PX971248.1 · 34,925–35,113 bp · +
trnG-GCC · PX971248.1 · 35,386–35,456 bp · +
trnS-GGA · PX971248.1 · 44,293–44,379 bp · +
trnL-UAA · PX971248.1 · 46,365–46,904 bp · +
trnF-GAA · PX971248.1 · 47,203–47,275 bp · +
trnM-CAU · PX971248.1 · 51,269–51,341 bp · +
rbcL · PX971248.1 · 54,231–55,670 bp · +
accD · PX971248.1 · 56,832–57,842 bp · +
psaI · PX971248.1 · 58,317–58,427 bp · +
ycf4 · PX971248.1 · 58,874–59,428 bp · +
cemA · PX971248.1 · 60,041–60,730 bp · +
petA · PX971248.1 · 60,951–61,913 bp · +
petL · PX971248.1 · 64,542–64,637 bp · +
petG · PX971248.1 · 64,785–64,898 bp · +
psaJ · PX971248.1 · 65,629–65,763 bp · +
rpl33 · PX971248.1 · 66,214–66,414 bp · +
rps18 · PX971248.1 · 66,580–66,885 bp · +
rps12 · PX971248.1 · 137,128–137,921 bp · +
psbB · PX971248.1 · 70,913–72,439 bp · +
psbT · PX971248.1 · 72,625–72,732 bp · +
psbH · PX971248.1 · 73,030–73,251 bp · +
petB · PX971248.1 · 73,377–74,734 bp · +
petD · PX971248.1 · 74,928–76,124 bp · +
ycf2 · PX971248.1 · 84,609–91,451 bp · +
ycf15 · PX971248.1 · 91,593–91,790 bp · +
trnV-GAC · PX971248.1 · 98,102–98,173 bp · +
rrn16S · PX971248.1 · 98,400–99,890 bp · +
trnI-GAU · PX971248.1 · 100,189–101,201 bp · +
trnA-UGC · PX971248.1 · 101,266–102,142 bp · +
rrn23S · PX971248.1 · 102,308–105,118 bp · +
rrn4.5S · PX971248.1 · 105,217–105,319 bp · +
rrn5S · PX971248.1 · 105,575–105,695 bp · +
trnR-ACG · PX971248.1 · 105,939–106,012 bp · +
rpl32 · PX971248.1 · 110,630–110,800 bp · +
trnL-UAG · PX971248.1 · 111,514–111,593 bp · +
ccsA · PX971248.1 · 111,686–112,663 bp · +
trnN-GUU · PX971248.1 · 127,007–127,078 bp · +
rps7 · PX971248.1 · 137,975–138,442 bp · +
ndhB · PX971248.1 · 138,771–140,924 bp · +
trnL-CAA · PX971248.1 · 141,484–141,564 bp · +
trnI-CAU · PX971248.1 · 149,095–149,168 bp · +
rpl23 · PX971248.1 · 149,334–149,615 bp · +
rpl2 · PX971248.1 · 149,634–151,116 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia omeiana
ANNOTATED PLASTOME
PX971248.1
151,218 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37804 75609 113414 151218 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1683 4271 2589 Locate
matK gene − 1982 3544 1563 Locate
rps16 gene − 4837 5946 1110 Locate
trnQ-UUG gene − 6519 6590 72 Locate
psbK gene + 6981 7160 180 Locate
psbI gene + 7557 7667 111 Locate
trnS-GCU gene − 7812 7899 88 Locate
trnG-UCC gene + 8584 9336 753 Locate
trnR-UCU gene + 9518 9589 72 Locate
atpA gene − 9696 11219 1524 Locate
atpF gene − 11316 12561 1246 Locate
atpH gene − 12827 13072 246 Locate
atpI gene − 14055 14798 744 Locate
rps2 gene − 15023 15733 711 Locate
rpoC2 gene − 15942 20129 4188 Locate
rpoC1 gene − 20287 23107 2821 Locate
rpoB gene − 23134 26346 3213 Locate
trnC-GCA gene + 27500 27570 71 Locate
petN gene + 27734 27823 90 Locate
psbM gene − 28791 28895 105 Locate
trnD-GUC gene − 29422 29495 74 Locate
trnY-GUA gene − 29606 29689 84 Locate
trnE-UUC gene − 29763 29835 73 Locate
trnT-GGU gene + 30378 30449 72 Locate
psbD gene + 31822 32883 1062 Locate
psbC gene + 32831 34252 1422 Locate
trnS-UGA gene − 34498 34590 93 Locate
psbZ gene + 34925 35113 189 Locate
trnG-GCC gene + 35386 35456 71 Locate
trnM-CAU gene − 35631 35704 74 Locate
rps14 gene − 35849 36151 303 Locate
psaB gene − 36274 38478 2205 Locate
psaA gene − 38504 40756 2253 Locate
ycf3 gene − 41525 43468 1944 Locate
trnS-GGA gene + 44293 44379 87 Locate
rps4 gene − 44656 45261 606 Locate
trnT-UGU gene − 45613 45685 73 Locate
trnL-UAA gene + 46365 46904 540 Locate
trnF-GAA gene + 47203 47275 73 Locate
ndhJ gene − 47809 48285 477 Locate
ndhK gene − 48396 49073 678 Locate
ndhC gene − 49125 49487 363 Locate
trnV-UAC gene − 50432 51080 649 Locate
trnM-CAU gene + 51269 51341 73 Locate
atpE gene − 51552 51953 402 Locate
atpB gene − 51950 53446 1497 Locate
rbcL gene + 54231 55670 1440 Locate
accD gene + 56832 57842 1011 Locate
psaI gene + 58317 58427 111 Locate
ycf4 gene + 58874 59428 555 Locate
cemA gene + 60041 60730 690 Locate
petA gene + 60951 61913 963 Locate
psbJ gene − 62954 63076 123 Locate
psbL gene − 63210 63326 117 Locate
psbF gene − 63350 63469 120 Locate
psbE gene − 63484 63735 252 Locate
petL gene + 64542 64637 96 Locate
petG gene + 64785 64898 114 Locate
trnW-CCA gene − 65013 65086 74 Locate
trnP-UGG gene − 65265 65338 74 Locate
psaJ gene + 65629 65763 135 Locate
rpl33 gene + 66214 66414 201 Locate
rps18 gene + 66580 66885 306 Locate
rpl20 gene − 67118 67504 387 Locate
rps12 gene − 68302 68415 114 Locate
clpP gene − 68540 70470 1931 Locate
psbB gene + 70913 72439 1527 Locate
psbT gene + 72625 72732 108 Locate
psbN gene − 72793 72924 132 Locate
psbH gene + 73030 73251 222 Locate
petB gene + 73377 74734 1358 Locate
petD gene + 74928 76124 1197 Locate
rpoA gene − 76301 77308 1008 Locate
rps11 gene − 77380 77796 417 Locate
rpl36 gene − 77906 78019 114 Locate
infA gene − 78115 78348 234 Locate
rps8 gene − 78475 78879 405 Locate
rpl14 gene − 79063 79431 369 Locate
rpl16 gene − 79563 80841 1279 Locate
rps3 gene − 80977 81639 663 Locate
rpl22 gene − 81624 82091 468 Locate
rps19 gene − 82161 82439 279 Locate
rpl2 gene − 82499 83981 1483 Locate
rpl23 gene − 84000 84281 282 Locate
trnI-CAU gene − 84447 84520 74 Locate
ycf2 gene + 84609 91451 6843 Locate
ycf15 gene + 91593 91790 198 Locate
trnL-CAA gene − 92051 92131 81 Locate
ndhB gene − 92691 94844 2154 Locate
rps7 gene − 95173 95640 468 Locate
rps12 gene − 95694 96487 794 Locate
trnV-GAC gene + 98102 98173 72 Locate
rrn16S gene + 98400 99890 1491 Locate
trnI-GAU gene + 100189 101201 1013 Locate
trnA-UGC gene + 101266 102142 877 Locate
rrn23S gene + 102308 105118 2811 Locate
rrn4.5S gene + 105217 105319 103 Locate
rrn5S gene + 105575 105695 121 Locate
trnR-ACG gene + 105939 106012 74 Locate
trnN-GUU gene − 106537 106608 72 Locate
ndhF gene − 107962 110178 2217 Locate
rpl32 gene + 110630 110800 171 Locate
trnL-UAG gene + 111514 111593 80 Locate
ccsA gene + 111686 112663 978 Locate
ndhD gene − 112902 114443 1542 Locate
psaC gene − 114538 114783 246 Locate
ndhE gene − 115034 115339 306 Locate
ndhG gene − 115560 116090 531 Locate
ndhI gene − 116477 116983 507 Locate
ndhA gene − 117064 119164 2101 Locate
ndhH gene − 119166 120347 1182 Locate
rps15 gene − 120447 120719 273 Locate
ycf1 gene − 121143 126677 5535 Locate
trnN-GUU gene + 127007 127078 72 Locate
trnR-ACG gene − 127603 127676 74 Locate
rrn5S gene − 127920 128040 121 Locate
rrn4.5S gene − 128296 128398 103 Locate
rrn23S gene − 128497 131307 2811 Locate
trnA-UGC gene − 131473 132349 877 Locate
trnI-GAU gene − 132414 133426 1013 Locate
rrn16S gene − 133725 135215 1491 Locate
trnV-GAC gene − 135442 135513 72 Locate
rps12 gene + 137128 137921 794 Locate
rps7 gene + 137975 138442 468 Locate
ndhB gene + 138771 140924 2154 Locate
trnL-CAA gene + 141484 141564 81 Locate
ycf15 gene − 141825 142022 198 Locate
ycf2 gene − 142164 149006 6843 Locate
trnI-CAU gene + 149095 149168 74 Locate
rpl23 gene + 149334 149615 282 Locate
rpl2 gene + 149634 151116 1483 Locate
Status Available
Accession PX971248.1
Length 151,218 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources