Coordinate-aware organelle record

Salvia pachyphylla chloroplast genome

Available PV870865.1 151,269 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	396	1455	1059
trnK-UUU	gene	translation-rna	−	1681	4261	2580
matK	gene	other	−	1993	3523	1530
rps16	gene	ribosomal-protein	−	4819	5917	1098
trnQ-UUG	gene	translation-rna	−	6852	6924	72
psbK	gene	photosystem-ii	+	7310	7496	186
psbI	gene	photosystem-ii	+	7897	8008	111
trnS-GCU	gene	translation-rna	−	8179	8267	88
trnG-UCC	gene	translation-rna	+	8960	9715	755
trnR-UCU	gene	translation-rna	+	9895	9967	72
atpA	gene	atp-synthase	−	10074	11598	1524
atpF	gene	atp-synthase	−	11699	12942	1243
atpH	gene	atp-synthase	−	13214	13460	246
atpI	gene	atp-synthase	−	14494	15238	744
rps2	gene	ribosomal-protein	−	15462	16173	711
rpoC2	gene	rna-polymerase	−	16374	20562	4188
rpoC1	gene	rna-polymerase	−	20727	23542	2815
rpoB	gene	rna-polymerase	−	23568	26781	3213
trnC-GCA	gene	translation-rna	+	27941	28012	71
petN	gene	cytochrome	+	28167	28257	90
psbM	gene	photosystem-ii	−	29260	29365	105
trnD-GUC	gene	translation-rna	−	29880	29954	74
trnY-GUA	gene	translation-rna	−	30064	30148	84
trnE-UUC	gene	translation-rna	−	30219	30292	73
trnT-GGU	gene	translation-rna	+	30850	30922	72
psbD	gene	photosystem-ii	+	32287	33349	1062
psbC	gene	photosystem-ii	+	33296	34718	1422
trnS-UGA	gene	translation-rna	−	34965	35058	93
psbZ	gene	photosystem-ii	+	35385	35574	189
trnG-GCC	gene	translation-rna	+	35851	35922	71
trnfM-CAU	gene	translation-rna	−	36073	36146	73
rps14	gene	ribosomal-protein	−	36291	36594	303
psaB	gene	photosystem-i	−	36716	38921	2205
psaA	gene	photosystem-i	−	38946	41199	2253
ycf3	gene	other	−	41974	43918	1944
trnS-GGA	gene	translation-rna	+	44742	44829	87
rps4	gene	ribosomal-protein	−	45109	45715	606
trnT-UGU	gene	translation-rna	−	46076	46149	73
trnL-UAA	gene	translation-rna	+	46823	47407	584
trnF-GAA	gene	translation-rna	+	47709	47782	73
ndhJ	gene	nad-dehydrogenase	−	48315	48792	477
ndhK	gene	nad-dehydrogenase	−	48902	49580	678
ndhC	gene	nad-dehydrogenase	−	49631	49994	363
trnV-UAC	gene	translation-rna	−	50939	51581	642
trnM-CAU	gene	translation-rna	+	51761	51834	73
atpE	gene	atp-synthase	−	52043	52445	402
atpB	gene	atp-synthase	−	52441	53938	1497
rbcL	gene	other	+	54738	56172	1434
accD	gene	other	+	56871	58353	1482
psaI	gene	photosystem-i	+	58817	58928	111
ycf4	gene	other	+	59373	59928	555
cemA	gene	other	+	60577	61267	690
petA	gene	cytochrome	+	61492	62455	963
psbJ	gene	photosystem-ii	−	63488	63611	123
psbL	gene	photosystem-ii	−	63745	63862	117
psbF	gene	photosystem-ii	−	63885	64005	120
psbE	gene	photosystem-ii	−	64019	64271	252
petL	gene	cytochrome	+	65088	65184	96
petG	gene	cytochrome	+	65362	65476	114
trnW-CCA	gene	translation-rna	−	65590	65664	74
trnP-UGG	gene	translation-rna	−	65838	65912	74
psaJ	gene	photosystem-i	+	66196	66331	135
rpl33	gene	ribosomal-protein	+	66771	66972	201
rps18	gene	ribosomal-protein	+	67144	67450	306
rpl20	gene	ribosomal-protein	−	67684	68071	387
rps12	gene	ribosomal-protein	−	68872	97046	28174
rps12	gene	ribosomal-protein	+	68872	138015	69143
clpP	gene	other	−	69109	71021	1912
psbB	gene	photosystem-ii	+	71459	72986	1527
psbT	gene	photosystem-ii	+	73167	73269	102
psbN	gene	photosystem-ii	−	73334	73466	132
psbH	gene	photosystem-ii	+	73571	73793	222
petB	gene	cytochrome	+	73918	75293	1375
petD	gene	cytochrome	+	75480	76671	1191
rpoA	gene	rna-polymerase	−	76847	77855	1008
rps11	gene	ribosomal-protein	−	77925	78342	417
rpl36	gene	ribosomal-protein	−	78452	78566	114
infA	gene	other	−	78665	78899	234
rps8	gene	ribosomal-protein	−	79018	79423	405
rpl14	gene	ribosomal-protein	−	79604	79973	369
rpl16	gene	ribosomal-protein	−	80104	81380	1276
rps3	gene	ribosomal-protein	−	81522	82185	663
rpl22	gene	ribosomal-protein	−	82169	82637	468
rps19	gene	ribosomal-protein	−	82706	82985	279
rpl2	gene	ribosomal-protein	−	83044	84530	1486
rpl23	gene	ribosomal-protein	−	84548	84830	282
trnI-CAU	gene	translation-rna	−	84995	85069	74
ycf2	gene	other	+	85157	92015	6858
ycf15	gene	other	+	92156	92354	198
trnL-CAA	gene	translation-rna	−	92614	92695	81
ndhB	gene	nad-dehydrogenase	−	93255	95403	2148
rps7	gene	ribosomal-protein	−	95731	96199	468
trnV-GAC	gene	translation-rna	+	98683	98755	72
rrn16S	gene	ribosomal-rna	+	98981	100472	1491
trnI-GAU	gene	translation-rna	+	100770	101789	1019
trnA-UGC	gene	translation-rna	+	101853	102730	877
rrn23S	gene	ribosomal-rna	+	102889	105700	2811
rrn4.5S	gene	ribosomal-rna	+	105798	105901	103
rrn5S	gene	ribosomal-rna	+	106156	106277	121
trnR-ACG	gene	translation-rna	+	106520	106594	74
trnN-GUU	gene	translation-rna	−	107096	107168	72
ndhF	gene	nad-dehydrogenase	−	108515	110747	2232
rpl32	gene	ribosomal-protein	+	111180	111351	171
trnL-UAG	gene	translation-rna	+	111654	111734	80
ccsA	gene	other	+	111830	112808	978
ndhD	gene	nad-dehydrogenase	−	113013	114555	1542
psaC	gene	photosystem-i	−	114648	114894	246
ndhE	gene	nad-dehydrogenase	−	115144	115450	306
ndhG	gene	nad-dehydrogenase	−	115662	116193	531
ndhI	gene	nad-dehydrogenase	−	116573	117080	507
ndhA	gene	nad-dehydrogenase	−	117161	119266	2105
ndhH	gene	nad-dehydrogenase	−	119267	120449	1182
rps15	gene	ribosomal-protein	−	120548	120821	273
ycf1	gene	other	−	121238	126770	5532
trnN-GUU	gene	translation-rna	+	127099	127171	72
trnR-ACG	gene	translation-rna	−	127673	127747	74
rrn5S	gene	ribosomal-rna	−	127990	128111	121
rrn4.5S	gene	ribosomal-rna	−	128366	128469	103
rrn23S	gene	ribosomal-rna	−	128567	131378	2811
trnA-UGC	gene	translation-rna	−	131537	132414	877
trnI-GAU	gene	translation-rna	−	132478	133497	1019
rrn16S	gene	ribosomal-rna	−	133795	135286	1491
trnV-GAC	gene	translation-rna	−	135512	135584	72
rps7	gene	ribosomal-protein	+	138068	138536	468
ndhB	gene	nad-dehydrogenase	+	138864	141012	2148
trnL-CAA	gene	translation-rna	+	141572	141653	81
ycf15	gene	other	−	141913	142111	198
ycf2	gene	other	−	142252	149110	6858
trnI-CAU	gene	translation-rna	+	149198	149272	74
rpl23	gene	ribosomal-protein	+	149437	149719	282
rpl2	gene	ribosomal-protein	+	149737	151223	1486

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV870865.1DNA · accDPV870865DNA · atpBPV870865DNA · matKPV870865DNA · ndhFPV870865DNA · psbAPV870865DNA · rbcLPV870865DNA · rps12PV870865DNA · ycf1PV870865