Salvia saccardiana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870867.1 · 11–84 bp · −
psbA · PV870867.1 · 388–1,446 bp · −
trnK-UUU · PV870867.1 · 1,678–4,258 bp · −
matK · PV870867.1 · 1,990–3,519 bp · −
rps16 · PV870867.1 · 4,833–5,932 bp · −
trnQ-UUG · PV870867.1 · 6,492–6,563 bp · −
trnS-GCU · PV870867.1 · 7,781–7,868 bp · −
atpA · PV870867.1 · 9,703–11,226 bp · −
atpF · PV870867.1 · 11,326–12,584 bp · −
atpH · PV870867.1 · 12,856–13,101 bp · −
atpI · PV870867.1 · 14,023–14,766 bp · −
rps2 · PV870867.1 · 14,991–15,701 bp · −
rpoC2 · PV870867.1 · 15,917–20,104 bp · −
rpoC1 · PV870867.1 · 20,269–23,094 bp · −
rpoB · PV870867.1 · 23,121–26,333 bp · −
psbM · PV870867.1 · 28,807–28,911 bp · −
trnD-GUC · PV870867.1 · 29,422–29,495 bp · −
trnY-GUA · PV870867.1 · 29,607–29,690 bp · −
trnE-UUC · PV870867.1 · 29,761–29,833 bp · −
trnS-GCU · PV870867.1 · 34,495–34,578 bp · −
trnfM-CAU · PV870867.1 · 35,634–35,707 bp · −
rps14 · PV870867.1 · 35,852–36,154 bp · −
psaB · PV870867.1 · 36,276–38,480 bp · −
psaA · PV870867.1 · 38,506–40,758 bp · −
ycf3 · PV870867.1 · 41,526–43,485 bp · −
rps4 · PV870867.1 · 44,673–45,278 bp · −
trnT-UGU · PV870867.1 · 45,629–45,701 bp · −
ndhJ · PV870867.1 · 47,977–48,453 bp · −
ndhK · PV870867.1 · 48,570–49,247 bp · −
ndhC · PV870867.1 · 49,299–49,661 bp · −
trnV-UAC · PV870867.1 · 50,597–51,246 bp · −
atpE · PV870867.1 · 51,710–52,111 bp · −
atpB · PV870867.1 · 52,108–53,604 bp · −
psbJ · PV870867.1 · 63,133–63,255 bp · −
psbL · PV870867.1 · 63,385–63,501 bp · −
psbF · PV870867.1 · 63,525–63,644 bp · −
psbE · PV870867.1 · 63,659–63,910 bp · −
trnW-CCA · PV870867.1 · 65,292–65,365 bp · −
trnP-UGG · PV870867.1 · 65,540–65,613 bp · −
rpl20 · PV870867.1 · 67,378–67,764 bp · −
rps12 · PV870867.1 · 68,557–68,670 bp · −
rps12 · PV870867.1 · 95,915–96,708 bp · −
clpP · PV870867.1 · 68,793–70,692 bp · −
psbN · PV870867.1 · 73,035–73,166 bp · −
rpoA · PV870867.1 · 76,556–77,563 bp · −
rps11 · PV870867.1 · 77,634–78,050 bp · −
rpl36 · PV870867.1 · 78,160–78,273 bp · −
infA · PV870867.1 · 78,369–78,602 bp · −
rps8 · PV870867.1 · 78,723–79,127 bp · −
rpl14 · PV870867.1 · 79,298–79,666 bp · −
rpl16 · PV870867.1 · 79,796–81,065 bp · −
rps3 · PV870867.1 · 81,216–81,878 bp · −
rpl22 · PV870867.1 · 81,863–82,330 bp · −
rps19 · PV870867.1 · 82,394–82,672 bp · −
rpl2 · PV870867.1 · 82,733–84,218 bp · −
rpl23 · PV870867.1 · 84,243–84,524 bp · −
trnI-CAU · PV870867.1 · 84,690–84,763 bp · −
trnL-CAA · PV870867.1 · 92,280–92,360 bp · −
ndhB · PV870867.1 · 92,912–95,119 bp · −
rps7 · PV870867.1 · 95,394–95,861 bp · −
trnN-GUU · PV870867.1 · 106,747–106,818 bp · −
ndhF · PV870867.1 · 108,166–110,397 bp · −
ndhD · PV870867.1 · 113,122–114,663 bp · −
psaC · PV870867.1 · 114,757–115,002 bp · −
ndhE · PV870867.1 · 115,253–115,558 bp · −
ndhG · PV870867.1 · 115,778–116,308 bp · −
ndhI · PV870867.1 · 116,682–117,188 bp · −
ndhA · PV870867.1 · 117,269–119,365 bp · −
ndhH · PV870867.1 · 119,367–120,548 bp · −
rps15 · PV870867.1 · 120,648–120,920 bp · −
ycf1 · PV870867.1 · 121,310–126,835 bp · −
trnR-ACG · PV870867.1 · 127,755–127,828 bp · −
rrn5S · PV870867.1 · 128,072–128,192 bp · −
rrn4.5S · PV870867.1 · 128,436–128,538 bp · −
rrn23S · PV870867.1 · 128,637–131,449 bp · −
trnA-UGC · PV870867.1 · 131,619–132,496 bp · −
trnI-GAU · PV870867.1 · 132,561–133,580 bp · −
rrn16S · PV870867.1 · 133,879–135,369 bp · −
trnV-GAC · PV870867.1 · 135,596–135,667 bp · −
ycf15 · PV870867.1 · 141,959–142,156 bp · −
ycf2 · PV870867.1 · 142,298–149,131 bp · −
psbK · PV870867.1 · 6,949–7,128 bp · +
psbI · PV870867.1 · 7,533–7,643 bp · +
trnG-UCC · PV870867.1 · 8,579–9,333 bp · +
trnR-UCU · PV870867.1 · 9,526–9,597 bp · +
trnC-GCA · PV870867.1 · 27,473–27,543 bp · +
petN · PV870867.1 · 27,707–27,796 bp · +
trnT-GGU · PV870867.1 · 30,403–30,474 bp · +
psbD · PV870867.1 · 31,815–32,876 bp · +
psbC · PV870867.1 · 32,824–34,245 bp · +
psbZ · PV870867.1 · 34,908–35,096 bp · +
trnG-GCC · PV870867.1 · 35,381–35,451 bp · +
trnS-GGA · PV870867.1 · 44,324–44,410 bp · +
trnL-UAA · PV870867.1 · 46,407–46,977 bp · +
trnF-GAA · PV870867.1 · 47,261–47,333 bp · +
trnM-CAU · PV870867.1 · 51,427–51,499 bp · +
rbcL · PV870867.1 · 54,410–55,855 bp · +
accD · PV870867.1 · 56,549–58,021 bp · +
psaI · PV870867.1 · 58,498–58,608 bp · +
ycf4 · PV870867.1 · 59,060–59,614 bp · +
cemA · PV870867.1 · 60,264–60,953 bp · +
petA · PV870867.1 · 61,162–62,124 bp · +
petL · PV870867.1 · 64,789–64,884 bp · +
petG · PV870867.1 · 65,063–65,176 bp · +
psaJ · PV870867.1 · 65,884–66,018 bp · +
rpl33 · PV870867.1 · 66,462–66,662 bp · +
rps18 · PV870867.1 · 66,833–67,138 bp · +
rps12 · PV870867.1 · 137,275–138,068 bp · +
psbB · PV870867.1 · 71,157–72,683 bp · +
psbT · PV870867.1 · 72,867–72,974 bp · +
psbH · PV870867.1 · 73,272–73,493 bp · +
petB · PV870867.1 · 73,620–74,995 bp · +
petD · PV870867.1 · 75,183–76,379 bp · +
ycf2 · PV870867.1 · 84,852–91,685 bp · +
ycf15 · PV870867.1 · 91,827–92,024 bp · +
trnV-GAC · PV870867.1 · 98,316–98,387 bp · +
rrn16S · PV870867.1 · 98,614–100,104 bp · +
trnI-GAU · PV870867.1 · 100,403–101,422 bp · +
trnA-UGC · PV870867.1 · 101,487–102,364 bp · +
rrn23S · PV870867.1 · 102,534–105,346 bp · +
rrn4.5S · PV870867.1 · 105,445–105,547 bp · +
rrn5S · PV870867.1 · 105,791–105,911 bp · +
trnR-ACG · PV870867.1 · 106,155–106,228 bp · +
rpl32 · PV870867.1 · 110,855–111,025 bp · +
trnL-UAG · PV870867.1 · 111,747–111,826 bp · +
ccsA · PV870867.1 · 111,924–112,895 bp · +
trnN-GUU · PV870867.1 · 127,165–127,236 bp · +
rps7 · PV870867.1 · 138,122–138,589 bp · +
ndhB · PV870867.1 · 138,864–141,071 bp · +
trnL-CAA · PV870867.1 · 141,623–141,703 bp · +
trnI-CAU · PV870867.1 · 149,220–149,293 bp · +
rpl23 · PV870867.1 · 149,459–149,740 bp · +
rpl2 · PV870867.1 · 149,765–151,250 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia saccardiana
ANNOTATED PLASTOME
PV870867.1
151,353 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37838 75676 113515 151353 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-GCU trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 388 1446 1059 Locate
trnK-UUU gene − 1678 4258 2581 Locate
matK gene − 1990 3519 1530 Locate
rps16 gene − 4833 5932 1100 Locate
trnQ-UUG gene − 6492 6563 72 Locate
psbK gene + 6949 7128 180 Locate
psbI gene + 7533 7643 111 Locate
trnS-GCU gene − 7781 7868 88 Locate
trnG-UCC gene + 8579 9333 755 Locate
trnR-UCU gene + 9526 9597 72 Locate
atpA gene − 9703 11226 1524 Locate
atpF gene − 11326 12584 1259 Locate
atpH gene − 12856 13101 246 Locate
atpI gene − 14023 14766 744 Locate
rps2 gene − 14991 15701 711 Locate
rpoC2 gene − 15917 20104 4188 Locate
rpoC1 gene − 20269 23094 2826 Locate
rpoB gene − 23121 26333 3213 Locate
trnC-GCA gene + 27473 27543 71 Locate
petN gene + 27707 27796 90 Locate
psbM gene − 28807 28911 105 Locate
trnD-GUC gene − 29422 29495 74 Locate
trnY-GUA gene − 29607 29690 84 Locate
trnE-UUC gene − 29761 29833 73 Locate
trnT-GGU gene + 30403 30474 72 Locate
psbD gene + 31815 32876 1062 Locate
psbC gene + 32824 34245 1422 Locate
trnS-GCU gene − 34495 34578 84 Locate
psbZ gene + 34908 35096 189 Locate
trnG-GCC gene + 35381 35451 71 Locate
trnfM-CAU gene − 35634 35707 74 Locate
rps14 gene − 35852 36154 303 Locate
psaB gene − 36276 38480 2205 Locate
psaA gene − 38506 40758 2253 Locate
ycf3 gene − 41526 43485 1960 Locate
trnS-GGA gene + 44324 44410 87 Locate
rps4 gene − 44673 45278 606 Locate
trnT-UGU gene − 45629 45701 73 Locate
trnL-UAA gene + 46407 46977 571 Locate
trnF-GAA gene + 47261 47333 73 Locate
ndhJ gene − 47977 48453 477 Locate
ndhK gene − 48570 49247 678 Locate
ndhC gene − 49299 49661 363 Locate
trnV-UAC gene − 50597 51246 650 Locate
trnM-CAU gene + 51427 51499 73 Locate
atpE gene − 51710 52111 402 Locate
atpB gene − 52108 53604 1497 Locate
rbcL gene + 54410 55855 1446 Locate
accD gene + 56549 58021 1473 Locate
psaI gene + 58498 58608 111 Locate
ycf4 gene + 59060 59614 555 Locate
cemA gene + 60264 60953 690 Locate
petA gene + 61162 62124 963 Locate
psbJ gene − 63133 63255 123 Locate
psbL gene − 63385 63501 117 Locate
psbF gene − 63525 63644 120 Locate
psbE gene − 63659 63910 252 Locate
petL gene + 64789 64884 96 Locate
petG gene + 65063 65176 114 Locate
trnW-CCA gene − 65292 65365 74 Locate
trnP-UGG gene − 65540 65613 74 Locate
psaJ gene + 65884 66018 135 Locate
rpl33 gene + 66462 66662 201 Locate
rps18 gene + 66833 67138 306 Locate
rpl20 gene − 67378 67764 387 Locate
rps12 gene − 68557 68670 114 Locate
clpP gene − 68793 70692 1900 Locate
psbB gene + 71157 72683 1527 Locate
psbT gene + 72867 72974 108 Locate
psbN gene − 73035 73166 132 Locate
psbH gene + 73272 73493 222 Locate
petB gene + 73620 74995 1376 Locate
petD gene + 75183 76379 1197 Locate
rpoA gene − 76556 77563 1008 Locate
rps11 gene − 77634 78050 417 Locate
rpl36 gene − 78160 78273 114 Locate
infA gene − 78369 78602 234 Locate
rps8 gene − 78723 79127 405 Locate
rpl14 gene − 79298 79666 369 Locate
rpl16 gene − 79796 81065 1270 Locate
rps3 gene − 81216 81878 663 Locate
rpl22 gene − 81863 82330 468 Locate
rps19 gene − 82394 82672 279 Locate
rpl2 gene − 82733 84218 1486 Locate
rpl23 gene − 84243 84524 282 Locate
trnI-CAU gene − 84690 84763 74 Locate
ycf2 gene + 84852 91685 6834 Locate
ycf15 gene + 91827 92024 198 Locate
trnL-CAA gene − 92280 92360 81 Locate
ndhB gene − 92912 95119 2208 Locate
rps7 gene − 95394 95861 468 Locate
rps12 gene − 95915 96708 794 Locate
trnV-GAC gene + 98316 98387 72 Locate
rrn16S gene + 98614 100104 1491 Locate
trnI-GAU gene + 100403 101422 1020 Locate
trnA-UGC gene + 101487 102364 878 Locate
rrn23S gene + 102534 105346 2813 Locate
rrn4.5S gene + 105445 105547 103 Locate
rrn5S gene + 105791 105911 121 Locate
trnR-ACG gene + 106155 106228 74 Locate
trnN-GUU gene − 106747 106818 72 Locate
ndhF gene − 108166 110397 2232 Locate
rpl32 gene + 110855 111025 171 Locate
trnL-UAG gene + 111747 111826 80 Locate
ccsA gene + 111924 112895 972 Locate
ndhD gene − 113122 114663 1542 Locate
psaC gene − 114757 115002 246 Locate
ndhE gene − 115253 115558 306 Locate
ndhG gene − 115778 116308 531 Locate
ndhI gene − 116682 117188 507 Locate
ndhA gene − 117269 119365 2097 Locate
ndhH gene − 119367 120548 1182 Locate
rps15 gene − 120648 120920 273 Locate
ycf1 gene − 121310 126835 5526 Locate
trnN-GUU gene + 127165 127236 72 Locate
trnR-ACG gene − 127755 127828 74 Locate
rrn5S gene − 128072 128192 121 Locate
rrn4.5S gene − 128436 128538 103 Locate
rrn23S gene − 128637 131449 2813 Locate
trnA-UGC gene − 131619 132496 878 Locate
trnI-GAU gene − 132561 133580 1020 Locate
rrn16S gene − 133879 135369 1491 Locate
trnV-GAC gene − 135596 135667 72 Locate
rps12 gene + 137275 138068 794 Locate
rps7 gene + 138122 138589 468 Locate
ndhB gene + 138864 141071 2208 Locate
trnL-CAA gene + 141623 141703 81 Locate
ycf15 gene − 141959 142156 198 Locate
ycf2 gene − 142298 149131 6834 Locate
trnI-CAU gene + 149220 149293 74 Locate
rpl23 gene + 149459 149740 282 Locate
rpl2 gene + 149765 151250 1486 Locate
Status Available
Accession PV870867.1
Length 151,353 bp
GC content 37.9%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources