Salvia tuerckheimii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PX971249.1 · 2–75 bp · −
psbA · PX971249.1 · 392–1,450 bp · −
trnK-UUU · PX971249.1 · 1,682–4,247 bp · −
matK · PX971249.1 · 1,986–3,509 bp · −
rps16 · PX971249.1 · 4,818–5,916 bp · −
trnQ-UUG · PX971249.1 · 6,673–6,744 bp · −
trnS-GCU · PX971249.1 · 7,966–8,053 bp · −
atpA · PX971249.1 · 9,876–11,399 bp · −
atpF · PX971249.1 · 11,498–12,762 bp · −
atpH · PX971249.1 · 13,036–13,281 bp · −
atpI · PX971249.1 · 14,295–15,038 bp · −
rps2 · PX971249.1 · 15,262–15,972 bp · −
rpoC2 · PX971249.1 · 16,177–20,364 bp · −
rpoC1 · PX971249.1 · 20,531–23,342 bp · −
rpoB · PX971249.1 · 23,369–26,581 bp · −
psbM · PX971249.1 · 29,043–29,147 bp · −
trnD-GUC · PX971249.1 · 29,518–29,591 bp · −
trnY-GUA · PX971249.1 · 29,704–29,787 bp · −
trnE-UUC · PX971249.1 · 29,858–29,930 bp · −
trnS-UGA · PX971249.1 · 34,585–34,677 bp · −
trnM-CAU · PX971249.1 · 35,698–35,771 bp · −
rps14 · PX971249.1 · 35,916–36,218 bp · −
psaB · PX971249.1 · 36,341–38,545 bp · −
psaA · PX971249.1 · 38,571–40,823 bp · −
ycf3 · PX971249.1 · 41,559–43,490 bp · −
rps4 · PX971249.1 · 44,680–45,285 bp · −
trnT-UGU · PX971249.1 · 45,640–45,712 bp · −
ndhJ · PX971249.1 · 47,782–48,258 bp · −
ndhK · PX971249.1 · 48,369–49,046 bp · −
ndhC · PX971249.1 · 49,098–49,460 bp · −
trnV-UAC · PX971249.1 · 50,266–50,911 bp · −
atpE · PX971249.1 · 51,354–51,755 bp · −
atpB · PX971249.1 · 51,776–53,248 bp · −
psbJ · PX971249.1 · 62,658–62,780 bp · −
psbL · PX971249.1 · 62,910–63,026 bp · −
psbF · PX971249.1 · 63,050–63,169 bp · −
psbE · PX971249.1 · 63,184–63,435 bp · −
trnW-CCA · PX971249.1 · 64,844–64,917 bp · −
trnP-UGG · PX971249.1 · 65,092–65,165 bp · −
rpl20 · PX971249.1 · 66,932–67,318 bp · −
rps12 · PX971249.1 · 68,127–68,240 bp · −
rps12 · PX971249.1 · 95,493–96,286 bp · −
clpP · PX971249.1 · 68,364–70,272 bp · −
psbN · PX971249.1 · 72,600–72,731 bp · −
rpoA · PX971249.1 · 76,100–77,107 bp · −
rps11 · PX971249.1 · 77,177–77,593 bp · −
rpl36 · PX971249.1 · 77,705–77,818 bp · −
infA · PX971249.1 · 77,914–78,147 bp · −
rps8 · PX971249.1 · 78,269–78,673 bp · −
rpl14 · PX971249.1 · 78,848–79,216 bp · −
rpl16 · PX971249.1 · 79,347–80,626 bp · −
rps3 · PX971249.1 · 80,769–81,431 bp · −
rpl22 · PX971249.1 · 81,416–81,883 bp · −
rps19 · PX971249.1 · 81,953–82,231 bp · −
rpl2 · PX971249.1 · 82,292–83,783 bp · −
rpl23 · PX971249.1 · 83,802–84,083 bp · −
trnI-CAU · PX971249.1 · 84,249–84,322 bp · −
trnL-CAA · PX971249.1 · 91,850–91,930 bp · −
ndhB · PX971249.1 · 92,490–94,643 bp · −
rps7 · PX971249.1 · 94,972–95,439 bp · −
trnN-GUU · PX971249.1 · 106,402–106,473 bp · −
ndhF · PX971249.1 · 107,821–110,052 bp · −
ndhD · PX971249.1 · 112,718–114,259 bp · −
psaC · PX971249.1 · 114,354–114,599 bp · −
ndhE · PX971249.1 · 114,850–115,155 bp · −
ndhG · PX971249.1 · 115,368–115,898 bp · −
ndhI · PX971249.1 · 116,265–116,771 bp · −
ndhA · PX971249.1 · 116,852–118,953 bp · −
ndhH · PX971249.1 · 118,955–120,136 bp · −
rps15 · PX971249.1 · 120,240–120,512 bp · −
ycf1 · PX971249.1 · 120,919–126,444 bp · −
trnR-ACG · PX971249.1 · 127,348–127,421 bp · −
rrn5S · PX971249.1 · 127,665–127,785 bp · −
rrn4.5S · PX971249.1 · 128,041–128,143 bp · −
rrn23S · PX971249.1 · 128,242–131,052 bp · −
trnA-UGC · PX971249.1 · 131,218–132,094 bp · −
trnI-GAU · PX971249.1 · 132,159–133,177 bp · −
rrn16S · PX971249.1 · 133,476–134,966 bp · −
trnV-GAC · PX971249.1 · 135,193–135,264 bp · −
ycf15 · PX971249.1 · 141,658–141,855 bp · −
ycf2 · PX971249.1 · 141,997–148,836 bp · −
psbK · PX971249.1 · 7,130–7,315 bp · +
psbI · PX971249.1 · 7,708–7,818 bp · +
trnG-UCC · PX971249.1 · 8,759–9,519 bp · +
trnR-UCU · PX971249.1 · 9,695–9,766 bp · +
trnC-GCA · PX971249.1 · 27,745–27,815 bp · +
petN · PX971249.1 · 27,971–28,060 bp · +
trnT-GGU · PX971249.1 · 30,472–30,543 bp · +
psbD · PX971249.1 · 31,916–32,977 bp · +
psbC · PX971249.1 · 32,925–34,346 bp · +
psbZ · PX971249.1 · 35,005–35,193 bp · +
trnG-GCC · PX971249.1 · 35,471–35,541 bp · +
trnS-GGA · PX971249.1 · 44,316–44,402 bp · +
trnL-UAA · PX971249.1 · 46,371–46,945 bp · +
trnF-GAA · PX971249.1 · 47,233–47,305 bp · +
trnM-CAU · PX971249.1 · 51,092–51,164 bp · +
rbcL · PX971249.1 · 54,044–55,477 bp · +
accD · PX971249.1 · 56,518–57,576 bp · +
psaI · PX971249.1 · 58,040–58,150 bp · +
ycf4 · PX971249.1 · 58,595–59,149 bp · +
cemA · PX971249.1 · 59,791–60,480 bp · +
petA · PX971249.1 · 60,702–61,664 bp · +
petL · PX971249.1 · 64,343–64,438 bp · +
petG · PX971249.1 · 64,616–64,729 bp · +
psaJ · PX971249.1 · 65,442–65,576 bp · +
rpl33 · PX971249.1 · 66,015–66,215 bp · +
rps18 · PX971249.1 · 66,388–66,693 bp · +
rps12 · PX971249.1 · 136,961–137,754 bp · +
psbB · PX971249.1 · 70,717–72,243 bp · +
psbT · PX971249.1 · 72,433–72,534 bp · +
psbH · PX971249.1 · 72,837–73,058 bp · +
petB · PX971249.1 · 73,192–74,553 bp · +
petD · PX971249.1 · 74,741–75,924 bp · +
ycf2 · PX971249.1 · 84,411–91,250 bp · +
ycf15 · PX971249.1 · 91,392–91,589 bp · +
trnV-GAC · PX971249.1 · 97,983–98,054 bp · +
rrn16S · PX971249.1 · 98,281–99,771 bp · +
trnI-GAU · PX971249.1 · 100,070–101,088 bp · +
trnA-UGC · PX971249.1 · 101,153–102,029 bp · +
rrn23S · PX971249.1 · 102,195–105,005 bp · +
rrn4.5S · PX971249.1 · 105,104–105,206 bp · +
rrn5S · PX971249.1 · 105,462–105,582 bp · +
trnR-ACG · PX971249.1 · 105,826–105,899 bp · +
rpl32 · PX971249.1 · 110,508–110,678 bp · +
trnL-UAG · PX971249.1 · 111,326–111,405 bp · +
ccsA · PX971249.1 · 111,502–112,479 bp · +
trnN-GUU · PX971249.1 · 126,774–126,845 bp · +
rps7 · PX971249.1 · 137,808–138,275 bp · +
ndhB · PX971249.1 · 138,604–140,757 bp · +
trnL-CAA · PX971249.1 · 141,317–141,397 bp · +
trnI-CAU · PX971249.1 · 148,925–148,998 bp · +
rpl23 · PX971249.1 · 149,164–149,445 bp · +
rpl2 · PX971249.1 · 149,464–150,955 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia tuerckheimii
ANNOTATED PLASTOME
PX971249.1
151,058 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37764 75529 113294 151058 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 392 1450 1059 Locate
trnK-UUU gene − 1682 4247 2566 Locate
matK gene − 1986 3509 1524 Locate
rps16 gene − 4818 5916 1099 Locate
trnQ-UUG gene − 6673 6744 72 Locate
psbK gene + 7130 7315 186 Locate
psbI gene + 7708 7818 111 Locate
trnS-GCU gene − 7966 8053 88 Locate
trnG-UCC gene + 8759 9519 761 Locate
trnR-UCU gene + 9695 9766 72 Locate
atpA gene − 9876 11399 1524 Locate
atpF gene − 11498 12762 1265 Locate
atpH gene − 13036 13281 246 Locate
atpI gene − 14295 15038 744 Locate
rps2 gene − 15262 15972 711 Locate
rpoC2 gene − 16177 20364 4188 Locate
rpoC1 gene − 20531 23342 2812 Locate
rpoB gene − 23369 26581 3213 Locate
trnC-GCA gene + 27745 27815 71 Locate
petN gene + 27971 28060 90 Locate
psbM gene − 29043 29147 105 Locate
trnD-GUC gene − 29518 29591 74 Locate
trnY-GUA gene − 29704 29787 84 Locate
trnE-UUC gene − 29858 29930 73 Locate
trnT-GGU gene + 30472 30543 72 Locate
psbD gene + 31916 32977 1062 Locate
psbC gene + 32925 34346 1422 Locate
trnS-UGA gene − 34585 34677 93 Locate
psbZ gene + 35005 35193 189 Locate
trnG-GCC gene + 35471 35541 71 Locate
trnM-CAU gene − 35698 35771 74 Locate
rps14 gene − 35916 36218 303 Locate
psaB gene − 36341 38545 2205 Locate
psaA gene − 38571 40823 2253 Locate
ycf3 gene − 41559 43490 1932 Locate
trnS-GGA gene + 44316 44402 87 Locate
rps4 gene − 44680 45285 606 Locate
trnT-UGU gene − 45640 45712 73 Locate
trnL-UAA gene + 46371 46945 575 Locate
trnF-GAA gene + 47233 47305 73 Locate
ndhJ gene − 47782 48258 477 Locate
ndhK gene − 48369 49046 678 Locate
ndhC gene − 49098 49460 363 Locate
trnV-UAC gene − 50266 50911 646 Locate
trnM-CAU gene + 51092 51164 73 Locate
atpE gene − 51354 51755 402 Locate
atpB gene − 51776 53248 1473 Locate
rbcL gene + 54044 55477 1434 Locate
accD gene + 56518 57576 1059 Locate
psaI gene + 58040 58150 111 Locate
ycf4 gene + 58595 59149 555 Locate
cemA gene + 59791 60480 690 Locate
petA gene + 60702 61664 963 Locate
psbJ gene − 62658 62780 123 Locate
psbL gene − 62910 63026 117 Locate
psbF gene − 63050 63169 120 Locate
psbE gene − 63184 63435 252 Locate
petL gene + 64343 64438 96 Locate
petG gene + 64616 64729 114 Locate
trnW-CCA gene − 64844 64917 74 Locate
trnP-UGG gene − 65092 65165 74 Locate
psaJ gene + 65442 65576 135 Locate
rpl33 gene + 66015 66215 201 Locate
rps18 gene + 66388 66693 306 Locate
rpl20 gene − 66932 67318 387 Locate
rps12 gene − 68127 68240 114 Locate
clpP gene − 68364 70272 1909 Locate
psbB gene + 70717 72243 1527 Locate
psbT gene + 72433 72534 102 Locate
psbN gene − 72600 72731 132 Locate
psbH gene + 72837 73058 222 Locate
petB gene + 73192 74553 1362 Locate
petD gene + 74741 75924 1184 Locate
rpoA gene − 76100 77107 1008 Locate
rps11 gene − 77177 77593 417 Locate
rpl36 gene − 77705 77818 114 Locate
infA gene − 77914 78147 234 Locate
rps8 gene − 78269 78673 405 Locate
rpl14 gene − 78848 79216 369 Locate
rpl16 gene − 79347 80626 1280 Locate
rps3 gene − 80769 81431 663 Locate
rpl22 gene − 81416 81883 468 Locate
rps19 gene − 81953 82231 279 Locate
rpl2 gene − 82292 83783 1492 Locate
rpl23 gene − 83802 84083 282 Locate
trnI-CAU gene − 84249 84322 74 Locate
ycf2 gene + 84411 91250 6840 Locate
ycf15 gene + 91392 91589 198 Locate
trnL-CAA gene − 91850 91930 81 Locate
ndhB gene − 92490 94643 2154 Locate
rps7 gene − 94972 95439 468 Locate
rps12 gene − 95493 96286 794 Locate
trnV-GAC gene + 97983 98054 72 Locate
rrn16S gene + 98281 99771 1491 Locate
trnI-GAU gene + 100070 101088 1019 Locate
trnA-UGC gene + 101153 102029 877 Locate
rrn23S gene + 102195 105005 2811 Locate
rrn4.5S gene + 105104 105206 103 Locate
rrn5S gene + 105462 105582 121 Locate
trnR-ACG gene + 105826 105899 74 Locate
trnN-GUU gene − 106402 106473 72 Locate
ndhF gene − 107821 110052 2232 Locate
rpl32 gene + 110508 110678 171 Locate
trnL-UAG gene + 111326 111405 80 Locate
ccsA gene + 111502 112479 978 Locate
ndhD gene − 112718 114259 1542 Locate
psaC gene − 114354 114599 246 Locate
ndhE gene − 114850 115155 306 Locate
ndhG gene − 115368 115898 531 Locate
ndhI gene − 116265 116771 507 Locate
ndhA gene − 116852 118953 2102 Locate
ndhH gene − 118955 120136 1182 Locate
rps15 gene − 120240 120512 273 Locate
ycf1 gene − 120919 126444 5526 Locate
trnN-GUU gene + 126774 126845 72 Locate
trnR-ACG gene − 127348 127421 74 Locate
rrn5S gene − 127665 127785 121 Locate
rrn4.5S gene − 128041 128143 103 Locate
rrn23S gene − 128242 131052 2811 Locate
trnA-UGC gene − 131218 132094 877 Locate
trnI-GAU gene − 132159 133177 1019 Locate
rrn16S gene − 133476 134966 1491 Locate
trnV-GAC gene − 135193 135264 72 Locate
rps12 gene + 136961 137754 794 Locate
rps7 gene + 137808 138275 468 Locate
ndhB gene + 138604 140757 2154 Locate
trnL-CAA gene + 141317 141397 81 Locate
ycf15 gene − 141658 141855 198 Locate
ycf2 gene − 141997 148836 6840 Locate
trnI-CAU gene + 148925 148998 74 Locate
rpl23 gene + 149164 149445 282 Locate
rpl2 gene + 149464 150955 1492 Locate
Status Available
Accession PX971249.1
Length 151,058 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources