Salvia xanthocheila chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV870871.1 · 11–84 bp · −
psbA · PV870871.1 · 388–1,446 bp · −
trnK-UUU · PV870871.1 · 1,678–4,268 bp · −
matK · PV870871.1 · 1,999–3,528 bp · −
rps16 · PV870871.1 · 4,829–5,925 bp · −
trnQ-UUG · PV870871.1 · 6,469–6,540 bp · −
trnS-GCU · PV870871.1 · 7,759–7,846 bp · −
atpA · PV870871.1 · 9,664–11,187 bp · −
atpF · PV870871.1 · 11,283–12,540 bp · −
atpH · PV870871.1 · 12,812–13,057 bp · −
atpI · PV870871.1 · 13,999–14,742 bp · −
rps2 · PV870871.1 · 14,967–15,677 bp · −
rpoC2 · PV870871.1 · 15,893–20,080 bp · −
rpoC1 · PV870871.1 · 20,245–23,050 bp · −
rpoB · PV870871.1 · 23,077–26,289 bp · −
psbM · PV870871.1 · 28,737–28,841 bp · −
trnD-GUC · PV870871.1 · 29,352–29,425 bp · −
trnY-GUA · PV870871.1 · 29,536–29,619 bp · −
trnE-UUC · PV870871.1 · 29,690–29,762 bp · −
trnS-UGA · PV870871.1 · 34,430–34,521 bp · −
trnfM-CAU · PV870871.1 · 35,561–35,634 bp · −
rps14 · PV870871.1 · 35,779–36,081 bp · −
psaB · PV870871.1 · 36,203–38,407 bp · −
psaA · PV870871.1 · 38,433–40,685 bp · −
ycf3 · PV870871.1 · 41,473–43,433 bp · −
rps4 · PV870871.1 · 44,633–45,238 bp · −
trnT-UGU · PV870871.1 · 45,598–45,670 bp · −
ndhJ · PV870871.1 · 47,929–48,405 bp · −
ndhK · PV870871.1 · 48,516–49,193 bp · −
ndhC · PV870871.1 · 49,245–49,607 bp · −
trnV-UAC · PV870871.1 · 50,564–51,212 bp · −
atpE · PV870871.1 · 51,671–52,072 bp · −
atpB · PV870871.1 · 52,069–53,565 bp · −
psbJ · PV870871.1 · 63,038–63,160 bp · −
psbL · PV870871.1 · 63,290–63,406 bp · −
psbF · PV870871.1 · 63,430–63,549 bp · −
psbE · PV870871.1 · 63,564–63,815 bp · −
trnW-CCA · PV870871.1 · 65,219–65,292 bp · −
trnP-UGG · PV870871.1 · 65,466–65,539 bp · −
rpl20 · PV870871.1 · 67,301–67,687 bp · −
rps12 · PV870871.1 · 68,476–68,589 bp · −
rps12 · PV870871.1 · 95,818–96,611 bp · −
clpP · PV870871.1 · 68,712–70,614 bp · −
psbN · PV870871.1 · 72,962–73,093 bp · −
rpoA · PV870871.1 · 76,473–77,480 bp · −
rps11 · PV870871.1 · 77,551–77,967 bp · −
rpl36 · PV870871.1 · 78,077–78,190 bp · −
infA · PV870871.1 · 78,286–78,519 bp · −
rps8 · PV870871.1 · 78,640–79,044 bp · −
rpl14 · PV870871.1 · 79,215–79,583 bp · −
rpl16 · PV870871.1 · 79,713–80,982 bp · −
rps3 · PV870871.1 · 81,125–81,787 bp · −
rpl22 · PV870871.1 · 81,772–82,239 bp · −
rps19 · PV870871.1 · 82,303–82,581 bp · −
rpl2 · PV870871.1 · 82,641–84,128 bp · −
rpl23 · PV870871.1 · 84,147–84,428 bp · −
trnI-CAU · PV870871.1 · 84,594–84,667 bp · −
trnL-CAA · PV870871.1 · 92,184–92,264 bp · −
ndhB · PV870871.1 · 92,816–95,022 bp · −
rps7 · PV870871.1 · 95,297–95,764 bp · −
trnN-GUU · PV870871.1 · 106,647–106,718 bp · −
ndhF · PV870871.1 · 108,066–110,297 bp · −
ndhD · PV870871.1 · 113,030–114,571 bp · −
psaC · PV870871.1 · 114,666–114,911 bp · −
ndhE · PV870871.1 · 115,162–115,467 bp · −
ndhG · PV870871.1 · 115,697–116,227 bp · −
ndhI · PV870871.1 · 116,601–117,107 bp · −
ndhA · PV870871.1 · 117,188–119,284 bp · −
ndhH · PV870871.1 · 119,286–120,467 bp · −
rps15 · PV870871.1 · 120,567–120,839 bp · −
ycf1 · PV870871.1 · 121,229–126,748 bp · −
trnR-ACG · PV870871.1 · 127,668–127,741 bp · −
rrn5S · PV870871.1 · 127,985–128,105 bp · −
rrn4.5S · PV870871.1 · 128,355–128,457 bp · −
rrn23S · PV870871.1 · 128,556–131,368 bp · −
trnA-UGC · PV870871.1 · 131,529–132,406 bp · −
trnI-GAU · PV870871.1 · 132,471–133,490 bp · −
rrn16S · PV870871.1 · 133,789–135,279 bp · −
trnV-GAC · PV870871.1 · 135,506–135,577 bp · −
ycf15 · PV870871.1 · 141,868–142,065 bp · −
ycf2 · PV870871.1 · 142,207–149,040 bp · −
psbK · PV870871.1 · 6,926–7,105 bp · +
psbI · PV870871.1 · 7,511–7,621 bp · +
trnG-UCC · PV870871.1 · 8,552–9,306 bp · +
trnR-UCU · PV870871.1 · 9,487–9,558 bp · +
trnC-GCA · PV870871.1 · 27,420–27,490 bp · +
petN · PV870871.1 · 27,654–27,743 bp · +
trnT-GGU · PV870871.1 · 30,331–30,402 bp · +
psbD · PV870871.1 · 31,752–32,813 bp · +
psbC · PV870871.1 · 32,761–34,182 bp · +
psbZ · PV870871.1 · 34,851–35,039 bp · +
trnG-GCC · PV870871.1 · 35,315–35,385 bp · +
trnS-GGA · PV870871.1 · 44,284–44,370 bp · +
trnL-UAA · PV870871.1 · 46,362–46,925 bp · +
trnF-GAA · PV870871.1 · 47,209–47,281 bp · +
trnM-CAU · PV870871.1 · 51,393–51,465 bp · +
rbcL · PV870871.1 · 54,364–55,797 bp · +
accD · PV870871.1 · 56,486–57,958 bp · +
psaI · PV870871.1 · 58,426–58,536 bp · +
ycf4 · PV870871.1 · 58,984–59,538 bp · +
cemA · PV870871.1 · 60,182–60,871 bp · +
petA · PV870871.1 · 61,080–62,042 bp · +
petL · PV870871.1 · 64,715–64,810 bp · +
petG · PV870871.1 · 64,990–65,103 bp · +
psaJ · PV870871.1 · 65,808–65,942 bp · +
rpl33 · PV870871.1 · 66,389–66,589 bp · +
rps18 · PV870871.1 · 66,760–67,065 bp · +
rps12 · PV870871.1 · 137,185–137,978 bp · +
psbB · PV870871.1 · 71,068–72,594 bp · +
psbT · PV870871.1 · 72,777–72,884 bp · +
psbH · PV870871.1 · 73,199–73,420 bp · +
petB · PV870871.1 · 73,546–74,918 bp · +
petD · PV870871.1 · 75,106–76,296 bp · +
ycf2 · PV870871.1 · 84,756–91,589 bp · +
ycf15 · PV870871.1 · 91,731–91,928 bp · +
trnV-GAC · PV870871.1 · 98,219–98,290 bp · +
rrn16S · PV870871.1 · 98,517–100,007 bp · +
trnI-GAU · PV870871.1 · 100,306–101,325 bp · +
trnA-UGC · PV870871.1 · 101,390–102,267 bp · +
rrn23S · PV870871.1 · 102,428–105,240 bp · +
rrn4.5S · PV870871.1 · 105,339–105,441 bp · +
rrn5S · PV870871.1 · 105,691–105,811 bp · +
trnR-ACG · PV870871.1 · 106,055–106,128 bp · +
rpl32 · PV870871.1 · 110,756–110,926 bp · +
trnL-UAG · PV870871.1 · 111,652–111,731 bp · +
ccsA · PV870871.1 · 111,829–112,800 bp · +
trnN-GUU · PV870871.1 · 127,078–127,149 bp · +
rps7 · PV870871.1 · 138,032–138,499 bp · +
ndhB · PV870871.1 · 138,774–140,980 bp · +
trnL-CAA · PV870871.1 · 141,532–141,612 bp · +
trnI-CAU · PV870871.1 · 149,129–149,202 bp · +
rpl23 · PV870871.1 · 149,368–149,649 bp · +
rpl2 · PV870871.1 · 149,668–151,155 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Salvia xanthocheila
ANNOTATED PLASTOME
PV870871.1
151,257 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37814 75628 113443 151257 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 388 1446 1059 Locate
trnK-UUU gene − 1678 4268 2591 Locate
matK gene − 1999 3528 1530 Locate
rps16 gene − 4829 5925 1097 Locate
trnQ-UUG gene − 6469 6540 72 Locate
psbK gene + 6926 7105 180 Locate
psbI gene + 7511 7621 111 Locate
trnS-GCU gene − 7759 7846 88 Locate
trnG-UCC gene + 8552 9306 755 Locate
trnR-UCU gene + 9487 9558 72 Locate
atpA gene − 9664 11187 1524 Locate
atpF gene − 11283 12540 1258 Locate
atpH gene − 12812 13057 246 Locate
atpI gene − 13999 14742 744 Locate
rps2 gene − 14967 15677 711 Locate
rpoC2 gene − 15893 20080 4188 Locate
rpoC1 gene − 20245 23050 2806 Locate
rpoB gene − 23077 26289 3213 Locate
trnC-GCA gene + 27420 27490 71 Locate
petN gene + 27654 27743 90 Locate
psbM gene − 28737 28841 105 Locate
trnD-GUC gene − 29352 29425 74 Locate
trnY-GUA gene − 29536 29619 84 Locate
trnE-UUC gene − 29690 29762 73 Locate
trnT-GGU gene + 30331 30402 72 Locate
psbD gene + 31752 32813 1062 Locate
psbC gene + 32761 34182 1422 Locate
trnS-UGA gene − 34430 34521 92 Locate
psbZ gene + 34851 35039 189 Locate
trnG-GCC gene + 35315 35385 71 Locate
trnfM-CAU gene − 35561 35634 74 Locate
rps14 gene − 35779 36081 303 Locate
psaB gene − 36203 38407 2205 Locate
psaA gene − 38433 40685 2253 Locate
ycf3 gene − 41473 43433 1961 Locate
trnS-GGA gene + 44284 44370 87 Locate
rps4 gene − 44633 45238 606 Locate
trnT-UGU gene − 45598 45670 73 Locate
trnL-UAA gene + 46362 46925 564 Locate
trnF-GAA gene + 47209 47281 73 Locate
ndhJ gene − 47929 48405 477 Locate
ndhK gene − 48516 49193 678 Locate
ndhC gene − 49245 49607 363 Locate
trnV-UAC gene − 50564 51212 649 Locate
trnM-CAU gene + 51393 51465 73 Locate
atpE gene − 51671 52072 402 Locate
atpB gene − 52069 53565 1497 Locate
rbcL gene + 54364 55797 1434 Locate
accD gene + 56486 57958 1473 Locate
psaI gene + 58426 58536 111 Locate
ycf4 gene + 58984 59538 555 Locate
cemA gene + 60182 60871 690 Locate
petA gene + 61080 62042 963 Locate
psbJ gene − 63038 63160 123 Locate
psbL gene − 63290 63406 117 Locate
psbF gene − 63430 63549 120 Locate
psbE gene − 63564 63815 252 Locate
petL gene + 64715 64810 96 Locate
petG gene + 64990 65103 114 Locate
trnW-CCA gene − 65219 65292 74 Locate
trnP-UGG gene − 65466 65539 74 Locate
psaJ gene + 65808 65942 135 Locate
rpl33 gene + 66389 66589 201 Locate
rps18 gene + 66760 67065 306 Locate
rpl20 gene − 67301 67687 387 Locate
rps12 gene − 68476 68589 114 Locate
clpP gene − 68712 70614 1903 Locate
psbB gene + 71068 72594 1527 Locate
psbT gene + 72777 72884 108 Locate
psbN gene − 72962 73093 132 Locate
psbH gene + 73199 73420 222 Locate
petB gene + 73546 74918 1373 Locate
petD gene + 75106 76296 1191 Locate
rpoA gene − 76473 77480 1008 Locate
rps11 gene − 77551 77967 417 Locate
rpl36 gene − 78077 78190 114 Locate
infA gene − 78286 78519 234 Locate
rps8 gene − 78640 79044 405 Locate
rpl14 gene − 79215 79583 369 Locate
rpl16 gene − 79713 80982 1270 Locate
rps3 gene − 81125 81787 663 Locate
rpl22 gene − 81772 82239 468 Locate
rps19 gene − 82303 82581 279 Locate
rpl2 gene − 82641 84128 1488 Locate
rpl23 gene − 84147 84428 282 Locate
trnI-CAU gene − 84594 84667 74 Locate
ycf2 gene + 84756 91589 6834 Locate
ycf15 gene + 91731 91928 198 Locate
trnL-CAA gene − 92184 92264 81 Locate
ndhB gene − 92816 95022 2207 Locate
rps7 gene − 95297 95764 468 Locate
rps12 gene − 95818 96611 794 Locate
trnV-GAC gene + 98219 98290 72 Locate
rrn16S gene + 98517 100007 1491 Locate
trnI-GAU gene + 100306 101325 1020 Locate
trnA-UGC gene + 101390 102267 878 Locate
rrn23S gene + 102428 105240 2813 Locate
rrn4.5S gene + 105339 105441 103 Locate
rrn5S gene + 105691 105811 121 Locate
trnR-ACG gene + 106055 106128 74 Locate
trnN-GUU gene − 106647 106718 72 Locate
ndhF gene − 108066 110297 2232 Locate
rpl32 gene + 110756 110926 171 Locate
trnL-UAG gene + 111652 111731 80 Locate
ccsA gene + 111829 112800 972 Locate
ndhD gene − 113030 114571 1542 Locate
psaC gene − 114666 114911 246 Locate
ndhE gene − 115162 115467 306 Locate
ndhG gene − 115697 116227 531 Locate
ndhI gene − 116601 117107 507 Locate
ndhA gene − 117188 119284 2097 Locate
ndhH gene − 119286 120467 1182 Locate
rps15 gene − 120567 120839 273 Locate
ycf1 gene − 121229 126748 5520 Locate
trnN-GUU gene + 127078 127149 72 Locate
trnR-ACG gene − 127668 127741 74 Locate
rrn5S gene − 127985 128105 121 Locate
rrn4.5S gene − 128355 128457 103 Locate
rrn23S gene − 128556 131368 2813 Locate
trnA-UGC gene − 131529 132406 878 Locate
trnI-GAU gene − 132471 133490 1020 Locate
rrn16S gene − 133789 135279 1491 Locate
trnV-GAC gene − 135506 135577 72 Locate
rps12 gene + 137185 137978 794 Locate
rps7 gene + 138032 138499 468 Locate
ndhB gene + 138774 140980 2207 Locate
trnL-CAA gene + 141532 141612 81 Locate
ycf15 gene − 141868 142065 198 Locate
ycf2 gene − 142207 149040 6834 Locate
trnI-CAU gene + 149129 149202 74 Locate
rpl23 gene + 149368 149649 282 Locate
rpl2 gene + 149668 151155 1488 Locate
Status Available
Accession PV870871.1
Length 151,257 bp
GC content 38.0%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources