Satureja montana chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · NC_066034.1 · 11–85 bp · −
psbA · NC_066034.1 · 412–1,470 bp · −
trnK-UUU · NC_066034.1 · 1,691–4,273 bp · −
matK · NC_066034.1 · 1,984–3,537 bp · −
rps16 · NC_066034.1 · 4,822–5,965 bp · −
trnQ-UUG · NC_066034.1 · 6,925–6,996 bp · −
trnS-GCU · NC_066034.1 · 8,218–8,305 bp · −
atpA · NC_066034.1 · 10,111–11,634 bp · −
atpF · NC_066034.1 · 11,730–12,977 bp · −
atpH · NC_066034.1 · 13,252–13,497 bp · −
atpI · NC_066034.1 · 14,536–15,279 bp · −
rps2 · NC_066034.1 · 15,513–16,223 bp · −
rpoC2 · NC_066034.1 · 16,449–20,636 bp · −
rpoC1 · NC_066034.1 · 20,809–23,620 bp · −
rpoB · NC_066034.1 · 23,647–26,859 bp · −
psbM · NC_066034.1 · 29,286–29,390 bp · −
trnD-GUC · NC_066034.1 · 29,909–29,982 bp · −
trnY-GUA · NC_066034.1 · 30,092–30,175 bp · −
trnE-UUC · NC_066034.1 · 30,258–30,330 bp · −
trnS-UGA · NC_066034.1 · 34,820–34,912 bp · −
trnfM-CAU · NC_066034.1 · 35,941–36,014 bp · −
rps14 · NC_066034.1 · 36,159–36,461 bp · −
psaB · NC_066034.1 · 36,585–38,789 bp · −
psaA · NC_066034.1 · 38,815–41,067 bp · −
pafI · NC_066034.1 · 41,845–43,791 bp · −
rps4 · NC_066034.1 · 44,998–45,603 bp · −
trnT-UGU · NC_066034.1 · 45,984–46,056 bp · −
ndhJ · NC_066034.1 · 48,300–48,776 bp · −
ndhK · NC_066034.1 · 48,887–49,564 bp · −
ndhC · NC_066034.1 · 49,616–49,978 bp · −
trnV-UAC · NC_066034.1 · 50,938–51,588 bp · −
atpE · NC_066034.1 · 52,052–52,453 bp · −
atpB · NC_066034.1 · 52,450–53,940 bp · −
psbJ · NC_066034.1 · 63,476–63,598 bp · −
psbL · NC_066034.1 · 63,733–63,849 bp · −
psbF · NC_066034.1 · 63,873–63,992 bp · −
psbE · NC_066034.1 · 64,007–64,258 bp · −
trnW-CCA · NC_066034.1 · 65,632–65,705 bp · −
trnP-UGG · NC_066034.1 · 65,879–65,952 bp · −
rpl20 · NC_066034.1 · 67,753–68,139 bp · −
rps12 · NC_066034.1 · 68,948–69,061 bp · −
rps12 · NC_066034.1 · 96,247–97,040 bp · −
clpP1 · NC_066034.1 · 69,191–71,106 bp · −
pbf1 · NC_066034.1 · 73,432–73,563 bp · −
rpoA · NC_066034.1 · 76,936–77,943 bp · −
rps11 · NC_066034.1 · 78,014–78,430 bp · −
rpl36 · NC_066034.1 · 78,540–78,653 bp · −
infA · NC_066034.1 · 78,749–78,982 bp · −
rps8 · NC_066034.1 · 79,106–79,510 bp · −
rpl14 · NC_066034.1 · 79,697–80,065 bp · −
rpl16 · NC_066034.1 · 80,197–81,476 bp · −
rps3 · NC_066034.1 · 81,568–82,230 bp · −
rpl22 · NC_066034.1 · 82,215–82,682 bp · −
rps19 · NC_066034.1 · 82,752–83,030 bp · −
rpl2 · NC_066034.1 · 83,091–84,601 bp · −
rpl23 · NC_066034.1 · 84,620–84,901 bp · −
trnI-CAU · NC_066034.1 · 85,067–85,140 bp · −
trnL-CAA · NC_066034.1 · 92,612–92,692 bp · −
ndhB · NC_066034.1 · 93,253–95,460 bp · −
rps7 · NC_066034.1 · 95,726–96,193 bp · −
trnN-GUU · NC_066034.1 · 107,118–107,189 bp · −
ndhF · NC_066034.1 · 108,542–110,773 bp · −
ndhD · NC_066034.1 · 113,574–114,725 bp · −
psaC · NC_066034.1 · 115,196–115,441 bp · −
ndhE · NC_066034.1 · 115,682–115,987 bp · −
ndhG · NC_066034.1 · 116,216–116,746 bp · −
ndhI · NC_066034.1 · 117,139–117,645 bp · −
ndhA · NC_066034.1 · 117,726–119,805 bp · −
ndhH · NC_066034.1 · 119,807–120,988 bp · −
rps15 · NC_066034.1 · 121,088–121,360 bp · −
ycf1 · NC_066034.1 · 121,773–127,328 bp · −
trnR-ACG · NC_066034.1 · 128,248–128,321 bp · −
rrn5 · NC_066034.1 · 128,565–128,685 bp · −
rrn4.5 · NC_066034.1 · 128,946–129,048 bp · −
rrn23 · NC_066034.1 · 129,147–131,957 bp · −
trnA-UGC · NC_066034.1 · 132,123–133,000 bp · −
trnI-GAU · NC_066034.1 · 133,070–134,087 bp · −
rrn16 · NC_066034.1 · 134,386–135,876 bp · −
trnV-GAC · NC_066034.1 · 136,103–136,174 bp · −
ycf15 · NC_066034.1 · 142,490–142,738 bp · −
ycf2 · NC_066034.1 · 142,829–149,617 bp · −
psbK · NC_066034.1 · 7,377–7,562 bp · +
psbI · NC_066034.1 · 7,956–8,066 bp · +
trnG-UCC · NC_066034.1 · 8,997–9,751 bp · +
trnR-UCU · NC_066034.1 · 9,933–10,004 bp · +
trnC-GCA · NC_066034.1 · 28,000–28,070 bp · +
petN · NC_066034.1 · 28,231–28,320 bp · +
trnT-GGU · NC_066034.1 · 30,885–30,956 bp · +
psbD · NC_066034.1 · 32,144–33,205 bp · +
psbC · NC_066034.1 · 33,189–34,574 bp · +
psbZ · NC_066034.1 · 35,251–35,439 bp · +
trnG-GCC · NC_066034.1 · 35,711–35,781 bp · +
trnS-GGA · NC_066034.1 · 44,625–44,711 bp · +
trnL-UAA · NC_066034.1 · 46,716–47,289 bp · +
trnF-GAA · NC_066034.1 · 47,591–47,663 bp · +
trnM-CAU · NC_066034.1 · 51,769–51,841 bp · +
rbcL · NC_066034.1 · 54,721–56,154 bp · +
accD · NC_066034.1 · 56,858–58,339 bp · +
psaI · NC_066034.1 · 58,811–58,921 bp · +
pafII · NC_066034.1 · 59,368–59,922 bp · +
cemA · NC_066034.1 · 60,578–61,267 bp · +
petA · NC_066034.1 · 61,481–62,443 bp · +
petL · NC_066034.1 · 65,130–65,225 bp · +
petG · NC_066034.1 · 65,398–65,511 bp · +
psaJ · NC_066034.1 · 66,243–66,377 bp · +
rpl33 · NC_066034.1 · 66,841–67,044 bp · +
rps18 · NC_066034.1 · 67,215–67,520 bp · +
psbB · NC_066034.1 · 71,558–73,084 bp · +
psbT · NC_066034.1 · 73,267–73,368 bp · +
psbH · NC_066034.1 · 73,669–73,890 bp · +
petB · NC_066034.1 · 74,016–75,393 bp · +
petD · NC_066034.1 · 75,581–76,767 bp · +
ycf2 · NC_066034.1 · 85,229–92,017 bp · +
ycf15 · NC_066034.1 · 92,108–92,356 bp · +
trnV-GAC · NC_066034.1 · 98,672–98,743 bp · +
rrn16 · NC_066034.1 · 98,970–100,460 bp · +
trnI-GAU · NC_066034.1 · 100,759–101,776 bp · +
trnA-UGC · NC_066034.1 · 101,846–102,723 bp · +
rrn23 · NC_066034.1 · 102,889–105,699 bp · +
rrn4.5 · NC_066034.1 · 105,798–105,900 bp · +
rrn5 · NC_066034.1 · 106,161–106,281 bp · +
trnR-ACG · NC_066034.1 · 106,525–106,598 bp · +
ycf1 · NC_066034.1 · 107,518–108,648 bp · +
rpl32 · NC_066034.1 · 111,258–111,428 bp · +
trnL-UAG · NC_066034.1 · 112,165–112,244 bp · +
ccsA · NC_066034.1 · 112,354–113,331 bp · +
trnN-GUU · NC_066034.1 · 127,657–127,728 bp · +
rps7 · NC_066034.1 · 138,653–139,120 bp · +
ndhB · NC_066034.1 · 139,386–141,593 bp · +
trnL-CAA · NC_066034.1 · 142,154–142,234 bp · +
trnI-CAU · NC_066034.1 · 149,706–149,779 bp · +
rpl23 · NC_066034.1 · 149,945–150,226 bp · +
rpl2 · NC_066034.1 · 150,245–151,755 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Satureja montana
ANNOTATED PLASTOME
NC_066034.1
151,858 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37964 75929 113894 151858 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI pafII cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA pafI rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP1 pbf1 rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 85 75 Locate
psbA gene − 412 1470 1059 Locate
trnK-UUU gene − 1691 4273 2583 Locate
matK gene − 1984 3537 1554 Locate
rps16 gene − 4822 5965 1144 Locate
trnQ-UUG gene − 6925 6996 72 Locate
psbK gene + 7377 7562 186 Locate
psbI gene + 7956 8066 111 Locate
trnS-GCU gene − 8218 8305 88 Locate
trnG-UCC gene + 8997 9751 755 Locate
trnR-UCU gene + 9933 10004 72 Locate
atpA gene − 10111 11634 1524 Locate
atpF gene − 11730 12977 1248 Locate
atpH gene − 13252 13497 246 Locate
atpI gene − 14536 15279 744 Locate
rps2 gene − 15513 16223 711 Locate
rpoC2 gene − 16449 20636 4188 Locate
rpoC1 gene − 20809 23620 2812 Locate
rpoB gene − 23647 26859 3213 Locate
trnC-GCA gene + 28000 28070 71 Locate
petN gene + 28231 28320 90 Locate
psbM gene − 29286 29390 105 Locate
trnD-GUC gene − 29909 29982 74 Locate
trnY-GUA gene − 30092 30175 84 Locate
trnE-UUC gene − 30258 30330 73 Locate
trnT-GGU gene + 30885 30956 72 Locate
psbD gene + 32144 33205 1062 Locate
psbC gene + 33189 34574 1386 Locate
trnS-UGA gene − 34820 34912 93 Locate
psbZ gene + 35251 35439 189 Locate
trnG-GCC gene + 35711 35781 71 Locate
trnfM-CAU gene − 35941 36014 74 Locate
rps14 gene − 36159 36461 303 Locate
psaB gene − 36585 38789 2205 Locate
psaA gene − 38815 41067 2253 Locate
pafI gene − 41845 43791 1947 Locate
trnS-GGA gene + 44625 44711 87 Locate
rps4 gene − 44998 45603 606 Locate
trnT-UGU gene − 45984 46056 73 Locate
trnL-UAA gene + 46716 47289 574 Locate
trnF-GAA gene + 47591 47663 73 Locate
ndhJ gene − 48300 48776 477 Locate
ndhK gene − 48887 49564 678 Locate
ndhC gene − 49616 49978 363 Locate
trnV-UAC gene − 50938 51588 651 Locate
trnM-CAU gene + 51769 51841 73 Locate
atpE gene − 52052 52453 402 Locate
atpB gene − 52450 53940 1491 Locate
rbcL gene + 54721 56154 1434 Locate
accD gene + 56858 58339 1482 Locate
psaI gene + 58811 58921 111 Locate
pafII gene + 59368 59922 555 Locate
cemA gene + 60578 61267 690 Locate
petA gene + 61481 62443 963 Locate
psbJ gene − 63476 63598 123 Locate
psbL gene − 63733 63849 117 Locate
psbF gene − 63873 63992 120 Locate
psbE gene − 64007 64258 252 Locate
petL gene + 65130 65225 96 Locate
petG gene + 65398 65511 114 Locate
trnW-CCA gene − 65632 65705 74 Locate
trnP-UGG gene − 65879 65952 74 Locate
psaJ gene + 66243 66377 135 Locate
rpl33 gene + 66841 67044 204 Locate
rps18 gene + 67215 67520 306 Locate
rpl20 gene − 67753 68139 387 Locate
rps12 gene − 68948 69061 114 Locate
clpP1 gene − 69191 71106 1916 Locate
psbB gene + 71558 73084 1527 Locate
psbT gene + 73267 73368 102 Locate
pbf1 gene − 73432 73563 132 Locate
psbH gene + 73669 73890 222 Locate
petB gene + 74016 75393 1378 Locate
petD gene + 75581 76767 1187 Locate
rpoA gene − 76936 77943 1008 Locate
rps11 gene − 78014 78430 417 Locate
rpl36 gene − 78540 78653 114 Locate
infA gene − 78749 78982 234 Locate
rps8 gene − 79106 79510 405 Locate
rpl14 gene − 79697 80065 369 Locate
rpl16 gene − 80197 81476 1280 Locate
rps3 gene − 81568 82230 663 Locate
rpl22 gene − 82215 82682 468 Locate
rps19 gene − 82752 83030 279 Locate
rpl2 gene − 83091 84601 1511 Locate
rpl23 gene − 84620 84901 282 Locate
trnI-CAU gene − 85067 85140 74 Locate
ycf2 gene + 85229 92017 6789 Locate
ycf15 gene + 92108 92356 249 Locate
trnL-CAA gene − 92612 92692 81 Locate
ndhB gene − 93253 95460 2208 Locate
rps7 gene − 95726 96193 468 Locate
rps12 gene − 96247 97040 794 Locate
trnV-GAC gene + 98672 98743 72 Locate
rrn16 gene + 98970 100460 1491 Locate
trnI-GAU gene + 100759 101776 1018 Locate
trnA-UGC gene + 101846 102723 878 Locate
rrn23 gene + 102889 105699 2811 Locate
rrn4.5 gene + 105798 105900 103 Locate
rrn5 gene + 106161 106281 121 Locate
trnR-ACG gene + 106525 106598 74 Locate
trnN-GUU gene − 107118 107189 72 Locate
ycf1 gene + 107518 108648 1131 Locate
ndhF gene − 108542 110773 2232 Locate
rpl32 gene + 111258 111428 171 Locate
trnL-UAG gene + 112165 112244 80 Locate
ccsA gene + 112354 113331 978 Locate
ndhD gene − 113574 114725 1152 Locate
psaC gene − 115196 115441 246 Locate
ndhE gene − 115682 115987 306 Locate
ndhG gene − 116216 116746 531 Locate
ndhI gene − 117139 117645 507 Locate
ndhA gene − 117726 119805 2080 Locate
ndhH gene − 119807 120988 1182 Locate
rps15 gene − 121088 121360 273 Locate
ycf1 gene − 121773 127328 5556 Locate
trnN-GUU gene + 127657 127728 72 Locate
trnR-ACG gene − 128248 128321 74 Locate
rrn5 gene − 128565 128685 121 Locate
rrn4.5 gene − 128946 129048 103 Locate
rrn23 gene − 129147 131957 2811 Locate
trnA-UGC gene − 132123 133000 878 Locate
trnI-GAU gene − 133070 134087 1018 Locate
rrn16 gene − 134386 135876 1491 Locate
trnV-GAC gene − 136103 136174 72 Locate
rps7 gene + 138653 139120 468 Locate
ndhB gene + 139386 141593 2208 Locate
trnL-CAA gene + 142154 142234 81 Locate
ycf15 gene − 142490 142738 249 Locate
ycf2 gene − 142829 149617 6789 Locate
trnI-CAU gene + 149706 149779 74 Locate
rpl23 gene + 149945 150226 282 Locate
rpl2 gene + 150245 151755 1511 Locate
Status Available
Accession NC_066034.1
Length 151,858 bp
GC content 37.9%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 25 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources