Coordinate-aware organelle record

Satureja montana chloroplast genome

Available NC_066034.1 151,858 bp 132 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-85 bp · − strandpsbA · gene · 412-1,470 bp · − strandtrnK-UUU · gene · 1,691-4,273 bp · − strandmatK · gene · 1,984-3,537 bp · − strandrps16 · gene · 4,822-5,965 bp · − strandtrnQ-UUG · gene · 6,925-6,996 bp · − strandpsbK · gene · 7,377-7,562 bp · + strandpsbI · gene · 7,956-8,066 bp · + strandtrnS-GCU · gene · 8,218-8,305 bp · − strandtrnG-UCC · gene · 8,997-9,751 bp · + strandtrnR-UCU · gene · 9,933-10,004 bp · + strandatpA · gene · 10,111-11,634 bp · − strandatpF · gene · 11,730-12,977 bp · − strandatpH · gene · 13,252-13,497 bp · − strandatpI · gene · 14,536-15,279 bp · − strandrps2 · gene · 15,513-16,223 bp · − strandrpoC2 · gene · 16,449-20,636 bp · − strandrpoC1 · gene · 20,809-23,620 bp · − strandrpoB · gene · 23,647-26,859 bp · − strandtrnC-GCA · gene · 28,000-28,070 bp · + strandpetN · gene · 28,231-28,320 bp · + strandpsbM · gene · 29,286-29,390 bp · − strandtrnD-GUC · gene · 29,909-29,982 bp · − strandtrnY-GUA · gene · 30,092-30,175 bp · − strandtrnE-UUC · gene · 30,258-30,330 bp · − strandtrnT-GGU · gene · 30,885-30,956 bp · + strandpsbD · gene · 32,144-33,205 bp · + strandpsbC · gene · 33,189-34,574 bp · + strandtrnS-UGA · gene · 34,820-34,912 bp · − strandpsbZ · gene · 35,251-35,439 bp · + strandtrnG-GCC · gene · 35,711-35,781 bp · + strandtrnfM-CAU · gene · 35,941-36,014 bp · − strandrps14 · gene · 36,159-36,461 bp · − strandpsaB · gene · 36,585-38,789 bp · − strandpsaA · gene · 38,815-41,067 bp · − strandpafI · gene · 41,845-43,791 bp · − strandtrnS-GGA · gene · 44,625-44,711 bp · + strandrps4 · gene · 44,998-45,603 bp · − strandtrnT-UGU · gene · 45,984-46,056 bp · − strandtrnL-UAA · gene · 46,716-47,289 bp · + strandtrnF-GAA · gene · 47,591-47,663 bp · + strandndhJ · gene · 48,300-48,776 bp · − strandndhK · gene · 48,887-49,564 bp · − strandndhC · gene · 49,616-49,978 bp · − strandtrnV-UAC · gene · 50,938-51,588 bp · − strandtrnM-CAU · gene · 51,769-51,841 bp · + strandatpE · gene · 52,052-52,453 bp · − strandatpB · gene · 52,450-53,940 bp · − strandrbcL · gene · 54,721-56,154 bp · + strandaccD · gene · 56,858-58,339 bp · + strandpsaI · gene · 58,811-58,921 bp · + strandpafII · gene · 59,368-59,922 bp · + strandcemA · gene · 60,578-61,267 bp · + strandpetA · gene · 61,481-62,443 bp · + strandpsbJ · gene · 63,476-63,598 bp · − strandpsbL · gene · 63,733-63,849 bp · − strandpsbF · gene · 63,873-63,992 bp · − strandpsbE · gene · 64,007-64,258 bp · − strandpetL · gene · 65,130-65,225 bp · + strandpetG · gene · 65,398-65,511 bp · + strandtrnW-CCA · gene · 65,632-65,705 bp · − strandtrnP-UGG · gene · 65,879-65,952 bp · − strandpsaJ · gene · 66,243-66,377 bp · + strandrpl33 · gene · 66,841-67,044 bp · + strandrps18 · gene · 67,215-67,520 bp · + strandrpl20 · gene · 67,753-68,139 bp · − strandrps12 · gene · 68,948-97,040 bp · − strandclpP1 · gene · 69,191-71,106 bp · − strandpsbB · gene · 71,558-73,084 bp · + strandpsbT · gene · 73,267-73,368 bp · + strandpbf1 · gene · 73,432-73,563 bp · − strandpsbH · gene · 73,669-73,890 bp · + strandpetB · gene · 74,016-75,393 bp · + strandpetD · gene · 75,581-76,767 bp · + strandrpoA · gene · 76,936-77,943 bp · − strandrps11 · gene · 78,014-78,430 bp · − strandrpl36 · gene · 78,540-78,653 bp · − strandinfA · gene · 78,749-78,982 bp · − strandrps8 · gene · 79,106-79,510 bp · − strandrpl14 · gene · 79,697-80,065 bp · − strandrpl16 · gene · 80,197-81,476 bp · − strandrps3 · gene · 81,568-82,230 bp · − strandrpl22 · gene · 82,215-82,682 bp · − strandrps19 · gene · 82,752-83,030 bp · − strandrpl2 · gene · 83,091-84,601 bp · − strandrpl23 · gene · 84,620-84,901 bp · − strandtrnI-CAU · gene · 85,067-85,140 bp · − strandycf2 · gene · 85,229-92,017 bp · + strandycf15 · gene · 92,108-92,356 bp · + strandtrnL-CAA · gene · 92,612-92,692 bp · − strandndhB · gene · 93,253-95,460 bp · − strandrps7 · gene · 95,726-96,193 bp · − strandtrnV-GAC · gene · 98,672-98,743 bp · + strandrrn16 · gene · 98,970-100,460 bp · + strandtrnI-GAU · gene · 100,759-101,776 bp · + strandtrnA-UGC · gene · 101,846-102,723 bp · + strandrrn23 · gene · 102,889-105,699 bp · + strandrrn4.5 · gene · 105,798-105,900 bp · + strandrrn5 · gene · 106,161-106,281 bp · + strandtrnR-ACG · gene · 106,525-106,598 bp · + strandtrnN-GUU · gene · 107,118-107,189 bp · − strandycf1 · gene · 107,518-108,648 bp · + strandndhF · gene · 108,542-110,773 bp · − strandrpl32 · gene · 111,258-111,428 bp · + strandtrnL-UAG · gene · 112,165-112,244 bp · + strandccsA · gene · 112,354-113,331 bp · + strandndhD · gene · 113,574-114,725 bp · − strandpsaC · gene · 115,196-115,441 bp · − strandndhE · gene · 115,682-115,987 bp · − strandndhG · gene · 116,216-116,746 bp · − strandndhI · gene · 117,139-117,645 bp · − strandndhA · gene · 117,726-119,805 bp · − strandndhH · gene · 119,807-120,988 bp · − strandrps15 · gene · 121,088-121,360 bp · − strandycf1 · gene · 121,773-127,328 bp · − strandtrnN-GUU · gene · 127,657-127,728 bp · + strandtrnR-ACG · gene · 128,248-128,321 bp · − strandrrn5 · gene · 128,565-128,685 bp · − strandrrn4.5 · gene · 128,946-129,048 bp · − strandrrn23 · gene · 129,147-131,957 bp · − strandtrnA-UGC · gene · 132,123-133,000 bp · − strandtrnI-GAU · gene · 133,070-134,087 bp · − strandrrn16 · gene · 134,386-135,876 bp · − strandtrnV-GAC · gene · 136,103-136,174 bp · − strandrps7 · gene · 138,653-139,120 bp · + strandndhB · gene · 139,386-141,593 bp · + strandtrnL-CAA · gene · 142,154-142,234 bp · + strandycf15 · gene · 142,490-142,738 bp · − strandycf2 · gene · 142,829-149,617 bp · − strandtrnI-CAU · gene · 149,706-149,779 bp · + strandrpl23 · gene · 149,945-150,226 bp · + strandrpl2 · gene · 150,245-151,755 bp · + strandSatureja montanaANNOTATED PLASTOMENC_066034.1151,858 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_066034.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108575
psbAgenephotosystem-ii−41114701059
trnK-UUUgenetranslation-rna−169042732583
matKgeneother−198335371554
rps16generibosomal-protein−482159651144
trnQ-UUGgenetranslation-rna−6924699672
psbKgenephotosystem-ii+73767562186
psbIgenephotosystem-ii+79558066111
trnS-GCUgenetranslation-rna−8217830588
trnG-UCCgenetranslation-rna+89969751755
trnR-UCUgenetranslation-rna+99321000472
atpAgeneatp-synthase−10110116341524
atpFgeneatp-synthase−11729129771248
atpHgeneatp-synthase−1325113497246
atpIgeneatp-synthase−1453515279744
rps2generibosomal-protein−1551216223711
rpoC2generna-polymerase−16448206364188
rpoC1generna-polymerase−20808236202812
rpoBgenerna-polymerase−23646268593213
trnC-GCAgenetranslation-rna+279992807071
petNgenecytochrome+282302832090
psbMgenephotosystem-ii−2928529390105
trnD-GUCgenetranslation-rna−299082998274
trnY-GUAgenetranslation-rna−300913017584
trnE-UUCgenetranslation-rna−302573033073
trnT-GGUgenetranslation-rna+308843095672
psbDgenephotosystem-ii+32143332051062
psbCgenephotosystem-ii+33188345741386
trnS-UGAgenetranslation-rna−348193491293
psbZgenephotosystem-ii+3525035439189
trnG-GCCgenetranslation-rna+357103578171
trnfM-CAUgenetranslation-rna−359403601474
rps14generibosomal-protein−3615836461303
psaBgenephotosystem-i−36584387892205
psaAgenephotosystem-i−38814410672253
pafIgeneother−41844437911947
trnS-GGAgenetranslation-rna+446244471187
rps4generibosomal-protein−4499745603606
trnT-UGUgenetranslation-rna−459834605673
trnL-UAAgenetranslation-rna+4671547289574
trnF-GAAgenetranslation-rna+475904766373
ndhJgenenad-dehydrogenase−4829948776477
ndhKgenenad-dehydrogenase−4888649564678
ndhCgenenad-dehydrogenase−4961549978363
trnV-UACgenetranslation-rna−5093751588651
trnM-CAUgenetranslation-rna+517685184173
atpEgeneatp-synthase−5205152453402
atpBgeneatp-synthase−52449539401491
rbcLgeneother+54720561541434
accDgeneother+56857583391482
psaIgenephotosystem-i+5881058921111
pafIIgeneother+5936759922555
cemAgeneother+6057761267690
petAgenecytochrome+6148062443963
psbJgenephotosystem-ii−6347563598123
psbLgenephotosystem-ii−6373263849117
psbFgenephotosystem-ii−6387263992120
psbEgenephotosystem-ii−6400664258252
petLgenecytochrome+651296522596
petGgenecytochrome+6539765511114
trnW-CCAgenetranslation-rna−656316570574
trnP-UGGgenetranslation-rna−658786595274
psaJgenephotosystem-i+6624266377135
rpl33generibosomal-protein+6684067044204
rps18generibosomal-protein+6721467520306
rpl20generibosomal-protein−6775268139387
rps12generibosomal-protein−689479704028093
clpP1geneother−69190711061916
psbBgenephotosystem-ii+71557730841527
psbTgenephotosystem-ii+7326673368102
pbf1geneother−7343173563132
psbHgenephotosystem-ii+7366873890222
petBgenecytochrome+74015753931378
petDgenecytochrome+75580767671187
rpoAgenerna-polymerase−76935779431008
rps11generibosomal-protein−7801378430417
rpl36generibosomal-protein−7853978653114
infAgeneother−7874878982234
rps8generibosomal-protein−7910579510405
rpl14generibosomal-protein−7969680065369
rpl16generibosomal-protein−80196814761280
rps3generibosomal-protein−8156782230663
rpl22generibosomal-protein−8221482682468
rps19generibosomal-protein−8275183030279
rpl2generibosomal-protein−83090846011511
rpl23generibosomal-protein−8461984901282
trnI-CAUgenetranslation-rna−850668514074
ycf2geneother+85228920176789
ycf15geneother+9210792356249
trnL-CAAgenetranslation-rna−926119269281
ndhBgenenad-dehydrogenase−93252954602208
rps7generibosomal-protein−9572596193468
trnV-GACgenetranslation-rna+986719874372
rrn16generibosomal-rna+989691004601491
trnI-GAUgenetranslation-rna+1007581017761018
trnA-UGCgenetranslation-rna+101845102723878
rrn23generibosomal-rna+1028881056992811
rrn4.5generibosomal-rna+105797105900103
rrn5generibosomal-rna+106160106281121
trnR-ACGgenetranslation-rna+10652410659874
trnN-GUUgenetranslation-rna−10711710718972
ycf1geneother+1075171086481131
ndhFgenenad-dehydrogenase−1085411107732232
rpl32generibosomal-protein+111257111428171
trnL-UAGgenetranslation-rna+11216411224480
ccsAgeneother+112353113331978
ndhDgenenad-dehydrogenase−1135731147251152
psaCgenephotosystem-i−115195115441246
ndhEgenenad-dehydrogenase−115681115987306
ndhGgenenad-dehydrogenase−116215116746531
ndhIgenenad-dehydrogenase−117138117645507
ndhAgenenad-dehydrogenase−1177251198052080
ndhHgenenad-dehydrogenase−1198061209881182
rps15generibosomal-protein−121087121360273
ycf1geneother−1217721273285556
trnN-GUUgenetranslation-rna+12765612772872
trnR-ACGgenetranslation-rna−12824712832174
rrn5generibosomal-rna−128564128685121
rrn4.5generibosomal-rna−128945129048103
rrn23generibosomal-rna−1291461319572811
trnA-UGCgenetranslation-rna−132122133000878
trnI-GAUgenetranslation-rna−1330691340871018
rrn16generibosomal-rna−1343851358761491
trnV-GACgenetranslation-rna−13610213617472
rps7generibosomal-protein+138652139120468
ndhBgenenad-dehydrogenase+1393851415932208
trnL-CAAgenetranslation-rna+14215314223481
ycf15geneother−142489142738249
ycf2geneother−1428281496176789
trnI-CAUgenetranslation-rna+14970514977974
rpl23generibosomal-protein+149944150226282
rpl2generibosomal-protein+1502441517551511

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources