Schnabelia aureoglandulosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
IR
IR
IR
IR
IR
IR
IR
IR
IR
IR
IR
IR
trnH-GUG · NC_088034.1 · 1–73 bp · −
psbA · NC_088034.1 · 391–1,449 bp · −
trnK-UUU · NC_088034.1 · 1,694–4,330 bp · −
matK · NC_088034.1 · 2,061–3,596 bp · −
rps16 · NC_088034.1 · 5,281–6,491 bp · −
trnQ-UUG · NC_088034.1 · 7,655–7,726 bp · −
trnS-GCU · NC_088034.1 · 8,866–8,953 bp · −
atpA · NC_088034.1 · 10,789–12,312 bp · −
atpF · NC_088034.1 · 12,411–13,663 bp · −
atpH · NC_088034.1 · 14,042–14,287 bp · −
atpI · NC_088034.1 · 15,239–15,982 bp · −
rps2 · NC_088034.1 · 16,208–16,918 bp · −
rpoC2 · NC_088034.1 · 17,168–21,307 bp · −
rpoC1 · NC_088034.1 · 21,468–24,306 bp · −
rpoB · NC_088034.1 · 24,333–27,545 bp · −
psbM · NC_088034.1 · 30,582–30,686 bp · −
trnD-GUC · NC_088034.1 · 31,201–31,274 bp · −
trnY-GUA · NC_088034.1 · 31,384–31,467 bp · −
trnE-UUC · NC_088034.1 · 31,540–31,612 bp · −
trnS-UGA · NC_088034.1 · 36,243–36,335 bp · −
trnfM-CAU · NC_088034.1 · 37,335–37,408 bp · −
rps14 · NC_088034.1 · 37,554–37,856 bp · −
psaB · NC_088034.1 · 37,971–40,175 bp · −
psaA · NC_088034.1 · 40,201–42,453 bp · −
ycf3 · NC_088034.1 · 43,190–45,137 bp · −
rps4 · NC_088034.1 · 46,105–46,710 bp · −
trnT-UGU · NC_088034.1 · 47,062–47,134 bp · −
ndhJ · NC_088034.1 · 49,512–49,988 bp · −
ndhK · NC_088034.1 · 50,103–50,780 bp · −
ndhC · NC_088034.1 · 50,835–51,197 bp · −
trnV-UAC · NC_088034.1 · 51,829–52,500 bp · −
atpE · NC_088034.1 · 52,953–53,354 bp · −
atpB · NC_088034.1 · 53,351–54,847 bp · −
psbJ · NC_088034.1 · 64,067–64,189 bp · −
psbL · NC_088034.1 · 64,331–64,447 bp · −
psbF · NC_088034.1 · 64,471–64,590 bp · −
psbE · NC_088034.1 · 64,605–64,856 bp · −
trnW-CCA · NC_088034.1 · 66,289–66,362 bp · −
trnP-GGG · NC_088034.1 · 66,534–66,607 bp · −
rpl20 · NC_088034.1 · 68,423–68,809 bp · −
rps12 · NC_088034.1 · 69,630–69,743 bp · −
rps12 · NC_088034.1 · 95,764–96,560 bp · −
clpP · NC_088034.1 · 69,875–71,842 bp · −
psbN · NC_088034.1 · 74,160–74,291 bp · −
rpoA · NC_088034.1 · 77,695–78,747 bp · −
rps11 · NC_088034.1 · 78,819–79,256 bp · −
rpl36 · NC_088034.1 · 79,343–79,456 bp · −
infA · NC_088034.1 · 79,561–79,794 bp · −
rps8 · NC_088034.1 · 79,917–80,327 bp · −
rpl14 · NC_088034.1 · 80,503–80,871 bp · −
rpl16 · NC_088034.1 · 80,998–82,203 bp · −
rps3 · NC_088034.1 · 82,387–83,037 bp · −
rpl22 · NC_088034.1 · 83,022–83,495 bp · −
rps19 · NC_088034.1 · 83,555–83,704 bp · −
rpl2 · NC_088034.1 · 83,894–85,394 bp · −
rpl23 · NC_088034.1 · 85,413–85,694 bp · −
trnI-CAU · NC_088034.1 · 85,860–85,933 bp · −
trnL-CAA · NC_088034.1 · 92,128–92,208 bp · −
ndhB · NC_088034.1 · 92,758–94,969 bp · −
rps7 · NC_088034.1 · 95,243–95,710 bp · −
trnN-GUU · NC_088034.1 · 106,629–106,700 bp · −
ndhF · NC_088034.1 · 115,299–117,536 bp · −
ndhD · NC_088034.1 · 120,047–121,357 bp · −
psaC · NC_088034.1 · 121,657–121,902 bp · −
ndhE · NC_088034.1 · 122,154–122,456 bp · −
ndhG · NC_088034.1 · 122,630–123,160 bp · −
ndhI · NC_088034.1 · 123,487–123,993 bp · −
ndhA · NC_088034.1 · 124,081–126,186 bp · −
ndhH · NC_088034.1 · 126,188–127,369 bp · −
rps15 · NC_088034.1 · 127,466–127,738 bp · −
ycf1 · NC_088034.1 · 128,146–133,377 bp · −
trnR-ACG · NC_088034.1 · 134,536–134,609 bp · −
rrn5S · NC_088034.1 · 134,860–134,980 bp · −
rrn4.5S · NC_088034.1 · 135,210–135,312 bp · −
rrn23S · NC_088034.1 · 135,413–138,229 bp · −
trnA-UGC · NC_088034.1 · 138,391–139,274 bp · −
trnI-GAU · NC_088034.1 · 139,339–140,360 bp · −
ycf68 · NC_088034.1 · 139,912–140,205 bp · −
rrn16S · NC_088034.1 · 140,659–142,149 bp · −
trnV-GAC · NC_088034.1 · 142,379–142,450 bp · −
ycf15 · NC_088034.1 · 148,808–148,915 bp · −
ycf2 · NC_088034.1 · 148,976–154,390 bp · −
psbK · NC_088034.1 · 8,074–8,265 bp · +
psbI · NC_088034.1 · 8,661–8,771 bp · +
trnG-UCC · NC_088034.1 · 9,640–10,416 bp · +
trnR-UCU · NC_088034.1 · 10,612–10,683 bp · +
trnC-GCA · NC_088034.1 · 28,719–28,789 bp · +
petN · NC_088034.1 · 29,525–29,614 bp · +
trnT-GGU · NC_088034.1 · 32,170–32,241 bp · +
psbD · NC_088034.1 · 33,568–34,629 bp · +
psbC · NC_088034.1 · 34,775–35,998 bp · +
psbZ · NC_088034.1 · 36,658–36,846 bp · +
trnG-GCC · NC_088034.1 · 37,116–37,186 bp · +
trnS-GGA · NC_088034.1 · 45,716–45,802 bp · +
trnL-UAA · NC_088034.1 · 47,874–48,450 bp · +
trnF-GAA · NC_088034.1 · 48,757–48,829 bp · +
trnM-CAU · NC_088034.1 · 52,681–52,753 bp · +
rbcL · NC_088034.1 · 55,638–57,101 bp · +
accD · NC_088034.1 · 57,777–59,153 bp · +
psaI · NC_088034.1 · 59,554–59,664 bp · +
ycf4 · NC_088034.1 · 60,084–60,638 bp · +
cemA · NC_088034.1 · 61,257–61,946 bp · +
petA · NC_088034.1 · 62,152–63,114 bp · +
petL · NC_088034.1 · 65,771–65,866 bp · +
petG · NC_088034.1 · 66,040–66,153 bp · +
psaJ · NC_088034.1 · 66,891–67,025 bp · +
rpl33 · NC_088034.1 · 67,504–67,704 bp · +
rps18 · NC_088034.1 · 67,880–68,185 bp · +
rps12 · NC_088034.1 · 144,063–144,859 bp · +
psbB · NC_088034.1 · 72,290–73,816 bp · +
psbT · NC_088034.1 · 73,992–74,099 bp · +
psbH · NC_088034.1 · 74,379–74,609 bp · +
petB · NC_088034.1 · 74,731–76,124 bp · +
petD · NC_088034.1 · 76,313–77,519 bp · +
ycf2 · NC_088034.1 · 86,233–91,647 bp · +
ycf15 · NC_088034.1 · 91,708–91,815 bp · +
trnV-GAC · NC_088034.1 · 98,173–98,244 bp · +
rrn16S · NC_088034.1 · 98,474–99,964 bp · +
trnI-GAU · NC_088034.1 · 100,263–101,284 bp · +
trnA-UGC · NC_088034.1 · 101,349–102,232 bp · +
rrn23S · NC_088034.1 · 102,394–105,210 bp · +
rrn4.5S · NC_088034.1 · 105,311–105,413 bp · +
rrn5S · NC_088034.1 · 105,643–105,763 bp · +
trnR-ACG · NC_088034.1 · 106,014–106,087 bp · +
ycf1 · NC_088034.1 · 107,246–112,477 bp · +
rps15 · NC_088034.1 · 112,885–113,157 bp · +
ndhH · NC_088034.1 · 113,254–114,435 bp · +
rpl32 · NC_088034.1 · 118,055–118,213 bp · +
trnL-UAG · NC_088034.1 · 118,674–118,753 bp · +
ccsA · NC_088034.1 · 118,849–119,829 bp · +
trnN-GUU · NC_088034.1 · 133,923–133,994 bp · +
rps7 · NC_088034.1 · 144,913–145,380 bp · +
ndhB · NC_088034.1 · 145,654–147,865 bp · +
trnL-CAA · NC_088034.1 · 148,415–148,495 bp · +
trnI-CAU · NC_088034.1 · 154,690–154,763 bp · +
rpl23 · NC_088034.1 · 154,929–155,210 bp · +
rpl2 · NC_088034.1 · 155,229–156,729 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Schnabelia aureoglandulosa
ANNOTATED PLASTOME
NC_088034.1
156,866 bp · 136 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 39216 78433 117650 156866 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rps15 ndhH rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-GGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU ycf68 rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
137 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 1 73 73 Locate
psbA gene − 391 1449 1059 Locate
trnK-UUU gene − 1694 4330 2637 Locate
matK gene − 2061 3596 1536 Locate
rps16 gene − 5281 6491 1211 Locate
trnQ-UUG gene − 7655 7726 72 Locate
psbK gene + 8074 8265 192 Locate
psbI gene + 8661 8771 111 Locate
trnS-GCU gene − 8866 8953 88 Locate
trnG-UCC gene + 9640 10416 777 Locate
trnR-UCU gene + 10612 10683 72 Locate
atpA gene − 10789 12312 1524 Locate
atpF gene − 12411 13663 1253 Locate
atpH gene − 14042 14287 246 Locate
atpI gene − 15239 15982 744 Locate
rps2 gene − 16208 16918 711 Locate
rpoC2 gene − 17168 21307 4140 Locate
rpoC1 gene − 21468 24306 2839 Locate
rpoB gene − 24333 27545 3213 Locate
trnC-GCA gene + 28719 28789 71 Locate
petN gene + 29525 29614 90 Locate
psbM gene − 30582 30686 105 Locate
trnD-GUC gene − 31201 31274 74 Locate
trnY-GUA gene − 31384 31467 84 Locate
trnE-UUC gene − 31540 31612 73 Locate
trnT-GGU gene + 32170 32241 72 Locate
psbD gene + 33568 34629 1062 Locate
psbC gene + 34775 35998 1224 Locate
trnS-UGA gene − 36243 36335 93 Locate
psbZ gene + 36658 36846 189 Locate
trnG-GCC gene + 37116 37186 71 Locate
trnfM-CAU gene − 37335 37408 74 Locate
rps14 gene − 37554 37856 303 Locate
psaB gene − 37971 40175 2205 Locate
psaA gene − 40201 42453 2253 Locate
ycf3 gene − 43190 45137 1948 Locate
trnS-GGA gene + 45716 45802 87 Locate
rps4 gene − 46105 46710 606 Locate
trnT-UGU gene − 47062 47134 73 Locate
trnL-UAA gene + 47874 48450 577 Locate
trnF-GAA gene + 48757 48829 73 Locate
ndhJ gene − 49512 49988 477 Locate
ndhK gene − 50103 50780 678 Locate
ndhC gene − 50835 51197 363 Locate
trnV-UAC gene − 51829 52500 672 Locate
trnM-CAU gene + 52681 52753 73 Locate
atpE gene − 52953 53354 402 Locate
atpB gene − 53351 54847 1497 Locate
rbcL gene + 55638 57101 1464 Locate
accD gene + 57777 59153 1377 Locate
psaI gene + 59554 59664 111 Locate
ycf4 gene + 60084 60638 555 Locate
cemA gene + 61257 61946 690 Locate
petA gene + 62152 63114 963 Locate
psbJ gene − 64067 64189 123 Locate
psbL gene − 64331 64447 117 Locate
psbF gene − 64471 64590 120 Locate
psbE gene − 64605 64856 252 Locate
petL gene + 65771 65866 96 Locate
petG gene + 66040 66153 114 Locate
trnW-CCA gene − 66289 66362 74 Locate
trnP-GGG gene − 66534 66607 74 Locate
psaJ gene + 66891 67025 135 Locate
rpl33 gene + 67504 67704 201 Locate
rps18 gene + 67880 68185 306 Locate
rpl20 gene − 68423 68809 387 Locate
rps12 gene − 69630 69743 114 Locate
clpP gene − 69875 71842 1968 Locate
psbB gene + 72290 73816 1527 Locate
psbT gene + 73992 74099 108 Locate
psbN gene − 74160 74291 132 Locate
psbH gene + 74379 74609 231 Locate
petB gene + 74731 76124 1394 Locate
petD gene + 76313 77519 1207 Locate
rpoA gene − 77695 78747 1053 Locate
rps11 gene − 78819 79256 438 Locate
rpl36 gene − 79343 79456 114 Locate
infA gene − 79561 79794 234 Locate
rps8 gene − 79917 80327 411 Locate
rpl14 gene − 80503 80871 369 Locate
rpl16 gene − 80998 82203 1206 Locate
rps3 gene − 82387 83037 651 Locate
rpl22 gene − 83022 83495 474 Locate
rps19 gene − 83555 83704 150 Locate
rpl2 gene − 83894 85394 1501 Locate
rpl23 gene − 85413 85694 282 Locate
trnI-CAU gene − 85860 85933 74 Locate
ycf2 gene + 86233 91647 5415 Locate
ycf15 gene + 91708 91815 108 Locate
trnL-CAA gene − 92128 92208 81 Locate
ndhB gene − 92758 94969 2212 Locate
rps7 gene − 95243 95710 468 Locate
rps12 gene − 95764 96560 797 Locate
trnV-GAC gene + 98173 98244 72 Locate
rrn16S gene + 98474 99964 1491 Locate
trnI-GAU gene + 100263 101284 1022 Locate
trnA-UGC gene + 101349 102232 884 Locate
rrn23S gene + 102394 105210 2817 Locate
rrn4.5S gene + 105311 105413 103 Locate
rrn5S gene + 105643 105763 121 Locate
trnR-ACG gene + 106014 106087 74 Locate
trnN-GUU gene − 106629 106700 72 Locate
ycf1 gene + 107246 112477 5232 Locate
rps15 gene + 112885 113157 273 Locate
ndhH gene + 113254 114435 1182 Locate
ndhF gene − 115299 117536 2238 Locate
rpl32 gene + 118055 118213 159 Locate
trnL-UAG gene + 118674 118753 80 Locate
ccsA gene + 118849 119829 981 Locate
ndhD gene − 120047 121357 1311 Locate
psaC gene − 121657 121902 246 Locate
ndhE gene − 122154 122456 303 Locate
ndhG gene − 122630 123160 531 Locate
ndhI gene − 123487 123993 507 Locate
ndhA gene − 124081 126186 2106 Locate
ndhH gene − 126188 127369 1182 Locate
rps15 gene − 127466 127738 273 Locate
ycf1 gene − 128146 133377 5232 Locate
trnN-GUU gene + 133923 133994 72 Locate
trnR-ACG gene − 134536 134609 74 Locate
rrn5S gene − 134860 134980 121 Locate
rrn4.5S gene − 135210 135312 103 Locate
rrn23S gene − 135413 138229 2817 Locate
trnA-UGC gene − 138391 139274 884 Locate
trnI-GAU gene − 139339 140360 1022 Locate
ycf68 gene − 139912 140205 294 Locate
rrn16S gene − 140659 142149 1491 Locate
trnV-GAC gene − 142379 142450 72 Locate
rps12 gene + 144063 144859 797 Locate
rps7 gene + 144913 145380 468 Locate
ndhB gene + 145654 147865 2212 Locate
trnL-CAA gene + 148415 148495 81 Locate
ycf15 gene − 148808 148915 108 Locate
ycf2 gene − 148976 154390 5415 Locate
trnI-CAU gene + 154690 154763 74 Locate
rpl23 gene + 154929 155210 282 Locate
rpl2 gene + 155229 156729 1501 Locate
Status Available
Accession NC_088034.1
Length 156,866 bp
GC content 37.8%
Annotated genes 136
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 16 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 13 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 14
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources