Scutellaria albida subsp. condensata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
SSC
IR
trnH-GUG · MW420937.1 · 4–77 bp · −
psbA · MW420937.1 · 393–1,451 bp · −
trnK-UUU · MW420937.1 · 1,697–4,286 bp · −
matK · MW420937.1 · 1,982–3,526 bp · −
rps16 · MW420937.1 · 5,195–6,369 bp · −
trnQ-UUC · MW420937.1 · 7,481–7,552 bp · −
trnS-GCU · MW420937.1 · 8,671–8,758 bp · −
atpA · MW420937.1 · 10,540–12,063 bp · −
atpF · MW420937.1 · 12,148–13,376 bp · −
atpH · MW420937.1 · 13,749–13,994 bp · −
atpI · MW420937.1 · 14,988–15,731 bp · −
rps2 · MW420937.1 · 16,079–16,789 bp · −
rpoC2 · MW420937.1 · 17,007–21,206 bp · −
rpoC1 · MW420937.1 · 21,361–24,181 bp · −
rpoB · MW420937.1 · 24,208–27,420 bp · −
psbM · MW420937.1 · 30,482–30,586 bp · −
trnD-GUC · MW420937.1 · 31,118–31,191 bp · −
trnY-GUA · MW420937.1 · 31,305–31,388 bp · −
trnE-UUC · MW420937.1 · 31,448–31,520 bp · −
trnS-UCA · MW420937.1 · 36,161–36,253 bp · −
trnfM-CAU · MW420937.1 · 37,249–37,322 bp · −
rps14 · MW420937.1 · 37,472–37,774 bp · −
psaB · MW420937.1 · 37,903–40,107 bp · −
psaA · MW420937.1 · 40,133–42,385 bp · −
ycf3 · MW420937.1 · 43,066–44,994 bp · −
rps4 · MW420937.1 · 46,239–46,844 bp · −
trnT-UGU · MW420937.1 · 47,186–47,258 bp · −
ndhJ · MW420937.1 · 49,520–49,996 bp · −
ndhK · MW420937.1 · 50,101–50,778 bp · −
ndhC · MW420937.1 · 50,831–51,193 bp · −
trnV-UAC · MW420937.1 · 52,182–52,840 bp · −
atpE · MW420937.1 · 53,302–53,703 bp · −
atpB · MW420937.1 · 53,700–55,196 bp · −
psbJ · MW420937.1 · 64,358–64,480 bp · −
psbL · MW420937.1 · 64,614–64,730 bp · −
psbF · MW420937.1 · 64,754–64,873 bp · −
psbE · MW420937.1 · 64,888–65,139 bp · −
trnW-CCA · MW420937.1 · 66,555–66,628 bp · −
trnP-UGG · MW420937.1 · 66,798–66,871 bp · −
rpl20 · MW420937.1 · 68,673–69,059 bp · −
rps12 · MW420937.1 · 69,843–69,968 bp · −
rps12 · MW420937.1 · 97,165–97,955 bp · −
clpP · MW420937.1 · 70,110–72,046 bp · −
psbN · MW420937.1 · 74,374–74,505 bp · −
rpoA · MW420937.1 · 77,886–78,899 bp · −
rps11 · MW420937.1 · 78,971–79,387 bp · −
rpl36 · MW420937.1 · 79,489–79,602 bp · −
infA · MW420937.1 · 79,698–79,931 bp · −
rps8 · MW420937.1 · 80,054–80,464 bp · −
rpl14 · MW420937.1 · 80,628–80,996 bp · −
rpl16 · MW420937.1 · 81,123–82,353 bp · −
rps3 · MW420937.1 · 82,508–83,170 bp · −
rpl22 · MW420937.1 · 83,172–83,627 bp · −
rps19 · MW420937.1 · 83,687–83,965 bp · −
rpl2 · MW420937.1 · 84,022–85,504 bp · −
rpl23 · MW420937.1 · 85,523–85,804 bp · −
trnI-CAU · MW420937.1 · 85,964–86,037 bp · −
trnL-CAA · MW420937.1 · 93,535–93,615 bp · −
ndhB · MW420937.1 · 94,158–96,369 bp · −
rps7 · MW420937.1 · 96,644–97,111 bp · −
ndhF · MW420937.1 · 109,146–111,386 bp · −
ndhD · MW420937.1 · 113,820–115,349 bp · −
psaC · MW420937.1 · 115,456–115,701 bp · −
ndhE · MW420937.1 · 115,957–116,262 bp · −
ndhG · MW420937.1 · 116,486–117,016 bp · −
ndhI · MW420937.1 · 117,365–117,865 bp · −
ndhA · MW420937.1 · 117,946–120,055 bp · −
ndhH · MW420937.1 · 120,057–121,238 bp · −
rps15 · MW420937.1 · 121,335–121,607 bp · −
ycf1 · MW420937.1 · 121,876–127,389 bp · −
trnR-ACC · MW420937.1 · 128,391–128,464 bp · −
rrn5 · MW420937.1 · 128,699–128,819 bp · −
rrn4.5 · MW420937.1 · 129,067–129,169 bp · −
rrn23 · MW420937.1 · 129,268–132,079 bp · −
trnA-UGC · MW420937.1 · 132,249–133,139 bp · −
trnI-GAU · MW420937.1 · 133,205–134,222 bp · −
rrn16 · MW420937.1 · 134,521–136,011 bp · −
trnV-GAC · MW420937.1 · 136,234–136,305 bp · −
ycf15 · MW420937.1 · 142,559–142,756 bp · −
ycf2 · MW420937.1 · 142,898–149,707 bp · −
psbK · MW420937.1 · 7,877–8,062 bp · +
psbI · MW420937.1 · 8,462–8,572 bp · +
trnG-UCC · MW420937.1 · 9,453–10,206 bp · +
trnR-UCU · MW420937.1 · 10,372–10,443 bp · +
trnC-GCA · MW420937.1 · 28,597–28,667 bp · +
petN · MW420937.1 · 29,403–29,492 bp · +
trnT-GGU · MW420937.1 · 32,092–32,163 bp · +
psbD · MW420937.1 · 33,497–34,558 bp · +
psbC · MW420937.1 · 34,506–35,927 bp · +
psbZ · MW420937.1 · 36,573–36,761 bp · +
trnG-GCC · MW420937.1 · 37,034–37,104 bp · +
trnS-GGA · MW420937.1 · 45,868–45,954 bp · +
trnL-UAA · MW420937.1 · 47,926–48,493 bp · +
trnF-GAA · MW420937.1 · 48,798–48,870 bp · +
trnM-CAU · MW420937.1 · 53,021–53,093 bp · +
rbcL · MW420937.1 · 55,965–57,407 bp · +
accD · MW420937.1 · 58,133–59,623 bp · +
psaI · MW420937.1 · 59,861–59,971 bp · +
ycf4 · MW420937.1 · 60,405–60,959 bp · +
cemA · MW420937.1 · 61,513–62,172 bp · +
petA · MW420937.1 · 62,379–63,341 bp · +
petL · MW420937.1 · 66,062–66,157 bp · +
petG · MW420937.1 · 66,333–66,446 bp · +
psaJ · MW420937.1 · 67,144–67,278 bp · +
rpl33 · MW420937.1 · 67,752–67,952 bp · +
rps18 · MW420937.1 · 68,127–68,432 bp · +
rps12 · MW420937.1 · 137,878–138,668 bp · +
psbB · MW420937.1 · 72,500–74,026 bp · +
psbT · MW420937.1 · 74,206–74,313 bp · +
psbH · MW420937.1 · 74,609–74,830 bp · +
petB · MW420937.1 · 74,955–76,323 bp · +
petD · MW420937.1 · 76,512–77,723 bp · +
ycf2 · MW420937.1 · 86,126–92,935 bp · +
ycf15 · MW420937.1 · 93,077–93,274 bp · +
trnV-GAC · MW420937.1 · 99,528–99,599 bp · +
rrn16 · MW420937.1 · 99,822–101,312 bp · +
trnI-GAU · MW420937.1 · 101,611–102,628 bp · +
trnA-UGC · MW420937.1 · 102,694–103,584 bp · +
rrn23 · MW420937.1 · 103,754–106,565 bp · +
rrn4.5 · MW420937.1 · 106,664–106,766 bp · +
rrn5 · MW420937.1 · 107,014–107,134 bp · +
trnR-ACC · MW420937.1 · 107,369–107,442 bp · +
trnN-GUU · MW420937.1 · 107,998–108,069 bp · +
rpl32 · MW420937.1 · 111,834–112,010 bp · +
trnL-UAG · MW420937.1 · 112,445–112,524 bp · +
ccsA · MW420937.1 · 112,608–113,582 bp · +
trnN-GUU · MW420937.1 · 127,764–127,835 bp · +
rps7 · MW420937.1 · 138,722–139,189 bp · +
ndhB · MW420937.1 · 139,464–141,675 bp · +
trnL-CAA · MW420937.1 · 142,218–142,298 bp · +
trnI-CAU · MW420937.1 · 149,796–149,869 bp · +
rpl23 · MW420937.1 · 150,029–150,310 bp · +
rpl2 · MW420937.1 · 150,329–151,811 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria albida subsp. condensata
ANNOTATED PLASTOME
MW420937.1
151,908 bp · 132 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37977 75954 113931 151908 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACC trnN-GUU rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUC trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UCA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACC rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 4 77 74 Locate
psbA gene − 393 1451 1059 Locate
trnK-UUU gene − 1697 4286 2590 Locate
matK gene − 1982 3526 1545 Locate
rps16 gene − 5195 6369 1175 Locate
trnQ-UUC gene − 7481 7552 72 Locate
psbK gene + 7877 8062 186 Locate
psbI gene + 8462 8572 111 Locate
trnS-GCU gene − 8671 8758 88 Locate
trnG-UCC gene + 9453 10206 754 Locate
trnR-UCU gene + 10372 10443 72 Locate
atpA gene − 10540 12063 1524 Locate
atpF gene − 12148 13376 1229 Locate
atpH gene − 13749 13994 246 Locate
atpI gene − 14988 15731 744 Locate
rps2 gene − 16079 16789 711 Locate
rpoC2 gene − 17007 21206 4200 Locate
rpoC1 gene − 21361 24181 2821 Locate
rpoB gene − 24208 27420 3213 Locate
trnC-GCA gene + 28597 28667 71 Locate
petN gene + 29403 29492 90 Locate
psbM gene − 30482 30586 105 Locate
trnD-GUC gene − 31118 31191 74 Locate
trnY-GUA gene − 31305 31388 84 Locate
trnE-UUC gene − 31448 31520 73 Locate
trnT-GGU gene + 32092 32163 72 Locate
psbD gene + 33497 34558 1062 Locate
psbC gene + 34506 35927 1422 Locate
trnS-UCA gene − 36161 36253 93 Locate
psbZ gene + 36573 36761 189 Locate
trnG-GCC gene + 37034 37104 71 Locate
trnfM-CAU gene − 37249 37322 74 Locate
rps14 gene − 37472 37774 303 Locate
psaB gene − 37903 40107 2205 Locate
psaA gene − 40133 42385 2253 Locate
ycf3 gene − 43066 44994 1929 Locate
trnS-GGA gene + 45868 45954 87 Locate
rps4 gene − 46239 46844 606 Locate
trnT-UGU gene − 47186 47258 73 Locate
trnL-UAA gene + 47926 48493 568 Locate
trnF-GAA gene + 48798 48870 73 Locate
ndhJ gene − 49520 49996 477 Locate
ndhK gene − 50101 50778 678 Locate
ndhC gene − 50831 51193 363 Locate
trnV-UAC gene − 52182 52840 659 Locate
trnM-CAU gene + 53021 53093 73 Locate
atpE gene − 53302 53703 402 Locate
atpB gene − 53700 55196 1497 Locate
rbcL gene + 55965 57407 1443 Locate
accD gene + 58133 59623 1491 Locate
psaI gene + 59861 59971 111 Locate
ycf4 gene + 60405 60959 555 Locate
cemA gene + 61513 62172 660 Locate
petA gene + 62379 63341 963 Locate
psbJ gene − 64358 64480 123 Locate
psbL gene − 64614 64730 117 Locate
psbF gene − 64754 64873 120 Locate
psbE gene − 64888 65139 252 Locate
petL gene + 66062 66157 96 Locate
petG gene + 66333 66446 114 Locate
trnW-CCA gene − 66555 66628 74 Locate
trnP-UGG gene − 66798 66871 74 Locate
psaJ gene + 67144 67278 135 Locate
rpl33 gene + 67752 67952 201 Locate
rps18 gene + 68127 68432 306 Locate
rpl20 gene − 68673 69059 387 Locate
rps12 gene − 69843 69968 126 Locate
clpP gene − 70110 72046 1937 Locate
psbB gene + 72500 74026 1527 Locate
psbT gene + 74206 74313 108 Locate
psbN gene − 74374 74505 132 Locate
psbH gene + 74609 74830 222 Locate
petB gene + 74955 76323 1369 Locate
petD gene + 76512 77723 1212 Locate
rpoA gene − 77886 78899 1014 Locate
rps11 gene − 78971 79387 417 Locate
rpl36 gene − 79489 79602 114 Locate
infA gene − 79698 79931 234 Locate
rps8 gene − 80054 80464 411 Locate
rpl14 gene − 80628 80996 369 Locate
rpl16 gene − 81123 82353 1231 Locate
rps3 gene − 82508 83170 663 Locate
rpl22 gene − 83172 83627 456 Locate
rps19 gene − 83687 83965 279 Locate
rpl2 gene − 84022 85504 1483 Locate
rpl23 gene − 85523 85804 282 Locate
trnI-CAU gene − 85964 86037 74 Locate
ycf2 gene + 86126 92935 6810 Locate
ycf15 gene + 93077 93274 198 Locate
trnL-CAA gene − 93535 93615 81 Locate
ndhB gene − 94158 96369 2212 Locate
rps7 gene − 96644 97111 468 Locate
rps12 gene − 97165 97955 791 Locate
trnV-GAC gene + 99528 99599 72 Locate
rrn16 gene + 99822 101312 1491 Locate
trnI-GAU gene + 101611 102628 1018 Locate
trnA-UGC gene + 102694 103584 891 Locate
rrn23 gene + 103754 106565 2812 Locate
rrn4.5 gene + 106664 106766 103 Locate
rrn5 gene + 107014 107134 121 Locate
trnR-ACC gene + 107369 107442 74 Locate
trnN-GUU gene + 107998 108069 72 Locate
ndhF gene − 109146 111386 2241 Locate
rpl32 gene + 111834 112010 177 Locate
trnL-UAG gene + 112445 112524 80 Locate
ccsA gene + 112608 113582 975 Locate
ndhD gene − 113820 115349 1530 Locate
psaC gene − 115456 115701 246 Locate
ndhE gene − 115957 116262 306 Locate
ndhG gene − 116486 117016 531 Locate
ndhI gene − 117365 117865 501 Locate
ndhA gene − 117946 120055 2110 Locate
ndhH gene − 120057 121238 1182 Locate
rps15 gene − 121335 121607 273 Locate
ycf1 gene − 121876 127389 5514 Locate
trnN-GUU gene + 127764 127835 72 Locate
trnR-ACC gene − 128391 128464 74 Locate
rrn5 gene − 128699 128819 121 Locate
rrn4.5 gene − 129067 129169 103 Locate
rrn23 gene − 129268 132079 2812 Locate
trnA-UGC gene − 132249 133139 891 Locate
trnI-GAU gene − 133205 134222 1018 Locate
rrn16 gene − 134521 136011 1491 Locate
trnV-GAC gene − 136234 136305 72 Locate
rps12 gene + 137878 138668 791 Locate
rps7 gene + 138722 139189 468 Locate
ndhB gene + 139464 141675 2212 Locate
trnL-CAA gene + 142218 142298 81 Locate
ycf15 gene − 142559 142756 198 Locate
ycf2 gene − 142898 149707 6810 Locate
trnI-CAU gene + 149796 149869 74 Locate
rpl23 gene + 150029 150310 282 Locate
rpl2 gene + 150329 151811 1483 Locate
Status Available
Accession MW420937.1
Length 151,908 bp
GC content 38.3%
Annotated genes 132
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources