Coordinate-aware organelle record

Scutellaria albida subsp. condensata chloroplast genome

Available MW420937.1 151,908 bp 132 coordinate-linked features
IRSSCIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 4-77 bp · − strandpsbA · gene · 393-1,451 bp · − strandtrnK-UUU · gene · 1,697-4,286 bp · − strandmatK · gene · 1,982-3,526 bp · − strandrps16 · gene · 5,195-6,369 bp · − strandtrnQ-UUC · gene · 7,481-7,552 bp · − strandpsbK · gene · 7,877-8,062 bp · + strandpsbI · gene · 8,462-8,572 bp · + strandtrnS-GCU · gene · 8,671-8,758 bp · − strandtrnG-UCC · gene · 9,453-10,206 bp · + strandtrnR-UCU · gene · 10,372-10,443 bp · + strandatpA · gene · 10,540-12,063 bp · − strandatpF · gene · 12,148-13,376 bp · − strandatpH · gene · 13,749-13,994 bp · − strandatpI · gene · 14,988-15,731 bp · − strandrps2 · gene · 16,079-16,789 bp · − strandrpoC2 · gene · 17,007-21,206 bp · − strandrpoC1 · gene · 21,361-24,181 bp · − strandrpoB · gene · 24,208-27,420 bp · − strandtrnC-GCA · gene · 28,597-28,667 bp · + strandpetN · gene · 29,403-29,492 bp · + strandpsbM · gene · 30,482-30,586 bp · − strandtrnD-GUC · gene · 31,118-31,191 bp · − strandtrnY-GUA · gene · 31,305-31,388 bp · − strandtrnE-UUC · gene · 31,448-31,520 bp · − strandtrnT-GGU · gene · 32,092-32,163 bp · + strandpsbD · gene · 33,497-34,558 bp · + strandpsbC · gene · 34,506-35,927 bp · + strandtrnS-UCA · gene · 36,161-36,253 bp · − strandpsbZ · gene · 36,573-36,761 bp · + strandtrnG-GCC · gene · 37,034-37,104 bp · + strandtrnfM-CAU · gene · 37,249-37,322 bp · − strandrps14 · gene · 37,472-37,774 bp · − strandpsaB · gene · 37,903-40,107 bp · − strandpsaA · gene · 40,133-42,385 bp · − strandycf3 · gene · 43,066-44,994 bp · − strandtrnS-GGA · gene · 45,868-45,954 bp · + strandrps4 · gene · 46,239-46,844 bp · − strandtrnT-UGU · gene · 47,186-47,258 bp · − strandtrnL-UAA · gene · 47,926-48,493 bp · + strandtrnF-GAA · gene · 48,798-48,870 bp · + strandndhJ · gene · 49,520-49,996 bp · − strandndhK · gene · 50,101-50,778 bp · − strandndhC · gene · 50,831-51,193 bp · − strandtrnV-UAC · gene · 52,182-52,840 bp · − strandtrnM-CAU · gene · 53,021-53,093 bp · + strandatpE · gene · 53,302-53,703 bp · − strandatpB · gene · 53,700-55,196 bp · − strandrbcL · gene · 55,965-57,407 bp · + strandaccD · gene · 58,133-59,623 bp · + strandpsaI · gene · 59,861-59,971 bp · + strandycf4 · gene · 60,405-60,959 bp · + strandcemA · gene · 61,513-62,172 bp · + strandpetA · gene · 62,379-63,341 bp · + strandpsbJ · gene · 64,358-64,480 bp · − strandpsbL · gene · 64,614-64,730 bp · − strandpsbF · gene · 64,754-64,873 bp · − strandpsbE · gene · 64,888-65,139 bp · − strandpetL · gene · 66,062-66,157 bp · + strandpetG · gene · 66,333-66,446 bp · + strandtrnW-CCA · gene · 66,555-66,628 bp · − strandtrnP-UGG · gene · 66,798-66,871 bp · − strandpsaJ · gene · 67,144-67,278 bp · + strandrpl33 · gene · 67,752-67,952 bp · + strandrps18 · gene · 68,127-68,432 bp · + strandrpl20 · gene · 68,673-69,059 bp · − strandrps12 · gene · 69,843-97,955 bp · − strandrps12 · gene · 69,843-138,668 bp · + strandclpP · gene · 70,110-72,046 bp · − strandpsbB · gene · 72,500-74,026 bp · + strandpsbT · gene · 74,206-74,313 bp · + strandpsbN · gene · 74,374-74,505 bp · − strandpsbH · gene · 74,609-74,830 bp · + strandpetB · gene · 74,955-76,323 bp · + strandpetD · gene · 76,512-77,723 bp · + strandrpoA · gene · 77,886-78,899 bp · − strandrps11 · gene · 78,971-79,387 bp · − strandrpl36 · gene · 79,489-79,602 bp · − strandinfA · gene · 79,698-79,931 bp · − strandrps8 · gene · 80,054-80,464 bp · − strandrpl14 · gene · 80,628-80,996 bp · − strandrpl16 · gene · 81,123-82,353 bp · − strandrps3 · gene · 82,508-83,170 bp · − strandrpl22 · gene · 83,172-83,627 bp · − strandrps19 · gene · 83,687-83,965 bp · − strandrpl2 · gene · 84,022-85,504 bp · − strandrpl23 · gene · 85,523-85,804 bp · − strandtrnI-CAU · gene · 85,964-86,037 bp · − strandycf2 · gene · 86,126-92,935 bp · + strandycf15 · gene · 93,077-93,274 bp · + strandtrnL-CAA · gene · 93,535-93,615 bp · − strandndhB · gene · 94,158-96,369 bp · − strandrps7 · gene · 96,644-97,111 bp · − strandtrnV-GAC · gene · 99,528-99,599 bp · + strandrrn16 · gene · 99,822-101,312 bp · + strandtrnI-GAU · gene · 101,611-102,628 bp · + strandtrnA-UGC · gene · 102,694-103,584 bp · + strandrrn23 · gene · 103,754-106,565 bp · + strandrrn4.5 · gene · 106,664-106,766 bp · + strandrrn5 · gene · 107,014-107,134 bp · + strandtrnR-ACC · gene · 107,369-107,442 bp · + strandtrnN-GUU · gene · 107,998-108,069 bp · + strandndhF · gene · 109,146-111,386 bp · − strandrpl32 · gene · 111,834-112,010 bp · + strandtrnL-UAG · gene · 112,445-112,524 bp · + strandccsA · gene · 112,608-113,582 bp · + strandndhD · gene · 113,820-115,349 bp · − strandpsaC · gene · 115,456-115,701 bp · − strandndhE · gene · 115,957-116,262 bp · − strandndhG · gene · 116,486-117,016 bp · − strandndhI · gene · 117,365-117,865 bp · − strandndhA · gene · 117,946-120,055 bp · − strandndhH · gene · 120,057-121,238 bp · − strandrps15 · gene · 121,335-121,607 bp · − strandycf1 · gene · 121,876-127,389 bp · − strandtrnN-GUU · gene · 127,764-127,835 bp · + strandtrnR-ACC · gene · 128,391-128,464 bp · − strandrrn5 · gene · 128,699-128,819 bp · − strandrrn4.5 · gene · 129,067-129,169 bp · − strandrrn23 · gene · 129,268-132,079 bp · − strandtrnA-UGC · gene · 132,249-133,139 bp · − strandtrnI-GAU · gene · 133,205-134,222 bp · − strandrrn16 · gene · 134,521-136,011 bp · − strandtrnV-GAC · gene · 136,234-136,305 bp · − strandrps7 · gene · 138,722-139,189 bp · + strandndhB · gene · 139,464-141,675 bp · + strandtrnL-CAA · gene · 142,218-142,298 bp · + strandycf15 · gene · 142,559-142,756 bp · − strandycf2 · gene · 142,898-149,707 bp · − strandtrnI-CAU · gene · 149,796-149,869 bp · + strandrpl23 · gene · 150,029-150,310 bp · + strandrpl2 · gene · 150,329-151,811 bp · + strandScutellaria albida subsp. condensataANNOTATED PLASTOMEMW420937.1151,908 bp · 132 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: MW420937.1Features: 132 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−37774
psbAgenephotosystem-ii−39214511059
trnK-UUUgenetranslation-rna−169642862590
matKgeneother−198135261545
rps16generibosomal-protein−519463691175
trnQ-UUCgenetranslation-rna−7480755272
psbKgenephotosystem-ii+78768062186
psbIgenephotosystem-ii+84618572111
trnS-GCUgenetranslation-rna−8670875888
trnG-UCCgenetranslation-rna+945210206754
trnR-UCUgenetranslation-rna+103711044372
atpAgeneatp-synthase−10539120631524
atpFgeneatp-synthase−12147133761229
atpHgeneatp-synthase−1374813994246
atpIgeneatp-synthase−1498715731744
rps2generibosomal-protein−1607816789711
rpoC2generna-polymerase−17006212064200
rpoC1generna-polymerase−21360241812821
rpoBgenerna-polymerase−24207274203213
trnC-GCAgenetranslation-rna+285962866771
petNgenecytochrome+294022949290
psbMgenephotosystem-ii−3048130586105
trnD-GUCgenetranslation-rna−311173119174
trnY-GUAgenetranslation-rna−313043138884
trnE-UUCgenetranslation-rna−314473152073
trnT-GGUgenetranslation-rna+320913216372
psbDgenephotosystem-ii+33496345581062
psbCgenephotosystem-ii+34505359271422
trnS-UCAgenetranslation-rna−361603625393
psbZgenephotosystem-ii+3657236761189
trnG-GCCgenetranslation-rna+370333710471
trnfM-CAUgenetranslation-rna−372483732274
rps14generibosomal-protein−3747137774303
psaBgenephotosystem-i−37902401072205
psaAgenephotosystem-i−40132423852253
ycf3geneother−43065449941929
trnS-GGAgenetranslation-rna+458674595487
rps4generibosomal-protein−4623846844606
trnT-UGUgenetranslation-rna−471854725873
trnL-UAAgenetranslation-rna+4792548493568
trnF-GAAgenetranslation-rna+487974887073
ndhJgenenad-dehydrogenase−4951949996477
ndhKgenenad-dehydrogenase−5010050778678
ndhCgenenad-dehydrogenase−5083051193363
trnV-UACgenetranslation-rna−5218152840659
trnM-CAUgenetranslation-rna+530205309373
atpEgeneatp-synthase−5330153703402
atpBgeneatp-synthase−53699551961497
rbcLgeneother+55964574071443
accDgeneother+58132596231491
psaIgenephotosystem-i+5986059971111
ycf4geneother+6040460959555
cemAgeneother+6151262172660
petAgenecytochrome+6237863341963
psbJgenephotosystem-ii−6435764480123
psbLgenephotosystem-ii−6461364730117
psbFgenephotosystem-ii−6475364873120
psbEgenephotosystem-ii−6488765139252
petLgenecytochrome+660616615796
petGgenecytochrome+6633266446114
trnW-CCAgenetranslation-rna−665546662874
trnP-UGGgenetranslation-rna−667976687174
psaJgenephotosystem-i+6714367278135
rpl33generibosomal-protein+6775167952201
rps18generibosomal-protein+6812668432306
rpl20generibosomal-protein−6867269059387
rps12generibosomal-protein−698429795528113
rps12generibosomal-protein+6984213866868826
clpPgeneother−70109720461937
psbBgenephotosystem-ii+72499740261527
psbTgenephotosystem-ii+7420574313108
psbNgenephotosystem-ii−7437374505132
psbHgenephotosystem-ii+7460874830222
petBgenecytochrome+74954763231369
petDgenecytochrome+76511777231212
rpoAgenerna-polymerase−77885788991014
rps11generibosomal-protein−7897079387417
rpl36generibosomal-protein−7948879602114
infAgeneother−7969779931234
rps8generibosomal-protein−8005380464411
rpl14generibosomal-protein−8062780996369
rpl16generibosomal-protein−81122823531231
rps3generibosomal-protein−8250783170663
rpl22generibosomal-protein−8317183627456
rps19generibosomal-protein−8368683965279
rpl2generibosomal-protein−84021855041483
rpl23generibosomal-protein−8552285804282
trnI-CAUgenetranslation-rna−859638603774
ycf2geneother+86125929356810
ycf15geneother+9307693274198
trnL-CAAgenetranslation-rna−935349361581
ndhBgenenad-dehydrogenase−94157963692212
rps7generibosomal-protein−9664397111468
trnV-GACgenetranslation-rna+995279959972
rrn16generibosomal-rna+998211013121491
trnI-GAUgenetranslation-rna+1016101026281018
trnA-UGCgenetranslation-rna+102693103584891
rrn23generibosomal-rna+1037531065652812
rrn4.5generibosomal-rna+106663106766103
rrn5generibosomal-rna+107013107134121
trnR-ACCgenetranslation-rna+10736810744274
trnN-GUUgenetranslation-rna+10799710806972
ndhFgenenad-dehydrogenase−1091451113862241
rpl32generibosomal-protein+111833112010177
trnL-UAGgenetranslation-rna+11244411252480
ccsAgeneother+112607113582975
ndhDgenenad-dehydrogenase−1138191153491530
psaCgenephotosystem-i−115455115701246
ndhEgenenad-dehydrogenase−115956116262306
ndhGgenenad-dehydrogenase−116485117016531
ndhIgenenad-dehydrogenase−117364117865501
ndhAgenenad-dehydrogenase−1179451200552110
ndhHgenenad-dehydrogenase−1200561212381182
rps15generibosomal-protein−121334121607273
ycf1geneother−1218751273895514
trnN-GUUgenetranslation-rna+12776312783572
trnR-ACCgenetranslation-rna−12839012846474
rrn5generibosomal-rna−128698128819121
rrn4.5generibosomal-rna−129066129169103
rrn23generibosomal-rna−1292671320792812
trnA-UGCgenetranslation-rna−132248133139891
trnI-GAUgenetranslation-rna−1332041342221018
rrn16generibosomal-rna−1345201360111491
trnV-GACgenetranslation-rna−13623313630572
rps7generibosomal-protein+138721139189468
ndhBgenenad-dehydrogenase+1394631416752212
trnL-CAAgenetranslation-rna+14221714229881
ycf15geneother−142558142756198
ycf2geneother−1428971497076810
trnI-CAUgenetranslation-rna+14979514986974
rpl23generibosomal-protein+150028150310282
rpl2generibosomal-protein+1503281518111483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources