Coordinate-aware organelle record

Scutellaria angustifolia chloroplast genome

Available MW420978.1 152,539 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1955	3302	1347
rps16	gene	ribosomal-protein	−	5157	6326	1169
trnQ-UUC	gene	translation-rna	−	7436	7508	72
psbK	gene	photosystem-ii	+	7832	8018	186
psbI	gene	photosystem-ii	+	8408	8519	111
trnS-GCU	gene	translation-rna	−	8635	8723	88
trnG-UCC	gene	translation-rna	+	9399	10161	762
trnR-UCU	gene	translation-rna	+	10335	10407	72
atpA	gene	atp-synthase	−	10503	12027	1524
atpF	gene	atp-synthase	−	12100	13327	1227
atpH	gene	atp-synthase	−	13693	13939	246
atpI	gene	atp-synthase	−	14935	15679	744
rps2	gene	ribosomal-protein	−	16028	16739	711
rpoC2	gene	rna-polymerase	−	16955	21161	4206
rpoC1	gene	rna-polymerase	−	21315	24145	2830
rpoB	gene	rna-polymerase	−	24171	27384	3213
trnC-GCA	gene	translation-rna	+	28538	28609	71
petN	gene	cytochrome	+	29322	29412	90
psbM	gene	photosystem-ii	−	30414	30519	105
trnD-GUC	gene	translation-rna	−	31044	31118	74
trnY-GUA	gene	translation-rna	−	31231	31315	84
trnE-UUC	gene	translation-rna	−	31374	31447	73
trnT-GGU	gene	translation-rna	+	32029	32101	72
psbD	gene	photosystem-ii	+	33411	34473	1062
psbC	gene	photosystem-ii	+	34420	35842	1422
trnS-UCA	gene	translation-rna	−	36084	36177	93
psbZ	gene	photosystem-ii	+	36497	36686	189
trnG-GCC	gene	translation-rna	+	36957	37028	71
trnfM-CAU	gene	translation-rna	−	37181	37255	74
rps14	gene	ribosomal-protein	−	37404	37707	303
psaB	gene	photosystem-i	−	37832	40037	2205
psaA	gene	photosystem-i	−	40062	42315	2253
ycf3	gene	other	−	42988	44911	1923
trnS-GGA	gene	translation-rna	+	45796	45883	87
rps4	gene	ribosomal-protein	−	46168	46774	606
trnT-UGU	gene	translation-rna	−	47115	47188	73
trnL-UAA	gene	translation-rna	+	47863	48433	570
trnF-GAA	gene	translation-rna	+	48737	48810	73
ndhJ	gene	nad-dehydrogenase	−	49458	49935	477
ndhK	gene	nad-dehydrogenase	−	50043	50721	678
ndhC	gene	nad-dehydrogenase	−	50773	51136	363
trnV-UAC	gene	translation-rna	−	52156	52809	653
trnM-CAU	gene	translation-rna	+	52989	53062	73
atpE	gene	atp-synthase	−	53271	53673	402
atpB	gene	atp-synthase	−	53669	55157	1488
rbcL	gene	other	+	55930	57373	1443
accD	gene	other	+	58102	59569	1467
psaI	gene	photosystem-i	+	60285	60396	111
ycf4	gene	other	+	60821	61376	555
cemA	gene	other	+	62061	62721	660
petA	gene	cytochrome	+	62927	63890	963
psbJ	gene	photosystem-ii	−	64911	65034	123
psbL	gene	photosystem-ii	−	65167	65284	117
psbF	gene	photosystem-ii	−	65307	65427	120
psbE	gene	photosystem-ii	−	65441	65693	252
petL	gene	cytochrome	+	66600	66696	96
petG	gene	cytochrome	+	66871	66985	114
trnW-CCA	gene	translation-rna	−	67103	67177	74
trnP-UGG	gene	translation-rna	−	67346	67420	74
psaJ	gene	photosystem-i	+	67692	67827	135
rpl33	gene	ribosomal-protein	+	68298	68499	201
rps18	gene	ribosomal-protein	+	68673	68979	306
rpl20	gene	ribosomal-protein	−	69216	69603	387
rps12	gene	ribosomal-protein	−	70386	98548	28162
rps12	gene	ribosomal-protein	+	70386	139306	68920
clpP	gene	other	−	70654	72591	1937
psbB	gene	photosystem-ii	+	73064	74591	1527
psbT	gene	photosystem-ii	+	74794	74896	102
psbN	gene	photosystem-ii	−	74969	75101	132
psbH	gene	photosystem-ii	+	75204	75426	222
petB	gene	cytochrome	+	75550	76918	1368
petD	gene	cytochrome	+	77106	78308	1202
rpoA	gene	rna-polymerase	−	78470	79484	1014
rps11	gene	ribosomal-protein	−	79555	79972	417
rpl36	gene	ribosomal-protein	−	80073	80187	114
infA	gene	other	−	80282	80516	234
rps8	gene	ribosomal-protein	−	80635	81046	411
rpl14	gene	ribosomal-protein	−	81214	81583	369
rpl16	gene	ribosomal-protein	−	81709	82953	1244
rps3	gene	ribosomal-protein	−	83107	83770	663
rpl22	gene	ribosomal-protein	−	83771	84227	456
rps19	gene	ribosomal-protein	−	84286	84436	150
rpl2	gene	ribosomal-protein	−	84619	86102	1483
rpl23	gene	ribosomal-protein	−	86120	86402	282
trnI-CAU	gene	translation-rna	−	86561	86635	74
ycf2	gene	other	+	86723	93533	6810
ycf15	gene	other	+	93674	93872	198
trnL-CAA	gene	translation-rna	−	94127	94208	81
ndhB	gene	nad-dehydrogenase	−	94750	96962	2212
rps7	gene	ribosomal-protein	−	97236	97704	468
trnV-GAC	gene	translation-rna	+	100125	100197	72
rrn16	gene	ribosomal-rna	+	100424	101915	1491
trnI-GAU	gene	translation-rna	+	102213	103233	1020
trnA-UGC	gene	translation-rna	+	103298	104183	885
rrn23	gene	ribosomal-rna	+	104352	107165	2813
rrn4.5	gene	ribosomal-rna	+	107263	107366	103
rrn5	gene	ribosomal-rna	+	107613	107734	121
trnR-ACC	gene	translation-rna	+	107968	108042	74
trnN-GUU	gene	translation-rna	+	108589	108661	72
ndhF	gene	nad-dehydrogenase	−	109737	111978	2241
rpl32	gene	ribosomal-protein	+	112501	112678	177
trnL-UAG	gene	translation-rna	+	113103	113183	80
ccsA	gene	other	+	113279	114254	975
ndhD	gene	nad-dehydrogenase	−	114486	115797	1311
psaC	gene	photosystem-i	−	116108	116354	246
ndhE	gene	nad-dehydrogenase	−	116610	116916	306
ndhG	gene	nad-dehydrogenase	−	117136	117667	531
ndhI	gene	nad-dehydrogenase	−	118020	118533	513
ndhA	gene	nad-dehydrogenase	−	118613	120706	2093
ndhH	gene	nad-dehydrogenase	−	120707	121889	1182
rps15	gene	ribosomal-protein	−	121991	122264	273
ycf1	gene	other	−	122529	128073	5544
trnN-GUU	gene	translation-rna	+	128402	128474	72
trnR-ACC	gene	translation-rna	−	129021	129095	74
rrn5	gene	ribosomal-rna	−	129329	129450	121
rrn4.5	gene	ribosomal-rna	−	129697	129800	103
rrn23	gene	ribosomal-rna	−	129898	132711	2813
trnA-UGC	gene	translation-rna	−	132880	133765	885
trnI-GAU	gene	translation-rna	−	133830	134850	1020
rrn16	gene	ribosomal-rna	−	135148	136639	1491
trnV-GAC	gene	translation-rna	−	136866	136938	72
rps7	gene	ribosomal-protein	+	139359	139827	468
ndhB	gene	nad-dehydrogenase	+	140101	142313	2212
trnL-CAA	gene	translation-rna	+	142855	142936	81
ycf15	gene	other	−	143191	143389	198
ycf2	gene	other	−	143530	150340	6810
trnI-CAU	gene	translation-rna	+	150428	150502	74
rpl23	gene	ribosomal-protein	+	150661	150943	282
rpl2	gene	ribosomal-protein	+	150961	152444	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420978.1DNA · accDMW420978DNA · atpBMW420978DNA · matKMW420978DNA · ndhFMW420978DNA · psbAMW420978DNA · rbcLMW420978DNA · rps12MW420978DNA · ycf1MW420978