Scutellaria barbata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_059814.1 · 3–76 bp · −
psbA · NC_059814.1 · 369–1,427 bp · −
trnK-UUU · NC_059814.1 · 1,661–4,249 bp · −
matK · NC_059814.1 · 1,956–3,491 bp · −
rps16 · NC_059814.1 · 5,122–6,289 bp · −
trnQ-UUG · NC_059814.1 · 7,309–7,380 bp · −
trnS-GCU · NC_059814.1 · 8,510–8,597 bp · −
atpA · NC_059814.1 · 10,379–11,902 bp · −
atpF · NC_059814.1 · 11,985–13,212 bp · −
atpH · NC_059814.1 · 13,575–13,820 bp · −
atpI · NC_059814.1 · 14,816–15,559 bp · −
rps2 · NC_059814.1 · 15,908–16,618 bp · −
rpoC2 · NC_059814.1 · 16,835–21,040 bp · −
rpoC1 · NC_059814.1 · 21,195–24,030 bp · −
rpoB · NC_059814.1 · 24,057–27,269 bp · −
psbM · NC_059814.1 · 30,310–30,414 bp · −
trnD-GUC · NC_059814.1 · 30,941–31,014 bp · −
trnY-GUA · NC_059814.1 · 31,128–31,211 bp · −
trnS-UGA · NC_059814.1 · 35,958–36,049 bp · −
trnfM-CAU · NC_059814.1 · 37,053–37,126 bp · −
rps14 · NC_059814.1 · 37,276–37,578 bp · −
psaB · NC_059814.1 · 37,706–39,910 bp · −
psaA · NC_059814.1 · 39,936–42,188 bp · −
ycf3 · NC_059814.1 · 42,858–44,779 bp · −
rps4 · NC_059814.1 · 46,037–46,642 bp · −
trnT-UGU · NC_059814.1 · 46,983–47,055 bp · −
ndhJ · NC_059814.1 · 49,319–49,795 bp · −
ndhK · NC_059814.1 · 49,903–50,580 bp · −
ndhC · NC_059814.1 · 50,633–50,995 bp · −
trnV-UAC · NC_059814.1 · 51,851–52,503 bp · −
atpE · NC_059814.1 · 52,972–53,373 bp · −
atpB · NC_059814.1 · 53,370–54,857 bp · −
psbJ · NC_059814.1 · 64,469–64,591 bp · −
psbL · NC_059814.1 · 64,725–64,841 bp · −
psbF · NC_059814.1 · 64,865–64,984 bp · −
psbE · NC_059814.1 · 64,999–65,250 bp · −
trnW-CCA · NC_059814.1 · 66,662–66,735 bp · −
trnP-UGG · NC_059814.1 · 66,905–66,978 bp · −
rpl20 · NC_059814.1 · 68,777–69,163 bp · −
rps12 · NC_059814.1 · 69,952–70,077 bp · −
rps12 · NC_059814.1 · 97,287–98,077 bp · −
clpP · NC_059814.1 · 70,220–72,153 bp · −
psbN · NC_059814.1 · 74,513–74,644 bp · −
rpoA · NC_059814.1 · 78,014–79,027 bp · −
rps11 · NC_059814.1 · 79,099–79,515 bp · −
rpl36 · NC_059814.1 · 79,617–79,730 bp · −
infA · NC_059814.1 · 79,826–80,059 bp · −
rps8 · NC_059814.1 · 80,179–80,589 bp · −
rpl14 · NC_059814.1 · 80,760–81,128 bp · −
rpl16 · NC_059814.1 · 81,255–82,481 bp · −
rps3 · NC_059814.1 · 82,637–83,299 bp · −
rpl22 · NC_059814.1 · 83,301–83,756 bp · −
rps19 · NC_059814.1 · 83,816–84,094 bp · −
rpl2 · NC_059814.1 · 84,149–85,631 bp · −
rpl23 · NC_059814.1 · 85,650–85,931 bp · −
trnI-CAU · NC_059814.1 · 86,091–86,164 bp · −
trnL-CAA · NC_059814.1 · 93,657–93,737 bp · −
ndhB · NC_059814.1 · 94,280–96,491 bp · −
rps7 · NC_059814.1 · 96,766–97,233 bp · −
trnN-GUU · NC_059814.1 · 108,114–108,185 bp · −
ndhF · NC_059814.1 · 109,262–111,502 bp · −
psaC · NC_059814.1 · 115,642–115,887 bp · −
ndhE · NC_059814.1 · 116,144–116,449 bp · −
ndhG · NC_059814.1 · 116,671–117,201 bp · −
ndhI · NC_059814.1 · 117,567–118,067 bp · −
ndhA · NC_059814.1 · 118,148–120,239 bp · −
ndhH · NC_059814.1 · 120,241–121,422 bp · −
rps15 · NC_059814.1 · 121,525–121,797 bp · −
ycf1 · NC_059814.1 · 122,055–127,589 bp · −
trnR-ACG · NC_059814.1 · 128,530–128,603 bp · −
rrn5S · NC_059814.1 · 128,838–128,958 bp · −
rrn4.5S · NC_059814.1 · 129,206–129,308 bp · −
rrn23S · NC_059814.1 · 129,407–132,219 bp · −
trnA-UGC · NC_059814.1 · 132,389–133,270 bp · −
trnI-GAU · NC_059814.1 · 133,335–134,361 bp · −
rrn16S · NC_059814.1 · 134,660–136,150 bp · −
trnV-GAC · NC_059814.1 · 136,378–136,449 bp · −
ycf15 · NC_059814.1 · 142,703–142,900 bp · −
ycf2 · NC_059814.1 · 143,042–149,851 bp · −
psbK · NC_059814.1 · 7,705–7,890 bp · +
psbI · NC_059814.1 · 8,281–8,391 bp · +
trnG-UCC · NC_059814.1 · 9,280–10,040 bp · +
trnR-UCU · NC_059814.1 · 10,211–10,282 bp · +
trnC-GCA · NC_059814.1 · 28,436–28,506 bp · +
petN · NC_059814.1 · 29,216–29,305 bp · +
trnT-GGU · NC_059814.1 · 31,920–31,991 bp · +
psbD · NC_059814.1 · 33,292–34,353 bp · +
psbC · NC_059814.1 · 34,301–35,722 bp · +
psbZ · NC_059814.1 · 36,369–36,557 bp · +
trnG-GCC · NC_059814.1 · 36,829–36,899 bp · +
trnS-GGA · NC_059814.1 · 45,665–45,751 bp · +
trnL-UAA · NC_059814.1 · 47,733–48,293 bp · +
trnF-GAA · NC_059814.1 · 48,599–48,671 bp · +
trnM-CAU · NC_059814.1 · 52,684–52,756 bp · +
rbcL · NC_059814.1 · 55,629–57,068 bp · +
accD · NC_059814.1 · 57,804–59,270 bp · +
psaI · NC_059814.1 · 59,844–59,954 bp · +
ycf4 · NC_059814.1 · 60,380–60,934 bp · +
cemA · NC_059814.1 · 61,672–62,271 bp · +
petA · NC_059814.1 · 62,478–63,440 bp · +
petL · NC_059814.1 · 66,159–66,254 bp · +
petG · NC_059814.1 · 66,430–66,543 bp · +
psaJ · NC_059814.1 · 67,251–67,385 bp · +
rpl33 · NC_059814.1 · 67,859–68,059 bp · +
rps18 · NC_059814.1 · 68,234–68,539 bp · +
rps12 · NC_059814.1 · 138,027–138,255 bp · +
rps12 · NC_059814.1 · 138,792–138,817 bp · +
psbB · NC_059814.1 · 72,620–74,146 bp · +
psbT · NC_059814.1 · 74,338–74,439 bp · +
psbH · NC_059814.1 · 74,748–74,969 bp · +
petB · NC_059814.1 · 75,094–76,461 bp · +
petD · NC_059814.1 · 76,650–77,851 bp · +
ycf2 · NC_059814.1 · 86,253–93,062 bp · +
ycf15 · NC_059814.1 · 93,204–93,401 bp · +
trnV-GAC · NC_059814.1 · 99,655–99,726 bp · +
rrn16S · NC_059814.1 · 99,954–101,444 bp · +
trnI-GAU · NC_059814.1 · 101,743–102,769 bp · +
trnA-UGC · NC_059814.1 · 102,834–103,715 bp · +
rrn23S · NC_059814.1 · 103,885–106,697 bp · +
rrn4.5S · NC_059814.1 · 106,796–106,898 bp · +
rrn5S · NC_059814.1 · 107,146–107,266 bp · +
trnR-ACG · NC_059814.1 · 107,501–107,574 bp · +
ycf1 · NC_059814.1 · 108,515–109,297 bp · +
rpl32 · NC_059814.1 · 112,023–112,199 bp · +
trnL-UAG · NC_059814.1 · 112,637–112,716 bp · +
ccsA · NC_059814.1 · 112,813–113,787 bp · +
trnN-GUU · NC_059814.1 · 127,919–127,990 bp · +
rps7 · NC_059814.1 · 138,871–139,338 bp · +
ndhB · NC_059814.1 · 139,613–141,824 bp · +
trnL-CAA · NC_059814.1 · 142,367–142,447 bp · +
trnI-CAU · NC_059814.1 · 149,940–150,013 bp · +
rpl23 · NC_059814.1 · 150,173–150,454 bp · +
rpl2 · NC_059814.1 · 150,473–151,955 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria barbata
ANNOTATED PLASTOME
NC_059814.1
152,050 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38012 76025 114038 152050 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
133 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 369 1427 1059 Locate
trnK-UUU gene − 1661 4249 2589 Locate
matK gene − 1956 3491 1536 Locate
rps16 gene − 5122 6289 1168 Locate
trnQ-UUG gene − 7309 7380 72 Locate
psbK gene + 7705 7890 186 Locate
psbI gene + 8281 8391 111 Locate
trnS-GCU gene − 8510 8597 88 Locate
trnG-UCC gene + 9280 10040 761 Locate
trnR-UCU gene + 10211 10282 72 Locate
atpA gene − 10379 11902 1524 Locate
atpF gene − 11985 13212 1228 Locate
atpH gene − 13575 13820 246 Locate
atpI gene − 14816 15559 744 Locate
rps2 gene − 15908 16618 711 Locate
rpoC2 gene − 16835 21040 4206 Locate
rpoC1 gene − 21195 24030 2836 Locate
rpoB gene − 24057 27269 3213 Locate
trnC-GCA gene + 28436 28506 71 Locate
petN gene + 29216 29305 90 Locate
psbM gene − 30310 30414 105 Locate
trnD-GUC gene − 30941 31014 74 Locate
trnY-GUA gene − 31128 31211 84 Locate
trnT-GGU gene + 31920 31991 72 Locate
psbD gene + 33292 34353 1062 Locate
psbC gene + 34301 35722 1422 Locate
trnS-UGA gene − 35958 36049 92 Locate
psbZ gene + 36369 36557 189 Locate
trnG-GCC gene + 36829 36899 71 Locate
trnfM-CAU gene − 37053 37126 74 Locate
rps14 gene − 37276 37578 303 Locate
psaB gene − 37706 39910 2205 Locate
psaA gene − 39936 42188 2253 Locate
ycf3 gene − 42858 44779 1922 Locate
trnS-GGA gene + 45665 45751 87 Locate
rps4 gene − 46037 46642 606 Locate
trnT-UGU gene − 46983 47055 73 Locate
trnL-UAA gene + 47733 48293 561 Locate
trnF-GAA gene + 48599 48671 73 Locate
ndhJ gene − 49319 49795 477 Locate
ndhK gene − 49903 50580 678 Locate
ndhC gene − 50633 50995 363 Locate
trnV-UAC gene − 51851 52503 653 Locate
trnM-CAU gene + 52684 52756 73 Locate
atpE gene − 52972 53373 402 Locate
atpB gene − 53370 54857 1488 Locate
rbcL gene + 55629 57068 1440 Locate
accD gene + 57804 59270 1467 Locate
psaI gene + 59844 59954 111 Locate
ycf4 gene + 60380 60934 555 Locate
cemA gene + 61672 62271 600 Locate
petA gene + 62478 63440 963 Locate
psbJ gene − 64469 64591 123 Locate
psbL gene − 64725 64841 117 Locate
psbF gene − 64865 64984 120 Locate
psbE gene − 64999 65250 252 Locate
petL gene + 66159 66254 96 Locate
petG gene + 66430 66543 114 Locate
trnW-CCA gene − 66662 66735 74 Locate
trnP-UGG gene − 66905 66978 74 Locate
psaJ gene + 67251 67385 135 Locate
rpl33 gene + 67859 68059 201 Locate
rps18 gene + 68234 68539 306 Locate
rpl20 gene − 68777 69163 387 Locate
rps12 gene − 69952 70077 126 Locate
clpP gene − 70220 72153 1934 Locate
psbB gene + 72620 74146 1527 Locate
psbT gene + 74338 74439 102 Locate
psbN gene − 74513 74644 132 Locate
psbH gene + 74748 74969 222 Locate
petB gene + 75094 76461 1368 Locate
petD gene + 76650 77851 1202 Locate
rpoA gene − 78014 79027 1014 Locate
rps11 gene − 79099 79515 417 Locate
rpl36 gene − 79617 79730 114 Locate
infA gene − 79826 80059 234 Locate
rps8 gene − 80179 80589 411 Locate
rpl14 gene − 80760 81128 369 Locate
rpl16 gene − 81255 82481 1227 Locate
rps3 gene − 82637 83299 663 Locate
rpl22 gene − 83301 83756 456 Locate
rps19 gene − 83816 84094 279 Locate
rpl2 gene − 84149 85631 1483 Locate
rpl23 gene − 85650 85931 282 Locate
trnI-CAU gene − 86091 86164 74 Locate
ycf2 gene + 86253 93062 6810 Locate
ycf15 gene + 93204 93401 198 Locate
trnL-CAA gene − 93657 93737 81 Locate
ndhB gene − 94280 96491 2212 Locate
rps7 gene − 96766 97233 468 Locate
rps12 gene − 97287 98077 791 Locate
trnV-GAC gene + 99655 99726 72 Locate
rrn16S gene + 99954 101444 1491 Locate
trnI-GAU gene + 101743 102769 1027 Locate
trnA-UGC gene + 102834 103715 882 Locate
rrn23S gene + 103885 106697 2813 Locate
rrn4.5S gene + 106796 106898 103 Locate
rrn5S gene + 107146 107266 121 Locate
trnR-ACG gene + 107501 107574 74 Locate
trnN-GUU gene − 108114 108185 72 Locate
ycf1 gene + 108515 109297 783 Locate
ndhF gene − 109262 111502 2241 Locate
rpl32 gene + 112023 112199 177 Locate
trnL-UAG gene + 112637 112716 80 Locate
ccsA gene + 112813 113787 975 Locate
psaC gene − 115642 115887 246 Locate
ndhE gene − 116144 116449 306 Locate
ndhG gene − 116671 117201 531 Locate
ndhI gene − 117567 118067 501 Locate
ndhA gene − 118148 120239 2092 Locate
ndhH gene − 120241 121422 1182 Locate
rps15 gene − 121525 121797 273 Locate
ycf1 gene − 122055 127589 5535 Locate
trnN-GUU gene + 127919 127990 72 Locate
trnR-ACG gene − 128530 128603 74 Locate
rrn5S gene − 128838 128958 121 Locate
rrn4.5S gene − 129206 129308 103 Locate
rrn23S gene − 129407 132219 2813 Locate
trnA-UGC gene − 132389 133270 882 Locate
trnI-GAU gene − 133335 134361 1027 Locate
rrn16S gene − 134660 136150 1491 Locate
trnV-GAC gene − 136378 136449 72 Locate
rps12 gene + 138027 138255 229 Locate
rps12 gene + 138792 138817 26 Locate
rps7 gene + 138871 139338 468 Locate
ndhB gene + 139613 141824 2212 Locate
trnL-CAA gene + 142367 142447 81 Locate
ycf15 gene − 142703 142900 198 Locate
ycf2 gene − 143042 149851 6810 Locate
trnI-CAU gene + 149940 150013 74 Locate
rpl23 gene + 150173 150454 282 Locate
rpl2 gene + 150473 151955 1483 Locate
Status Available
Accession NC_059814.1
Length 152,050 bp
GC content 38.4%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 11 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources