Scutellaria forrestii chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_072113.1 · 3–76 bp · −
psbA · NC_072113.1 · 369–1,427 bp · −
trnK-UUU · NC_072113.1 · 1,669–4,257 bp · −
matK · NC_072113.1 · 1,964–3,310 bp · −
rps16 · NC_072113.1 · 5,020–6,183 bp · −
trnQ-UUG · NC_072113.1 · 6,989–7,060 bp · −
trnS-GCU · NC_072113.1 · 8,188–8,275 bp · −
atpA · NC_072113.1 · 10,056–11,579 bp · −
atpF · NC_072113.1 · 11,662–12,889 bp · −
atpH · NC_072113.1 · 13,247–13,492 bp · −
atpI · NC_072113.1 · 14,488–15,231 bp · −
rps2 · NC_072113.1 · 15,581–16,291 bp · −
rpoC2 · NC_072113.1 · 16,508–20,713 bp · −
rpoC1 · NC_072113.1 · 20,868–23,698 bp · −
rpoB · NC_072113.1 · 23,725–26,937 bp · −
psbM · NC_072113.1 · 30,022–30,126 bp · −
trnD-GUC · NC_072113.1 · 30,653–30,726 bp · −
trnY-GUA · NC_072113.1 · 30,840–30,923 bp · −
trnS-UGA · NC_072113.1 · 35,674–35,765 bp · −
trnfM-CAU · NC_072113.1 · 36,759–36,832 bp · −
rps14 · NC_072113.1 · 36,982–37,284 bp · −
psaB · NC_072113.1 · 37,412–39,616 bp · −
psaA · NC_072113.1 · 39,642–41,894 bp · −
ycf3 · NC_072113.1 · 42,564–44,486 bp · −
rps4 · NC_072113.1 · 45,744–46,349 bp · −
trnT-UGU · NC_072113.1 · 46,691–46,763 bp · −
ndhJ · NC_072113.1 · 49,037–49,513 bp · −
ndhK · NC_072113.1 · 49,621–50,298 bp · −
ndhC · NC_072113.1 · 50,352–50,714 bp · −
trnV-UAC · NC_072113.1 · 51,558–52,215 bp · −
atpE · NC_072113.1 · 52,684–53,085 bp · −
atpB · NC_072113.1 · 53,082–54,569 bp · −
psbJ · NC_072113.1 · 64,181–64,303 bp · −
psbL · NC_072113.1 · 64,437–64,553 bp · −
psbF · NC_072113.1 · 64,577–64,696 bp · −
psbE · NC_072113.1 · 64,711–64,962 bp · −
trnW-CCA · NC_072113.1 · 66,373–66,446 bp · −
trnP-UGG · NC_072113.1 · 66,616–66,689 bp · −
rpl20 · NC_072113.1 · 68,486–68,872 bp · −
rps12 · NC_072113.1 · 69,661–69,786 bp · −
rps12 · NC_072113.1 · 96,975–97,765 bp · −
clpP · NC_072113.1 · 69,929–71,862 bp · −
psbN · NC_072113.1 · 74,200–74,331 bp · −
rpoA · NC_072113.1 · 77,701–78,714 bp · −
rps11 · NC_072113.1 · 78,786–79,202 bp · −
rpl36 · NC_072113.1 · 79,304–79,417 bp · −
infA · NC_072113.1 · 79,513–79,746 bp · −
rps8 · NC_072113.1 · 79,866–80,276 bp · −
rpl14 · NC_072113.1 · 80,449–80,817 bp · −
rpl16 · NC_072113.1 · 80,944–82,170 bp · −
rps3 · NC_072113.1 · 82,325–82,987 bp · −
rpl22 · NC_072113.1 · 82,989–83,444 bp · −
rps19 · NC_072113.1 · 83,504–83,782 bp · −
rpl2 · NC_072113.1 · 83,837–85,319 bp · −
rpl23 · NC_072113.1 · 85,338–85,619 bp · −
trnI-CAU · NC_072113.1 · 85,779–85,852 bp · −
trnL-CAA · NC_072113.1 · 93,345–93,425 bp · −
ndhB · NC_072113.1 · 93,968–96,179 bp · −
rps7 · NC_072113.1 · 96,454–96,921 bp · −
trnN-GUU · NC_072113.1 · 107,804–107,875 bp · −
ndhF · NC_072113.1 · 108,952–111,192 bp · −
psaC · NC_072113.1 · 115,342–115,587 bp · −
ndhE · NC_072113.1 · 115,844–116,149 bp · −
ndhG · NC_072113.1 · 116,370–116,900 bp · −
ndhI · NC_072113.1 · 117,265–117,765 bp · −
ndhA · NC_072113.1 · 117,846–119,937 bp · −
ndhH · NC_072113.1 · 119,939–121,120 bp · −
rps15 · NC_072113.1 · 121,223–121,495 bp · −
ycf1 · NC_072113.1 · 121,762–127,296 bp · −
trnR-ACG · NC_072113.1 · 128,244–128,317 bp · −
rrn5S · NC_072113.1 · 128,552–128,672 bp · −
rrn4.5S · NC_072113.1 · 128,920–129,022 bp · −
rrn23S · NC_072113.1 · 129,121–131,933 bp · −
trnA-UGC · NC_072113.1 · 132,103–132,985 bp · −
trnI-GAU · NC_072113.1 · 133,050–134,070 bp · −
rrn16S · NC_072113.1 · 134,369–135,859 bp · −
trnV-GAC · NC_072113.1 · 136,087–136,158 bp · −
ycf15 · NC_072113.1 · 142,412–142,609 bp · −
ycf2 · NC_072113.1 · 142,751–149,560 bp · −
psbK · NC_072113.1 · 7,385–7,570 bp · +
psbI · NC_072113.1 · 7,961–8,071 bp · +
trnG-UCC · NC_072113.1 · 8,957–9,717 bp · +
trnR-UCU · NC_072113.1 · 9,888–9,959 bp · +
trnC-GCA · NC_072113.1 · 28,106–28,176 bp · +
petN · NC_072113.1 · 28,888–28,977 bp · +
trnT-GGU · NC_072113.1 · 31,631–31,702 bp · +
psbD · NC_072113.1 · 33,008–34,069 bp · +
psbC · NC_072113.1 · 34,017–35,438 bp · +
psbZ · NC_072113.1 · 36,085–36,273 bp · +
trnG-GCC · NC_072113.1 · 36,545–36,615 bp · +
trnS-GGA · NC_072113.1 · 45,372–45,458 bp · +
trnL-UAA · NC_072113.1 · 47,448–48,009 bp · +
trnF-GAA · NC_072113.1 · 48,316–48,388 bp · +
trnM-CAU · NC_072113.1 · 52,396–52,468 bp · +
rbcL · NC_072113.1 · 55,342–56,784 bp · +
accD · NC_072113.1 · 57,518–58,984 bp · +
psaI · NC_072113.1 · 59,543–59,653 bp · +
ycf4 · NC_072113.1 · 60,087–60,641 bp · +
cemA · NC_072113.1 · 61,379–61,978 bp · +
petA · NC_072113.1 · 62,185–63,147 bp · +
petL · NC_072113.1 · 65,870–65,965 bp · +
petG · NC_072113.1 · 66,141–66,254 bp · +
psaJ · NC_072113.1 · 66,962–67,096 bp · +
rpl33 · NC_072113.1 · 67,570–67,770 bp · +
rps18 · NC_072113.1 · 67,945–68,250 bp · +
rps12 · NC_072113.1 · 137,736–138,526 bp · +
psbB · NC_072113.1 · 72,307–73,833 bp · +
psbT · NC_072113.1 · 74,025–74,126 bp · +
psbH · NC_072113.1 · 74,435–74,656 bp · +
petB · NC_072113.1 · 74,781–76,148 bp · +
petD · NC_072113.1 · 76,337–77,538 bp · +
ycf2 · NC_072113.1 · 85,941–92,750 bp · +
ycf15 · NC_072113.1 · 92,892–93,089 bp · +
trnV-GAC · NC_072113.1 · 99,343–99,414 bp · +
rrn16S · NC_072113.1 · 99,642–101,132 bp · +
trnI-GAU · NC_072113.1 · 101,431–102,451 bp · +
trnA-UGC · NC_072113.1 · 102,516–103,398 bp · +
rrn23S · NC_072113.1 · 103,568–106,380 bp · +
rrn4.5S · NC_072113.1 · 106,479–106,581 bp · +
rrn5S · NC_072113.1 · 106,829–106,949 bp · +
trnR-ACG · NC_072113.1 · 107,184–107,257 bp · +
rpl32 · NC_072113.1 · 111,713–111,889 bp · +
trnL-UAG · NC_072113.1 · 112,335–112,414 bp · +
ccsA · NC_072113.1 · 112,513–113,487 bp · +
trnN-GUU · NC_072113.1 · 127,626–127,697 bp · +
rps7 · NC_072113.1 · 138,580–139,047 bp · +
ndhB · NC_072113.1 · 139,322–141,533 bp · +
trnL-CAA · NC_072113.1 · 142,076–142,156 bp · +
trnI-CAU · NC_072113.1 · 149,649–149,722 bp · +
rpl23 · NC_072113.1 · 149,882–150,163 bp · +
rpl2 · NC_072113.1 · 150,182–151,664 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria forrestii
ANNOTATED PLASTOME
NC_072113.1
151,759 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37940 75880 113819 151759 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 369 1427 1059 Locate
trnK-UUU gene − 1669 4257 2589 Locate
matK gene − 1964 3310 1347 Locate
rps16 gene − 5020 6183 1164 Locate
trnQ-UUG gene − 6989 7060 72 Locate
psbK gene + 7385 7570 186 Locate
psbI gene + 7961 8071 111 Locate
trnS-GCU gene − 8188 8275 88 Locate
trnG-UCC gene + 8957 9717 761 Locate
trnR-UCU gene + 9888 9959 72 Locate
atpA gene − 10056 11579 1524 Locate
atpF gene − 11662 12889 1228 Locate
atpH gene − 13247 13492 246 Locate
atpI gene − 14488 15231 744 Locate
rps2 gene − 15581 16291 711 Locate
rpoC2 gene − 16508 20713 4206 Locate
rpoC1 gene − 20868 23698 2831 Locate
rpoB gene − 23725 26937 3213 Locate
trnC-GCA gene + 28106 28176 71 Locate
petN gene + 28888 28977 90 Locate
psbM gene − 30022 30126 105 Locate
trnD-GUC gene − 30653 30726 74 Locate
trnY-GUA gene − 30840 30923 84 Locate
trnT-GGU gene + 31631 31702 72 Locate
psbD gene + 33008 34069 1062 Locate
psbC gene + 34017 35438 1422 Locate
trnS-UGA gene − 35674 35765 92 Locate
psbZ gene + 36085 36273 189 Locate
trnG-GCC gene + 36545 36615 71 Locate
trnfM-CAU gene − 36759 36832 74 Locate
rps14 gene − 36982 37284 303 Locate
psaB gene − 37412 39616 2205 Locate
psaA gene − 39642 41894 2253 Locate
ycf3 gene − 42564 44486 1923 Locate
trnS-GGA gene + 45372 45458 87 Locate
rps4 gene − 45744 46349 606 Locate
trnT-UGU gene − 46691 46763 73 Locate
trnL-UAA gene + 47448 48009 562 Locate
trnF-GAA gene + 48316 48388 73 Locate
ndhJ gene − 49037 49513 477 Locate
ndhK gene − 49621 50298 678 Locate
ndhC gene − 50352 50714 363 Locate
trnV-UAC gene − 51558 52215 658 Locate
trnM-CAU gene + 52396 52468 73 Locate
atpE gene − 52684 53085 402 Locate
atpB gene − 53082 54569 1488 Locate
rbcL gene + 55342 56784 1443 Locate
accD gene + 57518 58984 1467 Locate
psaI gene + 59543 59653 111 Locate
ycf4 gene + 60087 60641 555 Locate
cemA gene + 61379 61978 600 Locate
petA gene + 62185 63147 963 Locate
psbJ gene − 64181 64303 123 Locate
psbL gene − 64437 64553 117 Locate
psbF gene − 64577 64696 120 Locate
psbE gene − 64711 64962 252 Locate
petL gene + 65870 65965 96 Locate
petG gene + 66141 66254 114 Locate
trnW-CCA gene − 66373 66446 74 Locate
trnP-UGG gene − 66616 66689 74 Locate
psaJ gene + 66962 67096 135 Locate
rpl33 gene + 67570 67770 201 Locate
rps18 gene + 67945 68250 306 Locate
rpl20 gene − 68486 68872 387 Locate
rps12 gene − 69661 69786 126 Locate
clpP gene − 69929 71862 1934 Locate
psbB gene + 72307 73833 1527 Locate
psbT gene + 74025 74126 102 Locate
psbN gene − 74200 74331 132 Locate
psbH gene + 74435 74656 222 Locate
petB gene + 74781 76148 1368 Locate
petD gene + 76337 77538 1202 Locate
rpoA gene − 77701 78714 1014 Locate
rps11 gene − 78786 79202 417 Locate
rpl36 gene − 79304 79417 114 Locate
infA gene − 79513 79746 234 Locate
rps8 gene − 79866 80276 411 Locate
rpl14 gene − 80449 80817 369 Locate
rpl16 gene − 80944 82170 1227 Locate
rps3 gene − 82325 82987 663 Locate
rpl22 gene − 82989 83444 456 Locate
rps19 gene − 83504 83782 279 Locate
rpl2 gene − 83837 85319 1483 Locate
rpl23 gene − 85338 85619 282 Locate
trnI-CAU gene − 85779 85852 74 Locate
ycf2 gene + 85941 92750 6810 Locate
ycf15 gene + 92892 93089 198 Locate
trnL-CAA gene − 93345 93425 81 Locate
ndhB gene − 93968 96179 2212 Locate
rps7 gene − 96454 96921 468 Locate
rps12 gene − 96975 97765 791 Locate
trnV-GAC gene + 99343 99414 72 Locate
rrn16S gene + 99642 101132 1491 Locate
trnI-GAU gene + 101431 102451 1021 Locate
trnA-UGC gene + 102516 103398 883 Locate
rrn23S gene + 103568 106380 2813 Locate
rrn4.5S gene + 106479 106581 103 Locate
rrn5S gene + 106829 106949 121 Locate
trnR-ACG gene + 107184 107257 74 Locate
trnN-GUU gene − 107804 107875 72 Locate
ndhF gene − 108952 111192 2241 Locate
rpl32 gene + 111713 111889 177 Locate
trnL-UAG gene + 112335 112414 80 Locate
ccsA gene + 112513 113487 975 Locate
psaC gene − 115342 115587 246 Locate
ndhE gene − 115844 116149 306 Locate
ndhG gene − 116370 116900 531 Locate
ndhI gene − 117265 117765 501 Locate
ndhA gene − 117846 119937 2092 Locate
ndhH gene − 119939 121120 1182 Locate
rps15 gene − 121223 121495 273 Locate
ycf1 gene − 121762 127296 5535 Locate
trnN-GUU gene + 127626 127697 72 Locate
trnR-ACG gene − 128244 128317 74 Locate
rrn5S gene − 128552 128672 121 Locate
rrn4.5S gene − 128920 129022 103 Locate
rrn23S gene − 129121 131933 2813 Locate
trnA-UGC gene − 132103 132985 883 Locate
trnI-GAU gene − 133050 134070 1021 Locate
rrn16S gene − 134369 135859 1491 Locate
trnV-GAC gene − 136087 136158 72 Locate
rps12 gene + 137736 138526 791 Locate
rps7 gene + 138580 139047 468 Locate
ndhB gene + 139322 141533 2212 Locate
trnL-CAA gene + 142076 142156 81 Locate
ycf15 gene − 142412 142609 198 Locate
ycf2 gene − 142751 149560 6810 Locate
trnI-CAU gene + 149649 149722 74 Locate
rpl23 gene + 149882 150163 282 Locate
rpl2 gene + 150182 151664 1483 Locate
Status Available
Accession NC_072113.1
Length 151,759 bp
GC content 38.4%
Annotated genes 130
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 11 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources