Coordinate-aware organelle record

Scutellaria franchetiana chloroplast genome

Available NC_059813.1 151,852 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1664	4253	2589
matK	gene	other	−	1959	3495	1536
rps16	gene	ribosomal-protein	−	5133	6298	1165
trnQ-UUG	gene	translation-rna	−	7302	7374	72
psbK	gene	photosystem-ii	+	7698	7884	186
psbI	gene	photosystem-ii	+	8275	8386	111
trnS-GCU	gene	translation-rna	−	8496	8584	88
trnG-UCC	gene	translation-rna	+	9265	10018	753
trnR-UCU	gene	translation-rna	+	10188	10260	72
atpA	gene	atp-synthase	−	10356	11880	1524
atpF	gene	atp-synthase	−	11962	13190	1228
atpH	gene	atp-synthase	−	13545	13791	246
atpI	gene	atp-synthase	−	14786	15530	744
rps2	gene	ribosomal-protein	−	15878	16589	711
rpoC2	gene	rna-polymerase	−	16805	21011	4206
rpoC1	gene	rna-polymerase	−	21165	23995	2830
rpoB	gene	rna-polymerase	−	24021	27234	3213
trnC-GCA	gene	translation-rna	+	28394	28465	71
petN	gene	cytochrome	+	29176	29266	90
psbM	gene	photosystem-ii	−	30259	30364	105
trnD-GUC	gene	translation-rna	−	30890	30964	74
trnY-GUA	gene	translation-rna	−	31077	31161	84
trnT-GGU	gene	translation-rna	+	31864	31936	72
psbD	gene	photosystem-ii	+	33097	34159	1062
psbC	gene	photosystem-ii	+	34106	35528	1422
trnS-UGA	gene	translation-rna	−	35763	35855	92
psbZ	gene	photosystem-ii	+	36174	36363	189
trnG-GCC	gene	translation-rna	+	36634	36705	71
trnfM-CAU	gene	translation-rna	−	36858	36932	74
rps14	gene	ribosomal-protein	−	37081	37384	303
psaB	gene	photosystem-i	−	37511	39716	2205
psaA	gene	photosystem-i	−	39741	41994	2253
ycf3	gene	other	−	42662	44586	1924
trnS-GGA	gene	translation-rna	+	45470	45557	87
rps4	gene	ribosomal-protein	−	45842	46448	606
trnT-UGU	gene	translation-rna	−	46789	46862	73
trnL-UAA	gene	translation-rna	+	47546	48108	562
trnF-GAA	gene	translation-rna	+	48414	48487	73
ndhJ	gene	nad-dehydrogenase	−	49140	49617	477
ndhK	gene	nad-dehydrogenase	−	49724	50402	678
ndhC	gene	nad-dehydrogenase	−	50454	50817	363
trnV-UAC	gene	translation-rna	−	51664	52317	653
trnM-CAU	gene	translation-rna	+	52497	52570	73
atpE	gene	atp-synthase	−	52785	53187	402
atpB	gene	atp-synthase	−	53183	54671	1488
rbcL	gene	other	+	55441	56884	1443
accD	gene	other	+	57625	59092	1467
psaI	gene	photosystem-i	+	59649	59760	111
ycf4	gene	other	+	60193	60748	555
cemA	gene	other	+	61486	62086	600
petA	gene	cytochrome	+	62292	63255	963
psbJ	gene	photosystem-ii	−	64289	64412	123
psbL	gene	photosystem-ii	−	64545	64662	117
psbF	gene	photosystem-ii	−	64685	64805	120
psbE	gene	photosystem-ii	−	64819	65071	252
petL	gene	cytochrome	+	65979	66075	96
petG	gene	cytochrome	+	66250	66364	114
trnW-CCA	gene	translation-rna	−	66482	66556	74
trnP-UGG	gene	translation-rna	−	66725	66799	74
psaJ	gene	photosystem-i	+	67071	67206	135
rpl33	gene	ribosomal-protein	+	67679	67880	201
rps18	gene	ribosomal-protein	+	68064	68370	306
rpl20	gene	ribosomal-protein	−	68606	68993	387
rps12	gene	ribosomal-protein	−	69781	97894	28113
rps12	gene	ribosomal-protein	+	69781	138643	68862
clpP	gene	other	−	70049	71982	1933
psbB	gene	photosystem-ii	+	72448	73975	1527
psbT	gene	photosystem-ii	+	74166	74268	102
psbN	gene	photosystem-ii	−	74341	74473	132
psbH	gene	photosystem-ii	+	74576	74798	222
petB	gene	cytochrome	+	74922	76290	1368
petD	gene	cytochrome	+	76486	77688	1202
rps11	gene	ribosomal-protein	−	78934	79351	417
rpl36	gene	ribosomal-protein	−	79452	79566	114
infA	gene	other	−	79661	79895	234
rps8	gene	ribosomal-protein	−	80014	80425	411
rpl14	gene	ribosomal-protein	−	80594	80963	369
rpl16	gene	ribosomal-protein	−	81089	82323	1234
rps3	gene	ribosomal-protein	−	82477	83140	663
rpl22	gene	ribosomal-protein	−	83141	83597	456
rps19	gene	ribosomal-protein	−	83656	83935	279
rpl2	gene	ribosomal-protein	−	83989	85472	1483
rpl23	gene	ribosomal-protein	−	85490	85772	282
trnI-CAU	gene	translation-rna	−	85931	86005	74
ycf2	gene	other	+	86093	92903	6810
ycf15	gene	other	+	93020	93218	198
trnL-CAA	gene	translation-rna	−	93473	93554	81
ndhB	gene	nad-dehydrogenase	−	94096	96308	2212
rps7	gene	ribosomal-protein	−	96582	97050	468
trnV-GAC	gene	translation-rna	+	99471	99543	72
rrn16S	gene	ribosomal-rna	+	99770	101261	1491
trnI-GAU	gene	translation-rna	+	101559	102580	1021
trnA-UGC	gene	translation-rna	+	102644	103528	884
rrn23S	gene	ribosomal-rna	+	103697	106510	2813
rrn4.5S	gene	ribosomal-rna	+	106608	106711	103
rrn5S	gene	ribosomal-rna	+	106958	107079	121
trnR-ACG	gene	translation-rna	+	107313	107387	74
trnN-GUU	gene	translation-rna	−	107933	108005	72
ycf1	gene	other	+	108334	109117	783
ndhF	gene	nad-dehydrogenase	−	109081	111322	2241
rpl32	gene	ribosomal-protein	+	111833	112010	177
trnL-UAG	gene	translation-rna	+	112454	112534	80
ccsA	gene	other	+	112617	113592	975
psaC	gene	photosystem-i	−	115446	115692	246
ndhE	gene	nad-dehydrogenase	−	115948	116254	306
ndhG	gene	nad-dehydrogenase	−	116484	117015	531
ndhI	gene	nad-dehydrogenase	−	117379	117880	501
ndhA	gene	nad-dehydrogenase	−	117960	120053	2093
ndhH	gene	nad-dehydrogenase	−	120054	121236	1182
rps15	gene	ribosomal-protein	−	121338	121611	273
ycf1	gene	other	−	121877	127412	5535
trnN-GUU	gene	translation-rna	+	127741	127813	72
trnR-ACG	gene	translation-rna	−	128359	128433	74
rrn5S	gene	ribosomal-rna	−	128667	128788	121
rrn4.5S	gene	ribosomal-rna	−	129035	129138	103
rrn23S	gene	ribosomal-rna	−	129236	132049	2813
trnA-UGC	gene	translation-rna	−	132218	133102	884
trnI-GAU	gene	translation-rna	−	133166	134187	1021
rrn16S	gene	ribosomal-rna	−	134485	135976	1491
trnV-GAC	gene	translation-rna	−	136203	136275	72
rps7	gene	ribosomal-protein	+	138696	139164	468
ndhB	gene	nad-dehydrogenase	+	139438	141650	2212
trnL-CAA	gene	translation-rna	+	142192	142273	81
ycf15	gene	other	−	142528	142726	198
ycf2	gene	other	−	142843	149653	6810
trnI-CAU	gene	translation-rna	+	149741	149815	74
rpl23	gene	ribosomal-protein	+	149974	150256	282
rpl2	gene	ribosomal-protein	+	150274	151757	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_059813.1DNA · accDNC_059813DNA · atpBNC_059813DNA · matKNC_059813DNA · ndhFNC_059813DNA · psbANC_059813DNA · rbcLNC_059813DNA · rps12NC_059813DNA · ycf1NC_059813