Coordinate-aware organelle record

Scutellaria gardoquioides chloroplast genome

Available MW413436.1 151,763 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	269	1328	1059
trnK-UUU	gene	translation-rna	−	1555	4137	2582
matK	gene	other	−	1846	3196	1350
rps16	gene	ribosomal-protein	−	5029	6206	1177
trnQ-UUC	gene	translation-rna	−	7307	7379	72
psbK	gene	photosystem-ii	+	7704	7890	186
psbI	gene	photosystem-ii	+	8283	8394	111
trnS-GCU	gene	translation-rna	−	8503	8591	88
trnG-UCC	gene	translation-rna	+	9301	10053	752
trnR-UCU	gene	translation-rna	+	10227	10299	72
atpA	gene	atp-synthase	−	10396	11920	1524
atpF	gene	atp-synthase	−	12012	13242	1230
atpH	gene	atp-synthase	−	13608	13854	246
atpI	gene	atp-synthase	−	14841	15585	744
rps2	gene	ribosomal-protein	−	15934	16645	711
rpoC2	gene	rna-polymerase	−	16861	21067	4206
rpoC1	gene	rna-polymerase	−	21221	24040	2819
rpoB	gene	rna-polymerase	−	24066	27279	3213
trnC-GCA	gene	translation-rna	+	28432	28503	71
petN	gene	cytochrome	+	29196	29286	90
psbM	gene	photosystem-ii	−	30300	30405	105
trnD-GUC	gene	translation-rna	−	30931	31005	74
trnY-GUA	gene	translation-rna	−	31118	31202	84
trnE-UUC	gene	translation-rna	−	31261	31334	73
trnT-GGU	gene	translation-rna	+	31909	31981	72
psbD	gene	photosystem-ii	+	33291	34353	1062
psbC	gene	photosystem-ii	+	34300	35722	1422
trnS-UCA	gene	translation-rna	−	35964	36057	93
psbZ	gene	photosystem-ii	+	36376	36565	189
trnG-GCC	gene	translation-rna	+	36823	36894	71
trnfM-CAU	gene	translation-rna	−	37041	37115	74
rps14	gene	ribosomal-protein	−	37264	37567	303
psaB	gene	photosystem-i	−	37694	39899	2205
psaA	gene	photosystem-i	−	39924	42177	2253
ycf3	gene	other	−	42877	44795	1918
trnS-GGA	gene	translation-rna	+	45688	45775	87
rps4	gene	ribosomal-protein	−	46058	46664	606
trnT-UGU	gene	translation-rna	−	46997	47070	73
trnL-UAA	gene	translation-rna	+	47752	48324	572
trnF-GAA	gene	translation-rna	+	48628	48701	73
ndhJ	gene	nad-dehydrogenase	−	49351	49828	477
ndhK	gene	nad-dehydrogenase	−	49935	50613	678
ndhC	gene	nad-dehydrogenase	−	50665	51028	363
trnV-UAC	gene	translation-rna	−	51481	52135	654
trnM-CAU	gene	translation-rna	+	52315	52388	73
atpE	gene	atp-synthase	−	52596	52998	402
atpB	gene	atp-synthase	−	52994	54491	1497
rbcL	gene	other	+	55257	56700	1443
accD	gene	other	+	57421	58900	1479
psaI	gene	photosystem-i	+	59609	59720	111
ycf4	gene	other	+	60153	60708	555
cemA	gene	other	+	61390	62050	660
petA	gene	cytochrome	+	62256	63219	963
psbJ	gene	photosystem-ii	−	64249	64372	123
psbL	gene	photosystem-ii	−	64505	64622	117
psbF	gene	photosystem-ii	−	64645	64765	120
psbE	gene	photosystem-ii	−	64779	65031	252
petL	gene	cytochrome	+	65936	66032	96
petG	gene	cytochrome	+	66207	66321	114
trnW-CCA	gene	translation-rna	−	66439	66513	74
trnP-UGG	gene	translation-rna	−	66672	66746	74
psaJ	gene	photosystem-i	+	67018	67153	135
rpl33	gene	ribosomal-protein	+	67636	67837	201
rps18	gene	ribosomal-protein	+	68009	68315	306
rpl20	gene	ribosomal-protein	−	68548	68935	387
rps12	gene	ribosomal-protein	−	69721	97863	28142
rps12	gene	ribosomal-protein	+	69721	138526	68805
clpP	gene	other	−	69981	71922	1941
psbB	gene	photosystem-ii	+	72391	73918	1527
psbT	gene	photosystem-ii	+	74105	74213	108
psbN	gene	photosystem-ii	−	74273	74405	132
psbH	gene	photosystem-ii	+	74508	74730	222
petB	gene	cytochrome	+	74855	76224	1369
petD	gene	cytochrome	+	76412	77614	1202
rpoA	gene	rna-polymerase	−	77970	78795	825
rps11	gene	ribosomal-protein	−	78866	79283	417
rpl36	gene	ribosomal-protein	−	79385	79499	114
infA	gene	other	−	79594	79828	234
rps8	gene	ribosomal-protein	−	79947	80358	411
rpl14	gene	ribosomal-protein	−	80528	80897	369
rpl16	gene	ribosomal-protein	−	81024	82271	1247
rps3	gene	ribosomal-protein	−	82418	83081	663
rpl22	gene	ribosomal-protein	−	83082	83538	456
rps19	gene	ribosomal-protein	−	83597	83747	150
rpl2	gene	ribosomal-protein	−	83930	85413	1483
rpl23	gene	ribosomal-protein	−	85431	85713	282
trnI-CAU	gene	translation-rna	−	85872	85946	74
ycf2	gene	other	+	86034	92844	6810
ycf15	gene	other	+	92985	93183	198
trnL-CAA	gene	translation-rna	−	93443	93524	81
ndhB	gene	nad-dehydrogenase	−	94066	96278	2212
rps7	gene	ribosomal-protein	−	96551	97019	468
trnV-GAC	gene	translation-rna	+	99417	99489	72
rrn16	gene	ribosomal-rna	+	99716	101207	1491
trnI-GAU	gene	translation-rna	+	101497	102516	1019
trnA-UGC	gene	translation-rna	+	102581	103461	880
rrn23	gene	ribosomal-rna	+	103630	106445	2815
rrn4.5	gene	ribosomal-rna	+	106543	106646	103
rrn5	gene	ribosomal-rna	+	106893	107014	121
trnR-ACC	gene	translation-rna	+	107248	107322	74
trnN-GUU	gene	translation-rna	+	107878	107950	72
ndhF	gene	nad-dehydrogenase	−	109032	111273	2241
rpl32	gene	ribosomal-protein	+	111794	111971	177
trnL-UAG	gene	translation-rna	+	112397	112477	80
ccsA	gene	other	+	112561	113536	975
ndhD	gene	nad-dehydrogenase	−	113770	115300	1530
psaC	gene	photosystem-i	−	115400	115646	246
ndhE	gene	nad-dehydrogenase	−	115901	116207	306
ndhG	gene	nad-dehydrogenase	−	116417	116948	531
ndhI	gene	nad-dehydrogenase	−	117305	117806	501
ndhA	gene	nad-dehydrogenase	−	117886	119974	2088
ndhH	gene	nad-dehydrogenase	−	119975	121157	1182
rps15	gene	ribosomal-protein	−	121253	121526	273
ycf1	gene	other	−	121787	127319	5532
trnN-GUU	gene	translation-rna	+	127648	127720	72
trnR-ACC	gene	translation-rna	−	128276	128350	74
rrn5	gene	ribosomal-rna	−	128584	128705	121
rrn4.5	gene	ribosomal-rna	−	128952	129055	103
rrn23	gene	ribosomal-rna	−	129153	131968	2815
trnA-UGC	gene	translation-rna	−	132137	133017	880
trnI-GAU	gene	translation-rna	−	133082	134101	1019
rrn16	gene	ribosomal-rna	−	134391	135882	1491
trnV-GAC	gene	translation-rna	−	136109	136181	72
rps7	gene	ribosomal-protein	+	138579	139047	468
ndhB	gene	nad-dehydrogenase	+	139320	141532	2212
trnL-CAA	gene	translation-rna	+	142074	142155	81
ycf15	gene	other	−	142415	142613	198
ycf2	gene	other	−	142754	149564	6810
trnI-CAU	gene	translation-rna	+	149652	149726	74
rpl23	gene	ribosomal-protein	+	149885	150167	282
rpl2	gene	ribosomal-protein	+	150185	151668	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW413436.1DNA · accDMW413436DNA · atpBMW413436DNA · matKMW413436DNA · ndhFMW413436DNA · psbAMW413436DNA · rbcLMW413436DNA · rps12MW413436DNA · ycf1MW413436