Coordinate-aware organelle record

Scutellaria hintoniana chloroplast genome

Available MW420959.1 151,030 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	74	74
psbA	gene	photosystem-ii	−	267	1326	1059
trnK-UUU	gene	translation-rna	−	1562	4146	2584
matK	gene	other	−	1853	3392	1539
rps16	gene	ribosomal-protein	−	5065	6218	1153
trnQ-UUC	gene	translation-rna	−	7000	7072	72
psbK	gene	photosystem-ii	+	7397	7583	186
psbI	gene	photosystem-ii	+	7973	8084	111
trnS-GCU	gene	translation-rna	−	8202	8290	88
trnG-UCC	gene	translation-rna	+	8998	9755	757
trnR-UCU	gene	translation-rna	+	9937	10009	72
atpA	gene	atp-synthase	−	10105	11629	1524
atpF	gene	atp-synthase	−	11706	12936	1230
atpH	gene	atp-synthase	−	13294	13540	246
atpI	gene	atp-synthase	−	14530	15274	744
rps2	gene	ribosomal-protein	−	15641	16352	711
rpoC2	gene	rna-polymerase	−	16568	20774	4206
rpoC1	gene	rna-polymerase	−	20928	23766	2838
rpoB	gene	rna-polymerase	−	23792	27020	3228
trnC-GCA	gene	translation-rna	+	28147	28218	71
petN	gene	cytochrome	+	28927	29017	90
psbM	gene	photosystem-ii	−	30008	30113	105
trnD-GUC	gene	translation-rna	−	30639	30713	74
trnY-GUA	gene	translation-rna	−	30826	30910	84
trnE-UUC	gene	translation-rna	−	30969	31042	73
trnT-GGU	gene	translation-rna	+	31617	31689	72
psbD	gene	photosystem-ii	+	32990	34052	1062
psbC	gene	photosystem-ii	+	33999	35421	1422
trnS-UCA	gene	translation-rna	−	35656	35749	93
psbZ	gene	photosystem-ii	+	36075	36264	189
trnG-GCC	gene	translation-rna	+	36522	36593	71
trnfM-CAU	gene	translation-rna	−	36739	36813	74
rps14	gene	ribosomal-protein	−	36962	37265	303
psaB	gene	photosystem-i	−	37392	39597	2205
psaA	gene	photosystem-i	−	39622	41875	2253
ycf3	gene	other	−	42584	44499	1915
trnS-GGA	gene	translation-rna	+	45394	45481	87
rps4	gene	ribosomal-protein	−	45770	46376	606
trnT-UGU	gene	translation-rna	−	46730	46803	73
trnL-UAA	gene	translation-rna	+	47422	47981	559
trnF-GAA	gene	translation-rna	+	48310	48383	73
ndhJ	gene	nad-dehydrogenase	−	49033	49510	477
ndhK	gene	nad-dehydrogenase	−	49617	50295	678
ndhC	gene	nad-dehydrogenase	−	50347	50710	363
trnV-UAC	gene	translation-rna	−	51164	51827	663
trnM-CAU	gene	translation-rna	+	52007	52080	73
atpE	gene	atp-synthase	−	52273	52675	402
atpB	gene	atp-synthase	−	52671	54168	1497
rbcL	gene	other	+	54943	56386	1443
accD	gene	other	+	57098	58577	1479
psaI	gene	photosystem-i	+	59284	59395	111
ycf4	gene	other	+	59820	60375	555
cemA	gene	other	+	61056	61716	660
petA	gene	cytochrome	+	61922	62885	963
psbJ	gene	photosystem-ii	−	63788	63911	123
psbL	gene	photosystem-ii	−	64044	64161	117
psbF	gene	photosystem-ii	−	64184	64304	120
psbE	gene	photosystem-ii	−	64318	64570	252
petL	gene	cytochrome	+	65147	65243	96
petG	gene	cytochrome	+	65417	65531	114
trnW-CCA	gene	translation-rna	−	65649	65723	74
trnP-UGG	gene	translation-rna	−	65882	65956	74
psaJ	gene	photosystem-i	+	66227	66362	135
rpl33	gene	ribosomal-protein	+	66829	67030	201
rps18	gene	ribosomal-protein	+	67184	67490	306
rpl20	gene	ribosomal-protein	−	67727	68114	387
rps12	gene	ribosomal-protein	−	68907	97012	28105
rps12	gene	ribosomal-protein	+	68907	137817	68910
clpP	gene	other	−	69174	71104	1930
psbB	gene	photosystem-ii	+	71563	73090	1527
psbT	gene	photosystem-ii	+	73282	73390	108
psbN	gene	photosystem-ii	−	73450	73582	132
psbH	gene	photosystem-ii	+	73685	73907	222
petB	gene	cytochrome	+	74028	75396	1368
petD	gene	cytochrome	+	75584	76802	1218
rpoA	gene	rna-polymerase	−	76964	77978	1014
rps11	gene	ribosomal-protein	−	78049	78466	417
rpl36	gene	ribosomal-protein	−	78568	78682	114
infA	gene	other	−	78783	79017	234
rps8	gene	ribosomal-protein	−	79136	79547	411
rpl14	gene	ribosomal-protein	−	79711	80080	369
rpl16	gene	ribosomal-protein	−	80207	81439	1232
rps3	gene	ribosomal-protein	−	81586	82255	669
rpl22	gene	ribosomal-protein	−	82256	82712	456
rps19	gene	ribosomal-protein	−	82771	83050	279
rpl2	gene	ribosomal-protein	−	83105	84588	1483
rpl23	gene	ribosomal-protein	−	84606	84888	282
trnI-CAU	gene	translation-rna	−	85047	85121	74
ycf2	gene	other	+	85209	91992	6783
ycf15	gene	other	+	92133	92331	198
trnL-CAA	gene	translation-rna	−	92591	92672	81
ndhB	gene	nad-dehydrogenase	−	93214	95426	2212
rps7	gene	ribosomal-protein	−	95700	96168	468
trnV-GAC	gene	translation-rna	+	98583	98655	72
rrn16	gene	ribosomal-rna	+	98882	100373	1491
trnI-GAU	gene	translation-rna	+	100671	101690	1019
trnA-UGC	gene	translation-rna	+	101761	102650	889
rrn23	gene	ribosomal-rna	+	102819	105632	2813
rrn4.5	gene	ribosomal-rna	+	105730	105833	103
rrn5	gene	ribosomal-rna	+	106080	106201	121
trnR-ACC	gene	translation-rna	+	106435	106509	74
trnN-GUU	gene	translation-rna	+	107065	107137	72
ndhF	gene	nad-dehydrogenase	−	108219	110460	2241
rpl32	gene	ribosomal-protein	+	110975	111152	177
trnL-UAG	gene	translation-rna	+	111583	111663	80
ccsA	gene	other	+	111761	112736	975
ndhD	gene	nad-dehydrogenase	−	112971	114492	1521
psaC	gene	photosystem-i	−	114599	114845	246
ndhE	gene	nad-dehydrogenase	−	115100	115406	306
ndhG	gene	nad-dehydrogenase	−	115627	116158	531
ndhI	gene	nad-dehydrogenase	−	116521	117022	501
ndhA	gene	nad-dehydrogenase	−	117102	119200	2098
ndhH	gene	nad-dehydrogenase	−	119201	120383	1182
rps15	gene	ribosomal-protein	−	120479	120752	273
ycf1	gene	other	−	121028	126572	5544
trnN-GUU	gene	translation-rna	+	126901	126973	72
trnR-ACC	gene	translation-rna	−	127529	127603	74
rrn5	gene	ribosomal-rna	−	127837	127958	121
rrn4.5	gene	ribosomal-rna	−	128205	128308	103
rrn23	gene	ribosomal-rna	−	128406	131219	2813
trnA-UGC	gene	translation-rna	−	131388	132277	889
trnI-GAU	gene	translation-rna	−	132348	133367	1019
rrn16	gene	ribosomal-rna	−	133665	135156	1491
trnV-GAC	gene	translation-rna	−	135383	135455	72
rps7	gene	ribosomal-protein	+	137870	138338	468
ndhB	gene	nad-dehydrogenase	+	138612	140824	2212
trnL-CAA	gene	translation-rna	+	141366	141447	81
ycf15	gene	other	−	141707	141905	198
ycf2	gene	other	−	142046	148829	6783
trnI-CAU	gene	translation-rna	+	148917	148991	74
rpl23	gene	ribosomal-protein	+	149150	149432	282
rpl2	gene	ribosomal-protein	+	149450	150933	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420959.1DNA · accDMW420959DNA · atpBMW420959DNA · matKMW420959DNA · ndhFMW420959DNA · psbAMW420959DNA · rbcLMW420959DNA · rps12MW420959DNA · ycf1MW420959