Coordinate-aware organelle record

Scutellaria immaculata chloroplast genome

Available MW420944.1 152,008 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	374	1433	1059
trnK-UUU	gene	translation-rna	−	1678	4252	2574
matK	gene	other	−	1964	3491	1527
rps16	gene	ribosomal-protein	−	5156	6315	1159
trnQ-UUC	gene	translation-rna	−	7427	7499	72
psbK	gene	photosystem-ii	+	7823	8009	186
psbI	gene	photosystem-ii	+	8396	8507	111
trnS-GCU	gene	translation-rna	−	8623	8711	88
trnG-UCC	gene	translation-rna	+	9282	10030	748
trnR-UCU	gene	translation-rna	+	10204	10276	72
atpA	gene	atp-synthase	−	10372	11896	1524
atpF	gene	atp-synthase	−	11977	13207	1230
atpH	gene	atp-synthase	−	13571	13817	246
atpI	gene	atp-synthase	−	14804	15548	744
rps2	gene	ribosomal-protein	−	15893	16604	711
rpoC2	gene	rna-polymerase	−	16819	21025	4206
rpoC1	gene	rna-polymerase	−	21179	24014	2835
rpoB	gene	rna-polymerase	−	24040	27253	3213
trnC-GCA	gene	translation-rna	+	28413	28484	71
petN	gene	cytochrome	+	29199	29289	90
psbM	gene	photosystem-ii	−	30338	30443	105
trnD-GUC	gene	translation-rna	−	30968	31042	74
trnY-GUA	gene	translation-rna	−	31155	31239	84
trnE-UUC	gene	translation-rna	−	31298	31371	73
trnT-GGU	gene	translation-rna	+	31946	32018	72
psbD	gene	photosystem-ii	+	33317	34379	1062
psbC	gene	photosystem-ii	+	34326	35748	1422
trnS-UCA	gene	translation-rna	−	35984	36077	93
psbZ	gene	photosystem-ii	+	36392	36581	189
trnG-GCC	gene	translation-rna	+	36864	36935	71
trnfM-CAU	gene	translation-rna	−	37087	37161	74
rps14	gene	ribosomal-protein	−	37315	37618	303
psaB	gene	photosystem-i	−	37746	39951	2205
psaA	gene	photosystem-i	−	39976	42229	2253
ycf3	gene	other	−	42928	44848	1920
trnS-GGA	gene	translation-rna	+	45736	45823	87
rps4	gene	ribosomal-protein	−	46097	46703	606
trnT-UGU	gene	translation-rna	−	47043	47116	73
trnL-UAA	gene	translation-rna	+	47800	48361	561
trnF-GAA	gene	translation-rna	+	48668	48741	73
ndhJ	gene	nad-dehydrogenase	−	49389	49866	477
ndhK	gene	nad-dehydrogenase	−	49974	50652	678
ndhC	gene	nad-dehydrogenase	−	50705	51068	363
trnV-UAC	gene	translation-rna	−	52053	52706	653
trnM-CAU	gene	translation-rna	+	52894	52967	73
atpE	gene	atp-synthase	−	53160	53562	402
atpB	gene	atp-synthase	−	53558	55055	1497
rbcL	gene	other	+	55827	57270	1443
accD	gene	other	+	57994	59473	1479
psaI	gene	photosystem-i	+	60179	60290	111
ycf4	gene	other	+	60723	61278	555
cemA	gene	other	+	61966	62626	660
petA	gene	cytochrome	+	62832	63795	963
psbJ	gene	photosystem-ii	−	64793	64916	123
psbL	gene	photosystem-ii	−	65049	65166	117
psbF	gene	photosystem-ii	−	65189	65309	120
psbE	gene	photosystem-ii	−	65323	65575	252
petL	gene	cytochrome	+	66453	66549	96
petG	gene	cytochrome	+	66723	66837	114
trnW-CCA	gene	translation-rna	−	66955	67029	74
trnP-UGG	gene	translation-rna	−	67198	67272	74
psaJ	gene	photosystem-i	+	67543	67678	135
rpl33	gene	ribosomal-protein	+	68155	68356	201
rps18	gene	ribosomal-protein	+	68530	68836	306
rpl20	gene	ribosomal-protein	−	69071	69458	387
rps12	gene	ribosomal-protein	−	70240	98303	28063
rps12	gene	ribosomal-protein	+	70240	138776	68536
clpP	gene	other	−	70508	72435	1927
psbB	gene	photosystem-ii	+	72893	74420	1527
psbT	gene	photosystem-ii	+	74610	74718	108
psbN	gene	photosystem-ii	−	74778	74910	132
psbH	gene	photosystem-ii	+	75013	75235	222
petB	gene	cytochrome	+	75359	76728	1369
petD	gene	cytochrome	+	76910	78116	1206
rpoA	gene	rna-polymerase	−	78448	79270	822
rps11	gene	ribosomal-protein	−	79341	79758	417
rpl36	gene	ribosomal-protein	−	79859	79973	114
infA	gene	other	−	80067	80301	234
rps8	gene	ribosomal-protein	−	80423	80834	411
rpl14	gene	ribosomal-protein	−	80984	81353	369
rpl16	gene	ribosomal-protein	−	81479	82713	1234
rps3	gene	ribosomal-protein	−	82868	83531	663
rpl22	gene	ribosomal-protein	−	83532	83988	456
rps19	gene	ribosomal-protein	−	84047	84326	279
rpl2	gene	ribosomal-protein	−	84380	85862	1482
rpl23	gene	ribosomal-protein	−	85880	86162	282
trnI-CAU	gene	translation-rna	−	86321	86395	74
ycf2	gene	other	+	86483	93284	6801
ycf15	gene	other	+	93425	93623	198
trnL-CAA	gene	translation-rna	−	93882	93963	81
ndhB	gene	nad-dehydrogenase	−	94505	96717	2212
rps7	gene	ribosomal-protein	−	96991	97459	468
trnV-GAC	gene	translation-rna	+	99874	99946	72
rrn16	gene	ribosomal-rna	+	100172	101663	1491
trnI-GAU	gene	translation-rna	+	101961	102981	1020
trnA-UGC	gene	translation-rna	+	103046	103926	880
rrn23	gene	ribosomal-rna	+	104088	106900	2812
rrn4.5	gene	ribosomal-rna	+	106998	107101	103
rrn5	gene	ribosomal-rna	+	107348	107469	121
trnR-ACC	gene	translation-rna	+	107703	107777	74
trnN-GUU	gene	translation-rna	+	108325	108397	72
ndhF	gene	nad-dehydrogenase	−	109453	111715	2262
rpl32	gene	ribosomal-protein	+	112042	112219	177
trnL-UAG	gene	translation-rna	+	112666	112746	80
ccsA	gene	other	+	112830	113805	975
ndhD	gene	nad-dehydrogenase	−	114044	115574	1530
psaC	gene	photosystem-i	−	115674	115920	246
ndhE	gene	nad-dehydrogenase	−	116175	116481	306
ndhG	gene	nad-dehydrogenase	−	116697	117228	531
ndhI	gene	nad-dehydrogenase	−	117593	118094	501
ndhA	gene	nad-dehydrogenase	−	118174	120287	2113
ndhH	gene	nad-dehydrogenase	−	120288	121470	1182
rps15	gene	ribosomal-protein	−	121566	121839	273
ycf1	gene	other	−	122036	127562	5526
trnN-GUU	gene	translation-rna	+	127891	127963	72
trnR-ACC	gene	translation-rna	−	128511	128585	74
rrn5	gene	ribosomal-rna	−	128819	128940	121
rrn4.5	gene	ribosomal-rna	−	129187	129290	103
rrn23	gene	ribosomal-rna	−	129388	132200	2812
trnA-UGC	gene	translation-rna	−	132362	133242	880
trnI-GAU	gene	translation-rna	−	133307	134327	1020
rrn16	gene	ribosomal-rna	−	134625	136116	1491
trnV-GAC	gene	translation-rna	−	136342	136414	72
rps7	gene	ribosomal-protein	+	138829	139297	468
ndhB	gene	nad-dehydrogenase	+	139571	141783	2212
trnL-CAA	gene	translation-rna	+	142325	142406	81
ycf15	gene	other	−	142665	142863	198
ycf2	gene	other	−	143004	149805	6801
trnI-CAU	gene	translation-rna	+	149893	149967	74
rpl23	gene	ribosomal-protein	+	150126	150408	282
rpl2	gene	ribosomal-protein	+	150426	151908	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420944.1DNA · accDMW420944DNA · atpBMW420944DNA · matKMW420944DNA · ndhFMW420944DNA · psbAMW420944DNA · rbcLMW420944DNA · rps12MW420944DNA · ycf1MW420944