Coordinate-aware organelle record

Scutellaria indica chloroplast genome

Available NC_072111.1 152,003 bp 124 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

124 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	375	1434	1059
trnK-UUU	gene	translation-rna	−	1671	4252	2581
matK	gene	other	−	1962	3309	1347
rps16	gene	ribosomal-protein	−	5128	6298	1170
psbK	gene	photosystem-ii	+	7713	7899	186
psbI	gene	photosystem-ii	+	8291	8402	111
trnS-GCU	gene	translation-rna	−	8512	8600	88
trnR-UCU	gene	translation-rna	+	10215	10287	72
atpA	gene	atp-synthase	−	10383	11907	1524
atpF	gene	atp-synthase	−	11990	13218	1228
atpH	gene	atp-synthase	−	13574	13820	246
atpI	gene	atp-synthase	−	14816	15560	744
rps2	gene	ribosomal-protein	−	15908	16619	711
rpoC2	gene	rna-polymerase	−	16835	21041	4206
rpoC1	gene	rna-polymerase	−	21195	24024	2829
rpoB	gene	rna-polymerase	−	24050	27263	3213
trnC-GCA	gene	translation-rna	+	28427	28498	71
petN	gene	cytochrome	+	29209	29299	90
psbM	gene	photosystem-ii	−	30304	30409	105
trnD-GUC	gene	translation-rna	−	30935	31009	74
trnY-GUA	gene	translation-rna	−	31122	31206	84
trnE-UUC	gene	translation-rna	−	31265	31338	73
trnT-GGU	gene	translation-rna	+	31810	31882	72
psbD	gene	photosystem-ii	+	33189	34251	1062
psbC	gene	photosystem-ii	+	34198	35620	1422
psbZ	gene	photosystem-ii	+	36266	36455	189
trnG-GCC	gene	translation-rna	+	36726	36797	71
rps14	gene	ribosomal-protein	−	37174	37477	303
psaB	gene	photosystem-i	−	37604	39809	2205
psaA	gene	photosystem-i	−	39834	42087	2253
ycf3	gene	other	−	42758	44680	1922
trnS-GGA	gene	translation-rna	+	45557	45644	87
rps4	gene	ribosomal-protein	−	45929	46535	606
trnT-UGU	gene	translation-rna	−	46875	46948	73
trnL-UAA	gene	translation-rna	+	47632	48193	561
trnF-GAA	gene	translation-rna	+	48498	48571	73
ndhJ	gene	nad-dehydrogenase	−	49219	49696	477
ndhK	gene	nad-dehydrogenase	−	49803	50481	678
ndhC	gene	nad-dehydrogenase	−	50533	50896	363
trnV-UAC	gene	translation-rna	−	51751	52405	654
trnM-CAU	gene	translation-rna	+	52585	52658	73
atpE	gene	atp-synthase	−	52873	53275	402
atpB	gene	atp-synthase	−	53271	54759	1488
rbcL	gene	other	+	55531	56974	1443
accD	gene	other	+	57707	59174	1467
psaI	gene	photosystem-i	+	59748	59859	111
ycf4	gene	other	+	60284	60839	555
cemA	gene	other	+	61576	62176	600
petA	gene	cytochrome	+	62382	63345	963
psbL	gene	photosystem-ii	−	64634	64751	117
psbF	gene	photosystem-ii	−	64774	64894	120
psbE	gene	photosystem-ii	−	64908	65160	252
petL	gene	cytochrome	+	66068	66164	96
petG	gene	cytochrome	+	66339	66453	114
trnW-CCA	gene	translation-rna	−	66571	66645	74
trnP-UGG	gene	translation-rna	−	66814	66888	74
psaJ	gene	photosystem-i	+	67160	67295	135
rpl33	gene	ribosomal-protein	+	67768	67969	201
rps18	gene	ribosomal-protein	+	68143	68449	306
rpl20	gene	ribosomal-protein	−	68685	69072	387
rps12	gene	ribosomal-protein	−	69871	98029	28158
rps12	gene	ribosomal-protein	+	69871	138220	68349
clpP	gene	other	−	70127	72060	1933
psbB	gene	photosystem-ii	+	72526	74053	1527
psbT	gene	photosystem-ii	+	74244	74346	102
psbN	gene	photosystem-ii	−	74426	74558	132
psbH	gene	photosystem-ii	+	74661	74883	222
petB	gene	cytochrome	+	75007	76375	1368
petD	gene	cytochrome	+	76563	77765	1202
rpoA	gene	rna-polymerase	−	77927	78941	1014
rps11	gene	ribosomal-protein	−	79012	79429	417
infA	gene	other	−	79739	79973	234
rps8	gene	ribosomal-protein	−	80093	80504	411
rpl14	gene	ribosomal-protein	−	80672	81041	369
rpl16	gene	ribosomal-protein	−	81167	82431	1264
rps3	gene	ribosomal-protein	−	82585	83248	663
rpl22	gene	ribosomal-protein	−	83249	83705	456
rps19	gene	ribosomal-protein	−	83764	84043	279
rpl2	gene	ribosomal-protein	−	84097	85580	1483
rpl23	gene	ribosomal-protein	−	85598	85880	282
trnI-GAU	gene	translation-rna	−	86039	86113	74
ycf2	gene	other	+	86201	93011	6810
ycf15	gene	other	+	93152	93350	198
trnL-CAA	gene	translation-rna	−	93605	93686	81
ndhB	gene	nad-dehydrogenase	−	94228	96440	2212
rps7	gene	ribosomal-protein	−	96714	97182	468
trnV-GAC	gene	translation-rna	+	99595	99667	72
rrn16S	gene	ribosomal-rna	+	99894	101385	1491
trnI-GAU	gene	translation-rna	+	101683	102703	1020
trnA-UGC	gene	translation-rna	+	102768	103651	883
rrn23S	gene	ribosomal-rna	+	103820	106633	2813
rrn4.5S	gene	ribosomal-rna	+	106731	106834	103
rrn5S	gene	ribosomal-rna	+	107081	107202	121
trnN-GUU	gene	translation-rna	+	108056	108128	72
ndhF	gene	nad-dehydrogenase	−	109204	111445	2241
rpl32	gene	ribosomal-protein	+	111965	112142	177
trnL-UAG	gene	translation-rna	+	112587	112667	80
ccsA	gene	other	+	112763	113738	975
ndhD	gene	nad-dehydrogenase	−	113970	115476	1506
psaC	gene	photosystem-i	−	115592	115838	246
ndhE	gene	nad-dehydrogenase	−	116094	116400	306
ndhG	gene	nad-dehydrogenase	−	116630	117161	531
ndhI	gene	nad-dehydrogenase	−	117525	118026	501
ndhA	gene	nad-dehydrogenase	−	118106	120199	2093
ndhH	gene	nad-dehydrogenase	−	120200	121382	1182
rps15	gene	ribosomal-protein	−	121484	121757	273
ycf1	gene	other	−	122023	127549	5526
trnN-GUU	gene	translation-rna	−	127878	127950	72
rrn5S	gene	ribosomal-rna	−	128804	128925	121
rrn4.5S	gene	ribosomal-rna	−	129172	129275	103
rrn23S	gene	ribosomal-rna	−	129373	132186	2813
trnA-UGC	gene	translation-rna	−	132355	133238	883
trnI-GAU	gene	translation-rna	−	133303	134323	1020
rrn16S	gene	ribosomal-rna	−	134621	136112	1491
trnV-GAC	gene	translation-rna	−	136339	136411	72
rps7	gene	ribosomal-protein	+	138824	139292	468
ndhB	gene	nad-dehydrogenase	+	139566	141778	2212
trnL-CAA	gene	translation-rna	+	142320	142401	81
ycf15	gene	other	−	142656	142854	198
ycf2	gene	other	−	142995	149805	6810
trnI-GAU	gene	translation-rna	+	149893	149967	74
rpl23	gene	ribosomal-protein	+	150126	150408	282
rpl2	gene	ribosomal-protein	+	150426	151909	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_072111.1DNA · accDNC_072111DNA · atpBNC_072111DNA · matKNC_072111DNA · ndhFNC_072111DNA · psbANC_072111DNA · rbcLNC_072111DNA · rps12NC_072111DNA · ycf1NC_072111