Coordinate-aware organelle record

Scutellaria likiangensis chloroplast genome

Available NC_061416.1 151,761 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	11	86	75
psbA	gene	photosystem-ii	−	377	1436	1059
trnK-UUU	gene	translation-rna	−	1677	4245	2568
matK	gene	other	−	1967	3497	1530
rps16	gene	ribosomal-protein	−	5143	6323	1180
trnQ-UUG	gene	translation-rna	−	7472	7544	72
psbK	gene	photosystem-ii	+	7868	8054	186
psbI	gene	photosystem-ii	+	8441	8552	111
trnS-GCU	gene	translation-rna	−	8665	8753	88
trnG-UCC	gene	translation-rna	+	9383	10135	752
trnR-UCU	gene	translation-rna	+	10309	10381	72
atpA	gene	atp-synthase	−	10477	12001	1524
atpF	gene	atp-synthase	−	12084	13313	1229
atpH	gene	atp-synthase	−	13674	13920	246
atpI	gene	atp-synthase	−	14909	15653	744
psaI	gene	photosystem-i	−	15860	15920	60
rps2	gene	ribosomal-protein	−	15999	16710	711
rpoC2	gene	rna-polymerase	−	16924	21118	4194
rpoC1	gene	rna-polymerase	−	21284	24108	2824
rpoB	gene	rna-polymerase	−	24134	27347	3213
trnC-GCA	gene	translation-rna	+	28508	28579	71
petN	gene	cytochrome	+	28867	28957	90
psbM	gene	photosystem-ii	−	30039	30144	105
trnD-GUC	gene	translation-rna	−	30670	30744	74
trnY-GUA	gene	translation-rna	−	30862	30946	84
trnE-UUC	gene	translation-rna	−	31005	31078	73
trnT-GGU	gene	translation-rna	+	31653	31725	72
psbD	gene	photosystem-ii	+	32829	33891	1062
psbC	gene	photosystem-ii	+	33874	35260	1386
trnS-UGA	gene	translation-rna	−	35496	35589	93
psbZ	gene	photosystem-ii	+	35904	36093	189
trnG-GCC	gene	translation-rna	+	36367	36438	71
trnfM-CAU	gene	translation-rna	−	36582	36656	74
rps14	gene	ribosomal-protein	−	36810	37113	303
psaB	gene	photosystem-i	−	37240	39445	2205
psaA	gene	photosystem-i	−	39470	41723	2253
pafI	gene	other	−	42410	44341	1931
trnS-GGA	gene	translation-rna	+	45245	45332	87
rps4	gene	ribosomal-protein	−	45613	46219	606
trnT-UGU	gene	translation-rna	−	46565	46638	73
trnL-UAA	gene	translation-rna	+	47341	47908	567
trnF-GAA	gene	translation-rna	+	48215	48288	73
ndhJ	gene	nad-dehydrogenase	−	48934	49411	477
ndhK	gene	nad-dehydrogenase	−	49519	50197	678
ndhC	gene	nad-dehydrogenase	−	50250	50613	363
trnV-UAC	gene	translation-rna	−	51605	52258	653
trnM-CAU	gene	translation-rna	+	52446	52519	73
atpE	gene	atp-synthase	−	52727	53129	402
atpB	gene	atp-synthase	−	53125	54622	1497
rbcL	gene	other	+	55387	56830	1443
accD	gene	other	+	57547	59026	1479
psaI	gene	photosystem-i	+	59769	59880	111
pafII	gene	other	+	60313	60868	555
cemA	gene	other	+	61486	62209	723
petA	gene	cytochrome	+	62410	63373	963
psbJ	gene	photosystem-ii	−	64384	64507	123
psbL	gene	photosystem-ii	−	64640	64757	117
psbF	gene	photosystem-ii	−	64780	64900	120
psbE	gene	photosystem-ii	−	64914	65166	252
petL	gene	cytochrome	+	66027	66123	96
petG	gene	cytochrome	+	66298	66412	114
trnW-CCA	gene	translation-rna	−	66530	66604	74
trnP-UGG	gene	translation-rna	−	66767	66841	74
psaJ	gene	photosystem-i	+	67110	67245	135
rpl33	gene	ribosomal-protein	+	67719	67920	201
rps18	gene	ribosomal-protein	+	68094	68400	306
rpl20	gene	ribosomal-protein	−	68633	69020	387
rps12	gene	ribosomal-protein	−	69816	97932	28116
rps12	gene	ribosomal-protein	+	69816	138509	68693
clpP1	gene	other	−	70082	72022	1940
psbB	gene	photosystem-ii	+	72479	74006	1527
psbT	gene	photosystem-ii	+	74203	74311	108
pbf1	gene	other	−	74371	74503	132
psbH	gene	photosystem-ii	+	74606	74828	222
petB	gene	cytochrome	+	74952	76320	1368
petD	gene	cytochrome	+	76508	77705	1197
rpoA	gene	rna-polymerase	−	77867	78881	1014
rps11	gene	ribosomal-protein	−	78952	79369	417
rpl36	gene	ribosomal-protein	−	79470	79584	114
infA	gene	other	−	79678	79912	234
rps8	gene	ribosomal-protein	−	80035	80446	411
rpl14	gene	ribosomal-protein	−	80602	80971	369
rpl16	gene	ribosomal-protein	−	81097	82330	1233
rps3	gene	ribosomal-protein	−	82484	83147	663
rpl22	gene	ribosomal-protein	−	83148	83604	456
rps19	gene	ribosomal-protein	−	83663	83942	279
rpl2	gene	ribosomal-protein	−	83997	85479	1482
rpl23	gene	ribosomal-protein	−	85497	85779	282
trnI-CAU	gene	translation-rna	−	85938	86012	74
ycf2	gene	other	+	86100	92910	6810
ycf15	gene	other	+	93000	93249	249
trnL-CAA	gene	translation-rna	−	93508	93589	81
ndhB	gene	nad-dehydrogenase	−	94131	96343	2212
rps7	gene	ribosomal-protein	−	96617	97085	468
trnV-GAC	gene	translation-rna	+	99494	99566	72
rrn16	gene	ribosomal-rna	+	99792	101283	1491
trnI-GAU	gene	translation-rna	+	101581	102602	1021
trnA-UGC	gene	translation-rna	+	102665	103556	891
rrn23	gene	ribosomal-rna	+	103725	106537	2812
rrn4.5	gene	ribosomal-rna	+	106635	106738	103
rrn5	gene	ribosomal-rna	+	106985	107106	121
trnR-ACG	gene	translation-rna	+	107340	107414	74
trnN-GUU	gene	translation-rna	−	107970	108042	72
ycf1	gene	other	+	108371	109154	783
ndhF	gene	nad-dehydrogenase	−	109118	111359	2241
rpl32	gene	ribosomal-protein	+	111879	112056	177
trnL-UAG	gene	translation-rna	+	112341	112421	80
ccsA	gene	other	+	112515	113490	975
ndhD	gene	nad-dehydrogenase	−	113723	115226	1503
psaC	gene	photosystem-i	−	115352	115598	246
ndhE	gene	nad-dehydrogenase	−	115853	116159	306
ndhG	gene	nad-dehydrogenase	−	116380	116911	531
ndhI	gene	nad-dehydrogenase	−	117273	117774	501
ndhA	gene	nad-dehydrogenase	−	117854	119962	2108
ndhH	gene	nad-dehydrogenase	−	119963	121145	1182
rps15	gene	ribosomal-protein	−	121241	121514	273
ycf1	gene	other	−	121729	127276	5547
trnN-GUU	gene	translation-rna	+	127605	127677	72
trnR-ACG	gene	translation-rna	−	128233	128307	74
rrn5	gene	ribosomal-rna	−	128541	128662	121
rrn4.5	gene	ribosomal-rna	−	128909	129012	103
rrn23	gene	ribosomal-rna	−	129110	131922	2812
trnA-UGC	gene	translation-rna	−	132091	132982	891
trnI-GAU	gene	translation-rna	−	133045	134066	1021
rrn16	gene	ribosomal-rna	−	134364	135855	1491
trnV-GAC	gene	translation-rna	−	136081	136153	72
rps7	gene	ribosomal-protein	+	138562	139030	468
ndhB	gene	nad-dehydrogenase	+	139304	141516	2212
trnL-CAA	gene	translation-rna	+	142058	142139	81
ycf15	gene	other	−	142398	142647	249
ycf2	gene	other	−	142737	149547	6810
trnI-CAU	gene	translation-rna	+	149635	149709	74
rpl23	gene	ribosomal-protein	+	149868	150150	282
rpl2	gene	ribosomal-protein	+	150168	151650	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_061416.1DNA · accDNC_061416DNA · atpBNC_061416DNA · matKNC_061416DNA · ndhFNC_061416DNA · psbANC_061416DNA · rbcLNC_061416DNA · rps12NC_061416DNA · ycf1NC_061416