Coordinate-aware organelle record

Scutellaria longifolia chloroplast genome

Available MW420966.1 151,742 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1676	4266	2590
matK	gene	other	−	1967	3512	1545
rps16	gene	ribosomal-protein	−	5176	6304	1128
trnQ-UUC	gene	translation-rna	−	7434	7506	72
psbK	gene	photosystem-ii	+	7830	8016	186
psbI	gene	photosystem-ii	+	8417	8528	111
trnS-GCU	gene	translation-rna	−	8638	8726	88
trnG-UCC	gene	translation-rna	+	9411	10158	747
trnR-UCU	gene	translation-rna	+	10338	10410	72
atpA	gene	atp-synthase	−	10506	12030	1524
atpF	gene	atp-synthase	−	12113	13343	1230
atpH	gene	atp-synthase	−	13704	13950	246
atpI	gene	atp-synthase	−	14939	15683	744
rps2	gene	ribosomal-protein	−	16025	16736	711
rpoC2	gene	rna-polymerase	−	16952	21158	4206
rpoC1	gene	rna-polymerase	−	21303	24114	2811
rpoB	gene	rna-polymerase	−	24140	27353	3213
trnC-GCA	gene	translation-rna	+	28505	28576	71
petN	gene	cytochrome	+	29287	29377	90
psbM	gene	photosystem-ii	−	30384	30498	114
trnD-GUC	gene	translation-rna	−	31024	31098	74
trnY-GUA	gene	translation-rna	−	31211	31295	84
trnE-UUC	gene	translation-rna	−	31354	31427	73
trnT-GGU	gene	translation-rna	+	31990	32062	72
psbD	gene	photosystem-ii	+	33355	34417	1062
psbC	gene	photosystem-ii	+	34364	35786	1422
trnS-UCA	gene	translation-rna	−	36030	36123	93
psbZ	gene	photosystem-ii	+	36442	36631	189
trnG-GCC	gene	translation-rna	+	36902	36973	71
trnfM-CAU	gene	translation-rna	−	37116	37190	74
rps14	gene	ribosomal-protein	−	37339	37642	303
psaB	gene	photosystem-i	−	37769	39974	2205
psaA	gene	photosystem-i	−	39999	42252	2253
ycf3	gene	other	−	42951	44875	1924
trnS-GGA	gene	translation-rna	+	45757	45844	87
rps4	gene	ribosomal-protein	−	46127	46733	606
trnT-UGU	gene	translation-rna	−	47067	47140	73
trnL-UAA	gene	translation-rna	+	47809	48377	568
trnF-GAA	gene	translation-rna	+	48680	48753	73
ndhJ	gene	nad-dehydrogenase	−	49401	49878	477
ndhK	gene	nad-dehydrogenase	−	50021	50663	642
ndhC	gene	nad-dehydrogenase	−	50716	51079	363
trnV-UAC	gene	translation-rna	−	51535	52189	654
trnM-CAU	gene	translation-rna	+	52369	52442	73
atpE	gene	atp-synthase	−	52650	53052	402
atpB	gene	atp-synthase	−	53048	54545	1497
rbcL	gene	other	+	55317	56760	1443
accD	gene	other	+	57480	58959	1479
psaI	gene	photosystem-i	+	59670	59781	111
ycf4	gene	other	+	60206	60761	555
cemA	gene	other	+	61413	62103	690
petA	gene	cytochrome	+	62309	63272	963
psbJ	gene	photosystem-ii	−	64295	64418	123
psbL	gene	photosystem-ii	−	64551	64668	117
psbF	gene	photosystem-ii	−	64691	64811	120
psbE	gene	photosystem-ii	−	64825	65077	252
petL	gene	cytochrome	+	65974	66070	96
petG	gene	cytochrome	+	66245	66359	114
trnW-CCA	gene	translation-rna	−	66477	66551	74
trnP-UGG	gene	translation-rna	−	66720	66794	74
psaJ	gene	photosystem-i	+	67067	67202	135
rpl33	gene	ribosomal-protein	+	67689	67890	201
rps18	gene	ribosomal-protein	+	68064	68370	306
rpl20	gene	ribosomal-protein	−	68607	68994	387
rps12	gene	ribosomal-protein	−	69778	97897	28119
rps12	gene	ribosomal-protein	+	69778	138507	68729
clpP	gene	other	−	70045	71988	1943
psbB	gene	photosystem-ii	+	72451	73978	1527
psbT	gene	photosystem-ii	+	74169	74277	108
psbN	gene	photosystem-ii	−	74337	74469	132
psbH	gene	photosystem-ii	+	74572	74794	222
petB	gene	cytochrome	+	74919	76289	1370
petD	gene	cytochrome	+	76477	77676	1199
rpoA	gene	rna-polymerase	−	77838	78849	1011
rps11	gene	ribosomal-protein	−	78920	79337	417
rpl36	gene	ribosomal-protein	−	79437	79551	114
infA	gene	other	−	79646	79880	234
rps8	gene	ribosomal-protein	−	79996	80407	411
rpl14	gene	ribosomal-protein	−	80575	80944	369
rpl16	gene	ribosomal-protein	−	81055	82300	1245
rps3	gene	ribosomal-protein	−	82454	83117	663
rpl22	gene	ribosomal-protein	−	83118	83574	456
rps19	gene	ribosomal-protein	−	83633	83912	279
rpl2	gene	ribosomal-protein	−	83966	85455	1489
rpl23	gene	ribosomal-protein	−	85473	85755	282
trnI-CAU	gene	translation-rna	−	85914	85988	74
ycf2	gene	other	+	86076	92886	6810
ycf15	gene	other	+	93027	93225	198
trnL-CAA	gene	translation-rna	−	93485	93566	81
ndhB	gene	nad-dehydrogenase	−	94099	96311	2212
rps7	gene	ribosomal-protein	−	96585	97053	468
trnV-GAC	gene	translation-rna	+	99467	99539	72
rrn16	gene	ribosomal-rna	+	99766	101257	1491
trnI-GAU	gene	translation-rna	+	101555	102574	1019
trnA-UGC	gene	translation-rna	+	102639	103527	888
rrn23	gene	ribosomal-rna	+	103696	106509	2813
rrn4.5	gene	ribosomal-rna	+	106607	106710	103
rrn5	gene	ribosomal-rna	+	106957	107078	121
trnR-ACC	gene	translation-rna	+	107312	107386	74
trnN-GUU	gene	translation-rna	+	107942	108014	72
ndhF	gene	nad-dehydrogenase	−	109070	111299	2229
rpl32	gene	ribosomal-protein	+	111801	111978	177
trnL-UAG	gene	translation-rna	+	112413	112493	80
ccsA	gene	other	+	112597	113572	975
ndhD	gene	nad-dehydrogenase	−	113804	115115	1311
psaC	gene	photosystem-i	−	115433	115679	246
ndhE	gene	nad-dehydrogenase	−	115917	116223	306
ndhG	gene	nad-dehydrogenase	−	116444	116975	531
ndhI	gene	nad-dehydrogenase	−	117337	117838	501
ndhA	gene	nad-dehydrogenase	−	117918	120019	2101
ndhH	gene	nad-dehydrogenase	−	120020	121202	1182
rps15	gene	ribosomal-protein	−	121290	121563	273
ycf1	gene	other	−	121849	127270	5421
trnN-GUU	gene	translation-rna	+	127599	127671	72
trnR-ACC	gene	translation-rna	−	128227	128301	74
rrn5	gene	ribosomal-rna	−	128535	128656	121
rrn4.5	gene	ribosomal-rna	−	128903	129006	103
rrn23	gene	ribosomal-rna	−	129104	131917	2813
trnA-UGC	gene	translation-rna	−	132086	132974	888
trnI-GAU	gene	translation-rna	−	133039	134058	1019
rrn16	gene	ribosomal-rna	−	134356	135847	1491
trnV-GAC	gene	translation-rna	−	136074	136146	72
rps7	gene	ribosomal-protein	+	138560	139028	468
ndhB	gene	nad-dehydrogenase	+	139302	141514	2212
trnL-CAA	gene	translation-rna	+	142047	142128	81
ycf15	gene	other	−	142388	142586	198
ycf2	gene	other	−	142727	149537	6810
trnI-CAU	gene	translation-rna	+	149625	149699	74
rpl23	gene	ribosomal-protein	+	149858	150140	282
rpl2	gene	ribosomal-protein	+	150158	151647	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420966.1DNA · accDMW420966DNA · atpBMW420966DNA · matKMW420966DNA · ndhFMW420966DNA · psbAMW420966DNA · rbcLMW420966DNA · rps12MW420966DNA · ycf1MW420966