Coordinate-aware organelle record

Scutellaria pinnatifida subsp. pichleri chloroplast genome

Available MW420935.1 151,551 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1677	4251	2574
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5157	6318	1161
trnQ-UUC	gene	translation-rna	−	7053	7125	72
psbK	gene	photosystem-ii	+	7449	7635	186
psbI	gene	photosystem-ii	+	8024	8135	111
trnS-GCU	gene	translation-rna	−	8253	8341	88
trnG-UCC	gene	translation-rna	+	9041	9798	757
trnR-UCU	gene	translation-rna	+	9972	10044	72
atpA	gene	atp-synthase	−	10140	11664	1524
atpF	gene	atp-synthase	−	11745	12975	1230
atpH	gene	atp-synthase	−	13330	13576	246
atpI	gene	atp-synthase	−	14563	15307	744
rps2	gene	ribosomal-protein	−	15652	16363	711
rpoC2	gene	rna-polymerase	−	16578	20784	4206
rpoC1	gene	rna-polymerase	−	20938	23775	2837
rpoB	gene	rna-polymerase	−	23801	27014	3213
trnC-GCA	gene	translation-rna	+	28174	28245	71
petN	gene	cytochrome	+	28962	29052	90
psbM	gene	photosystem-ii	−	30042	30147	105
trnD-GUC	gene	translation-rna	−	30672	30746	74
trnY-GUA	gene	translation-rna	−	30859	30943	84
trnE-UUC	gene	translation-rna	−	31002	31075	73
trnT-GGU	gene	translation-rna	+	31650	31722	72
psbD	gene	photosystem-ii	+	33027	34089	1062
psbC	gene	photosystem-ii	+	34036	35458	1422
trnS-UCA	gene	translation-rna	−	35692	35785	93
psbZ	gene	photosystem-ii	+	36100	36289	189
trnG-GCC	gene	translation-rna	+	36566	36637	71
trnfM-CAU	gene	translation-rna	−	36783	36857	74
rps14	gene	ribosomal-protein	−	37011	37314	303
psaB	gene	photosystem-i	−	37442	39647	2205
psaA	gene	photosystem-i	−	39672	41925	2253
ycf3	gene	other	−	42627	44549	1922
trnS-GGA	gene	translation-rna	+	45431	45518	87
rps4	gene	ribosomal-protein	−	45793	46399	606
trnT-UGU	gene	translation-rna	−	46740	46813	73
trnL-UAA	gene	translation-rna	+	47493	48054	561
trnF-GAA	gene	translation-rna	+	48356	48429	73
ndhJ	gene	nad-dehydrogenase	−	49070	49547	477
ndhK	gene	nad-dehydrogenase	−	49655	50333	678
ndhC	gene	nad-dehydrogenase	−	50386	50749	363
trnV-UAC	gene	translation-rna	−	51734	52387	653
trnM-CAU	gene	translation-rna	+	52575	52648	73
atpE	gene	atp-synthase	−	52841	53243	402
atpB	gene	atp-synthase	−	53239	54736	1497
rbcL	gene	other	+	55497	56940	1443
accD	gene	other	+	57654	59133	1479
psaI	gene	photosystem-i	+	59679	59790	111
ycf4	gene	other	+	60223	60778	555
cemA	gene	other	+	61466	62126	660
petA	gene	cytochrome	+	62332	63295	963
psbJ	gene	photosystem-ii	−	64304	64427	123
psbL	gene	photosystem-ii	−	64560	64677	117
psbF	gene	photosystem-ii	−	64700	64820	120
psbE	gene	photosystem-ii	−	64834	65086	252
petL	gene	cytochrome	+	65963	66059	96
petG	gene	cytochrome	+	66234	66348	114
trnW-CCA	gene	translation-rna	−	66466	66540	74
trnP-UGG	gene	translation-rna	−	66709	66783	74
psaJ	gene	photosystem-i	+	67054	67189	135
rpl33	gene	ribosomal-protein	+	67672	67873	201
rps18	gene	ribosomal-protein	+	68047	68353	306
rpl20	gene	ribosomal-protein	−	68587	68974	387
rps12	gene	ribosomal-protein	−	69753	97819	28066
rps12	gene	ribosomal-protein	+	69753	138319	68566
rps12	CDS	ribosomal-protein	−	69756	97819	28063
rps12	CDS	ribosomal-protein	+	69756	138319	68563
clpP	gene	other	−	70023	71952	1929
psbB	gene	photosystem-ii	+	72403	73930	1527
psbT	gene	photosystem-ii	+	74121	74229	108
psbN	gene	photosystem-ii	−	74289	74421	132
psbH	gene	photosystem-ii	+	74524	74746	222
petB	gene	cytochrome	+	74870	76239	1369
petD	gene	cytochrome	+	76421	77628	1207
rpoA	gene	rna-polymerase	−	77790	78783	993
rps11	gene	ribosomal-protein	−	78854	79271	417
rpl36	gene	ribosomal-protein	−	79372	79486	114
infA	gene	other	−	79580	79814	234
rps8	gene	ribosomal-protein	−	79937	80348	411
rpl14	gene	ribosomal-protein	−	80500	80869	369
rpl16	gene	ribosomal-protein	−	80995	82229	1234
rps3	gene	ribosomal-protein	−	82384	83047	663
rpl22	gene	ribosomal-protein	−	83048	83504	456
rps19	gene	ribosomal-protein	−	83563	83842	279
rpl2	gene	ribosomal-protein	−	83896	85378	1482
rpl23	gene	ribosomal-protein	−	85396	85678	282
trnI-CAU	gene	translation-rna	−	85837	85911	74
ycf2	gene	other	+	85999	92800	6801
ycf15	gene	other	+	92875	93139	264
trnL-CAA	gene	translation-rna	−	93398	93479	81
ndhB	gene	nad-dehydrogenase	−	94021	96233	2212
rps7	gene	ribosomal-protein	−	96507	96975	468
trnV-GAC	gene	translation-rna	+	99390	99462	72
rrn16	gene	ribosomal-rna	+	99688	101179	1491
trnI-GAU	gene	translation-rna	+	101477	102497	1020
trnA-UGC	gene	translation-rna	+	102562	103449	887
rrn23	gene	ribosomal-rna	+	103611	106423	2812
rrn4.5	gene	ribosomal-rna	+	106521	106624	103
rrn5	gene	ribosomal-rna	+	106871	106992	121
trnR-ACC	gene	translation-rna	+	107226	107300	74
trnN-GUU	gene	translation-rna	+	107848	107920	72
ndhF	gene	nad-dehydrogenase	−	108976	111238	2262
rpl32	gene	ribosomal-protein	+	111564	111741	177
trnL-UAG	gene	translation-rna	+	112182	112262	80
ccsA	gene	other	+	112350	113325	975
ndhD	gene	nad-dehydrogenase	−	113564	115085	1521
psaC	gene	photosystem-i	−	115194	115440	246
ndhE	gene	nad-dehydrogenase	−	115695	116001	306
ndhG	gene	nad-dehydrogenase	−	116217	116748	531
ndhI	gene	nad-dehydrogenase	−	117115	117616	501
ndhA	gene	nad-dehydrogenase	−	117701	119823	2122
ndhH	gene	nad-dehydrogenase	−	119824	121006	1182
rps15	gene	ribosomal-protein	−	121102	121375	273
ycf1	gene	other	−	121572	127098	5526
trnN-GUU	gene	translation-rna	+	127427	127499	72
trnR-ACC	gene	translation-rna	−	128047	128121	74
rrn5	gene	ribosomal-rna	−	128355	128476	121
rrn4.5	gene	ribosomal-rna	−	128723	128826	103
rrn23	gene	ribosomal-rna	−	128924	131736	2812
trnA-UGC	gene	translation-rna	−	131898	132785	887
trnI-GAU	gene	translation-rna	−	132850	133870	1020
rrn16	gene	ribosomal-rna	−	134168	135659	1491
trnV-GAC	gene	translation-rna	−	135885	135957	72
rps7	gene	ribosomal-protein	+	138372	138840	468
ndhB	gene	nad-dehydrogenase	+	139114	141326	2212
trnL-CAA	gene	translation-rna	+	141868	141949	81
ycf15	gene	other	−	142208	142472	264
ycf2	gene	other	−	142547	149348	6801
trnI-CAU	gene	translation-rna	+	149436	149510	74
rpl23	gene	ribosomal-protein	+	149669	149951	282
rpl2	gene	ribosomal-protein	+	149969	151451	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420935.1DNA · accDMW420935DNA · atpBMW420935DNA · matKMW420935DNA · ndhFMW420935DNA · psbAMW420935DNA · rbcLMW420935DNA · rps12MW420935DNA · ycf1MW420935