Coordinate-aware organelle record

Scutellaria seleriana chloroplast genome

Available MW420962.1 151,744 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	375	1434	1059
trnK-UUU	gene	translation-rna	−	1678	4268	2590
matK	gene	other	−	1969	3514	1545
rps16	gene	ribosomal-protein	−	5179	6307	1128
trnQ-UUC	gene	translation-rna	−	7429	7501	72
psbK	gene	photosystem-ii	+	7819	8005	186
psbI	gene	photosystem-ii	+	8399	8510	111
trnS-GCU	gene	translation-rna	−	8620	8708	88
trnG-UCC	gene	translation-rna	+	9401	10148	747
trnR-UCU	gene	translation-rna	+	10328	10400	72
atpA	gene	atp-synthase	−	10496	12020	1524
atpF	gene	atp-synthase	−	12101	13332	1231
atpH	gene	atp-synthase	−	13692	13938	246
atpI	gene	atp-synthase	−	14927	15671	744
rps2	gene	ribosomal-protein	−	16013	16724	711
rpoC2	gene	rna-polymerase	−	16940	21146	4206
rpoC1	gene	rna-polymerase	−	21291	24121	2830
rpoB	gene	rna-polymerase	−	24147	27360	3213
trnC-GCA	gene	translation-rna	+	28519	28590	71
petN	gene	cytochrome	+	29301	29391	90
psbM	gene	photosystem-ii	−	30404	30518	114
trnD-GUC	gene	translation-rna	−	31044	31118	74
trnY-GUA	gene	translation-rna	−	31231	31315	84
trnE-UUC	gene	translation-rna	−	31374	31447	73
trnT-GGU	gene	translation-rna	+	32010	32082	72
psbD	gene	photosystem-ii	+	33398	34460	1062
psbC	gene	photosystem-ii	+	34407	35829	1422
trnS-UCA	gene	translation-rna	−	36072	36165	93
psbZ	gene	photosystem-ii	+	36484	36673	189
trnG-GCC	gene	translation-rna	+	36921	36992	71
trnfM-CAU	gene	translation-rna	−	37135	37209	74
rps14	gene	ribosomal-protein	−	37358	37661	303
psaB	gene	photosystem-i	−	37788	39993	2205
psaA	gene	photosystem-i	−	40018	42271	2253
ycf3	gene	other	−	42969	44888	1919
trnS-GGA	gene	translation-rna	+	45770	45857	87
rps4	gene	ribosomal-protein	−	46140	46746	606
trnT-UGU	gene	translation-rna	−	47078	47151	73
trnL-UAA	gene	translation-rna	+	47830	48398	568
trnF-GAA	gene	translation-rna	+	48702	48775	73
ndhJ	gene	nad-dehydrogenase	−	49422	49899	477
ndhK	gene	nad-dehydrogenase	−	50006	50684	678
ndhC	gene	nad-dehydrogenase	−	50737	51100	363
trnV-UAC	gene	translation-rna	−	51545	52199	654
trnM-CAU	gene	translation-rna	+	52379	52452	73
atpE	gene	atp-synthase	−	52660	53062	402
atpB	gene	atp-synthase	−	53058	54555	1497
rbcL	gene	other	+	55352	56792	1440
accD	gene	other	+	57515	58994	1479
psaI	gene	photosystem-i	+	59705	59816	111
ycf4	gene	other	+	60249	60804	555
cemA	gene	other	+	61484	62144	660
petA	gene	cytochrome	+	62351	63314	963
psbJ	gene	photosystem-ii	−	64333	64456	123
psbL	gene	photosystem-ii	−	64589	64706	117
psbF	gene	photosystem-ii	−	64729	64849	120
psbE	gene	photosystem-ii	−	64863	65115	252
petL	gene	cytochrome	+	66011	66107	96
petG	gene	cytochrome	+	66282	66396	114
trnW-CCA	gene	translation-rna	−	66514	66588	74
trnP-UGG	gene	translation-rna	−	66757	66831	74
psaJ	gene	photosystem-i	+	67104	67230	126
rpl33	gene	ribosomal-protein	+	67717	67918	201
rps18	gene	ribosomal-protein	+	68092	68398	306
rpl20	gene	ribosomal-protein	−	68634	69021	387
rps12	gene	ribosomal-protein	−	69805	97918	28113
rps12	gene	ribosomal-protein	+	69805	138515	68710
clpP	gene	other	−	70072	72015	1943
psbB	gene	photosystem-ii	+	72477	74004	1527
psbT	gene	photosystem-ii	+	74195	74303	108
psbN	gene	photosystem-ii	−	74363	74495	132
psbH	gene	photosystem-ii	+	74598	74820	222
petB	gene	cytochrome	+	74945	76315	1370
petD	gene	cytochrome	+	76503	77708	1205
rpoA	gene	rna-polymerase	−	77870	78878	1008
rps11	gene	ribosomal-protein	−	78949	79366	417
rpl36	gene	ribosomal-protein	−	79466	79580	114
infA	gene	other	−	79675	79909	234
rps8	gene	ribosomal-protein	−	80024	80435	411
rpl14	gene	ribosomal-protein	−	80602	80971	369
rpl16	gene	ribosomal-protein	−	81082	82327	1245
rps3	gene	ribosomal-protein	−	82481	83144	663
rpl22	gene	ribosomal-protein	−	83145	83601	456
rps19	gene	ribosomal-protein	−	83660	83939	279
rpl2	gene	ribosomal-protein	−	83993	85476	1483
rpl23	gene	ribosomal-protein	−	85494	85776	282
trnI-CAU	gene	translation-rna	−	85935	86009	74
ycf2	gene	other	+	86097	92907	6810
ycf15	gene	other	+	93048	93246	198
trnL-CAA	gene	translation-rna	−	93506	93587	81
ndhB	gene	nad-dehydrogenase	−	94120	96332	2212
rps7	gene	ribosomal-protein	−	96606	97074	468
trnV-GAC	gene	translation-rna	+	99488	99560	72
rrn16	gene	ribosomal-rna	+	99787	101278	1491
trnI-GAU	gene	translation-rna	+	101576	102595	1019
trnA-UGC	gene	translation-rna	+	102660	103543	883
rrn23	gene	ribosomal-rna	+	103712	106525	2813
rrn4.5	gene	ribosomal-rna	+	106623	106726	103
rrn5	gene	ribosomal-rna	+	106973	107094	121
trnR-ACC	gene	translation-rna	+	107328	107402	74
trnN-GUU	gene	translation-rna	+	107958	108030	72
ndhF	gene	nad-dehydrogenase	−	109106	111338	2232
rpl32	gene	ribosomal-protein	+	111840	112017	177
trnL-UAG	gene	translation-rna	+	112452	112532	80
ccsA	gene	other	+	112637	113612	975
ndhD	gene	nad-dehydrogenase	−	113844	115155	1311
psaC	gene	photosystem-i	−	115473	115719	246
ndhE	gene	nad-dehydrogenase	−	115957	116263	306
ndhG	gene	nad-dehydrogenase	−	116484	117015	531
ndhI	gene	nad-dehydrogenase	−	117377	117878	501
ndhA	gene	nad-dehydrogenase	−	117958	120058	2100
ndhH	gene	nad-dehydrogenase	−	120059	121241	1182
rps15	gene	ribosomal-protein	−	121329	121602	273
ycf1	gene	other	−	121889	127283	5394
trnN-GUU	gene	translation-rna	+	127612	127684	72
trnR-ACC	gene	translation-rna	−	128240	128314	74
rrn5	gene	ribosomal-rna	−	128548	128669	121
rrn4.5	gene	ribosomal-rna	−	128916	129019	103
rrn23	gene	ribosomal-rna	−	129117	131930	2813
trnA-UGC	gene	translation-rna	−	132099	132982	883
trnI-GAU	gene	translation-rna	−	133047	134066	1019
rrn16	gene	ribosomal-rna	−	134364	135855	1491
trnV-GAC	gene	translation-rna	−	136082	136154	72
rps7	gene	ribosomal-protein	+	138568	139036	468
ndhB	gene	nad-dehydrogenase	+	139310	141522	2212
trnL-CAA	gene	translation-rna	+	142055	142136	81
ycf15	gene	other	−	142396	142594	198
ycf2	gene	other	−	142735	149545	6810
trnI-CAU	gene	translation-rna	+	149633	149707	74
rpl23	gene	ribosomal-protein	+	149866	150148	282
rpl2	gene	ribosomal-protein	+	150166	151649	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420962.1DNA · accDMW420962DNA · atpBMW420962DNA · matKMW420962DNA · ndhFMW420962DNA · psbAMW420962DNA · rbcLMW420962DNA · rps12MW420962DNA · ycf1MW420962