Coordinate-aware organelle record

Scutellaria splendens chloroplast genome

Available MW420963.1 151,861 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	398	1457	1059
trnK-UUU	gene	translation-rna	−	1701	4290	2589
matK	gene	other	−	1992	3537	1545
rps16	gene	ribosomal-protein	−	5209	6331	1122
trnQ-UUC	gene	translation-rna	−	7464	7536	72
psbK	gene	photosystem-ii	+	7860	8046	186
psbI	gene	photosystem-ii	+	8440	8551	111
trnS-GCU	gene	translation-rna	−	8670	8758	88
trnG-UCC	gene	translation-rna	+	9442	10191	749
trnR-UCU	gene	translation-rna	+	10365	10437	72
atpA	gene	atp-synthase	−	10533	12057	1524
atpF	gene	atp-synthase	−	12140	13371	1231
atpH	gene	atp-synthase	−	13733	13979	246
atpI	gene	atp-synthase	−	14963	15707	744
rps2	gene	ribosomal-protein	−	16048	16759	711
rpoC2	gene	rna-polymerase	−	16975	21181	4206
rpoC1	gene	rna-polymerase	−	21326	24162	2836
rpoB	gene	rna-polymerase	−	24188	27401	3213
trnC-GCA	gene	translation-rna	+	28559	28630	71
petN	gene	cytochrome	+	29342	29432	90
psbM	gene	photosystem-ii	−	30445	30559	114
trnD-GUC	gene	translation-rna	−	31085	31159	74
trnY-GUA	gene	translation-rna	−	31272	31356	84
trnE-UUC	gene	translation-rna	−	31415	31488	73
trnT-GGU	gene	translation-rna	+	32051	32123	72
psbD	gene	photosystem-ii	+	33433	34495	1062
psbC	gene	photosystem-ii	+	34442	35864	1422
trnS-UCA	gene	translation-rna	−	36108	36201	93
psbZ	gene	photosystem-ii	+	36520	36709	189
trnG-GCC	gene	translation-rna	+	36980	37051	71
trnfM-CAU	gene	translation-rna	−	37194	37268	74
rps14	gene	ribosomal-protein	−	37417	37720	303
psaB	gene	photosystem-i	−	37850	40055	2205
psaA	gene	photosystem-i	−	40080	42333	2253
ycf3	gene	other	−	43030	44954	1924
trnS-GGA	gene	translation-rna	+	45844	45931	87
rps4	gene	ribosomal-protein	−	46215	46821	606
trnT-UGU	gene	translation-rna	−	47155	47228	73
trnL-UAA	gene	translation-rna	+	47908	48478	570
trnF-GAA	gene	translation-rna	+	48782	48855	73
ndhJ	gene	nad-dehydrogenase	−	49502	49979	477
ndhK	gene	nad-dehydrogenase	−	50086	50764	678
ndhC	gene	nad-dehydrogenase	−	50817	51180	363
trnV-UAC	gene	translation-rna	−	51636	52290	654
trnM-CAU	gene	translation-rna	+	52470	52543	73
atpE	gene	atp-synthase	−	52751	53153	402
atpB	gene	atp-synthase	−	53149	54646	1497
rbcL	gene	other	+	55413	56853	1440
accD	gene	other	+	57569	59048	1479
psaI	gene	photosystem-i	+	59758	59869	111
ycf4	gene	other	+	60310	60865	555
cemA	gene	other	+	61545	62205	660
petA	gene	cytochrome	+	62411	63374	963
psbJ	gene	photosystem-ii	−	64402	64525	123
psbL	gene	photosystem-ii	−	64658	64775	117
psbF	gene	photosystem-ii	−	64798	64918	120
psbE	gene	photosystem-ii	−	64932	65184	252
petL	gene	cytochrome	+	66091	66187	96
petG	gene	cytochrome	+	66362	66476	114
trnW-CCA	gene	translation-rna	−	66594	66668	74
trnP-UGG	gene	translation-rna	−	66837	66911	74
psaJ	gene	photosystem-i	+	67184	67319	135
rpl33	gene	ribosomal-protein	+	67806	68007	201
rps18	gene	ribosomal-protein	+	68161	68467	306
rpl20	gene	ribosomal-protein	−	68703	69090	387
rps12	gene	ribosomal-protein	−	69864	97997	28133
rps12	gene	ribosomal-protein	+	69864	138632	68768
clpP	gene	other	−	70131	72073	1942
psbB	gene	photosystem-ii	+	72534	74061	1527
psbT	gene	photosystem-ii	+	74252	74360	108
psbN	gene	photosystem-ii	−	74420	74552	132
psbH	gene	photosystem-ii	+	74655	74877	222
petB	gene	cytochrome	+	75002	76370	1368
petD	gene	cytochrome	+	76558	77775	1217
rpoA	gene	rna-polymerase	−	78127	78949	822
rps11	gene	ribosomal-protein	−	79020	79437	417
rpl36	gene	ribosomal-protein	−	79537	79651	114
infA	gene	other	−	79746	79980	234
rps8	gene	ribosomal-protein	−	80096	80507	411
rpl14	gene	ribosomal-protein	−	80666	81035	369
rpl16	gene	ribosomal-protein	−	81146	82405	1259
rps3	gene	ribosomal-protein	−	82559	83222	663
rpl22	gene	ribosomal-protein	−	83248	83680	432
rps19	gene	ribosomal-protein	−	83739	84018	279
rpl2	gene	ribosomal-protein	−	84072	85555	1483
rpl23	gene	ribosomal-protein	−	85573	85855	282
trnI-CAU	gene	translation-rna	−	86014	86088	74
ycf2	gene	other	+	86176	92986	6810
ycf15	gene	other	+	93127	93325	198
trnL-CAA	gene	translation-rna	−	93585	93666	81
ndhB	gene	nad-dehydrogenase	−	94199	96411	2212
rps7	gene	ribosomal-protein	−	96685	97153	468
trnV-GAC	gene	translation-rna	+	99567	99639	72
rrn16	gene	ribosomal-rna	+	99866	101357	1491
trnI-GAU	gene	translation-rna	+	101655	102674	1019
trnA-UGC	gene	translation-rna	+	102739	103627	888
rrn23	gene	ribosomal-rna	+	103796	106609	2813
rrn4.5	gene	ribosomal-rna	+	106707	106810	103
rrn5	gene	ribosomal-rna	+	107057	107178	121
trnR-ACC	gene	translation-rna	+	107412	107486	74
trnN-GUU	gene	translation-rna	+	108042	108114	72
ndhF	gene	nad-dehydrogenase	−	109181	111413	2232
rpl32	gene	ribosomal-protein	+	111930	112107	177
trnL-UAG	gene	translation-rna	+	112541	112621	80
ccsA	gene	other	+	112720	113695	975
ndhD	gene	nad-dehydrogenase	−	113928	115458	1530
psaC	gene	photosystem-i	−	115557	115803	246
ndhE	gene	nad-dehydrogenase	−	116041	116347	306
ndhG	gene	nad-dehydrogenase	−	116568	117099	531
ndhI	gene	nad-dehydrogenase	−	117461	117962	501
ndhA	gene	nad-dehydrogenase	−	118042	120148	2106
ndhH	gene	nad-dehydrogenase	−	120149	121331	1182
rps15	gene	ribosomal-protein	−	121419	121692	273
ycf1	gene	other	−	121980	127404	5424
trnN-GUU	gene	translation-rna	+	127724	127796	72
trnR-ACC	gene	translation-rna	−	128352	128426	74
rrn5	gene	ribosomal-rna	−	128660	128781	121
rrn4.5	gene	ribosomal-rna	−	129028	129131	103
rrn23	gene	ribosomal-rna	−	129229	132042	2813
trnA-UGC	gene	translation-rna	−	132211	133099	888
trnI-GAU	gene	translation-rna	−	133164	134183	1019
rrn16	gene	ribosomal-rna	−	134481	135972	1491
trnV-GAC	gene	translation-rna	−	136199	136271	72
rps7	gene	ribosomal-protein	+	138685	139153	468
ndhB	gene	nad-dehydrogenase	+	139427	141639	2212
trnL-CAA	gene	translation-rna	+	142172	142253	81
ycf15	gene	other	−	142513	142711	198
ycf2	gene	other	−	142852	149662	6810
trnI-CAU	gene	translation-rna	+	149750	149824	74
rpl23	gene	ribosomal-protein	+	149983	150265	282
rpl2	gene	ribosomal-protein	+	150283	151766	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW420963.1DNA · accDMW420963DNA · atpBMW420963DNA · matKMW420963DNA · ndhFMW420963DNA · psbAMW420963DNA · rbcLMW420963DNA · rps12MW420963DNA · ycf1MW420963