Coordinate-aware organelle record

Scutellaria tsinyunensis chloroplast genome

Available NC_050161.1 152,089 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	364	1423	1059
trnK-UUU	gene	translation-rna	−	1675	4263	2588
matK	gene	other	−	1970	3506	1536
rps16	gene	ribosomal-protein	−	5143	6317	1174
trnQ-UUG	gene	translation-rna	−	7335	7407	72
psbK	gene	photosystem-ii	+	7740	7926	186
psbI	gene	photosystem-ii	+	8317	8428	111
trnS-GCU	gene	translation-rna	−	8546	8634	88
trnG-UCC	gene	translation-rna	+	9310	10071	761
trnR-UCU	gene	translation-rna	+	10241	10313	72
atpA	gene	atp-synthase	−	10410	11934	1524
atpF	gene	atp-synthase	−	12016	13244	1228
atpH	gene	atp-synthase	−	13599	13845	246
atpI	gene	atp-synthase	−	14832	15576	744
rps2	gene	ribosomal-protein	−	15924	16635	711
rpoC2	gene	rna-polymerase	−	16851	21057	4206
rpoC1	gene	rna-polymerase	−	21211	24040	2829
rpoB	gene	rna-polymerase	−	24066	27279	3213
trnC-GCA	gene	translation-rna	+	28449	28520	71
petN	gene	cytochrome	+	29237	29327	90
psbM	gene	photosystem-ii	−	30338	30443	105
trnD-GUC	gene	translation-rna	−	30969	31043	74
trnY-GUA	gene	translation-rna	−	31156	31240	84
trnT-GGU	gene	translation-rna	+	31947	32019	72
psbD	gene	photosystem-ii	+	33326	34388	1062
psbC	gene	photosystem-ii	+	34335	35757	1422
trnS-UGA	gene	translation-rna	−	35991	36083	92
psbZ	gene	photosystem-ii	+	36403	36592	189
trnG-GCC	gene	translation-rna	+	36863	36934	71
trnfM-CAU	gene	translation-rna	−	37088	37162	74
rps14	gene	ribosomal-protein	−	37311	37614	303
psaB	gene	photosystem-i	−	37741	39946	2205
psaA	gene	photosystem-i	−	39971	42224	2253
ycf3	gene	other	−	42893	44818	1925
trnS-GGA	gene	translation-rna	+	45702	45789	87
rps4	gene	ribosomal-protein	−	46074	46680	606
trnT-UGU	gene	translation-rna	−	47021	47094	73
trnL-UAA	gene	translation-rna	+	47779	48342	563
trnF-GAA	gene	translation-rna	+	48648	48721	73
ndhJ	gene	nad-dehydrogenase	−	49368	49845	477
ndhK	gene	nad-dehydrogenase	−	49952	50630	678
ndhC	gene	nad-dehydrogenase	−	50682	51045	363
trnV-UAC	gene	translation-rna	−	51899	52552	653
trnM-CAU	gene	translation-rna	+	52732	52805	73
atpE	gene	atp-synthase	−	53020	53422	402
atpB	gene	atp-synthase	−	53418	54906	1488
rbcL	gene	other	+	55676	57119	1443
accD	gene	other	+	57852	59319	1467
psaI	gene	photosystem-i	+	59892	60003	111
ycf4	gene	other	+	60436	60991	555
cemA	gene	other	+	61728	62328	600
petA	gene	cytochrome	+	62534	63497	963
psbJ	gene	photosystem-ii	−	64530	64653	123
psbL	gene	photosystem-ii	−	64786	64903	117
psbF	gene	photosystem-ii	−	64926	65046	120
psbE	gene	photosystem-ii	−	65060	65312	252
petL	gene	cytochrome	+	66220	66316	96
petG	gene	cytochrome	+	66491	66605	114
trnW-CCA	gene	translation-rna	−	66723	66797	74
trnP-UGG	gene	translation-rna	−	66966	67040	74
psaJ	gene	photosystem-i	+	67312	67447	135
rpl33	gene	ribosomal-protein	+	67920	68121	201
rps18	gene	ribosomal-protein	+	68295	68601	306
rpl20	gene	ribosomal-protein	−	68837	69224	387
rps12	gene	ribosomal-protein	−	70003	98134	28131
rps12	gene	ribosomal-protein	+	70003	138856	68853
clpP	gene	other	−	70271	72204	1933
psbB	gene	photosystem-ii	+	72670	74197	1527
psbT	gene	photosystem-ii	+	74388	74490	102
psbN	gene	photosystem-ii	−	74563	74695	132
psbH	gene	photosystem-ii	+	74798	75020	222
petB	gene	cytochrome	+	75144	76512	1368
petD	gene	cytochrome	+	76700	77902	1202
rpoA	gene	rna-polymerase	−	78064	79078	1014
rps11	gene	ribosomal-protein	−	79149	79566	417
rpl36	gene	ribosomal-protein	−	79667	79781	114
infA	gene	other	−	79876	80110	234
rps8	gene	ribosomal-protein	−	80229	80640	411
rpl14	gene	ribosomal-protein	−	80810	81179	369
rpl16	gene	ribosomal-protein	−	81305	82539	1234
rps3	gene	ribosomal-protein	−	82693	83356	663
rpl22	gene	ribosomal-protein	−	83357	83813	456
rps19	gene	ribosomal-protein	−	83872	84151	279
rpl2	gene	ribosomal-protein	−	84205	85688	1483
rpl23	gene	ribosomal-protein	−	85706	85988	282
trnI-CAU	gene	translation-rna	−	86147	86221	74
ycf2	gene	other	+	86309	93119	6810
ycf15	gene	other	+	93260	93458	198
trnL-CAA	gene	translation-rna	−	93713	93794	81
ndhB	gene	nad-dehydrogenase	−	94336	96548	2212
rps7	gene	ribosomal-protein	−	96822	97290	468
trnV-GAC	gene	translation-rna	+	99711	99783	72
rrn16S	gene	ribosomal-rna	+	100000	101491	1491
trnI-GAU	gene	translation-rna	+	101789	102810	1021
trnA-UGC	gene	translation-rna	+	102874	103757	883
rrn23S	gene	ribosomal-rna	+	103926	106730	2804
rrn4.5S	gene	ribosomal-rna	+	106828	106931	103
rrn5S	gene	ribosomal-rna	+	107178	107299	121
trnR-ACG	gene	translation-rna	+	107533	107607	74
trnN-GUU	gene	translation-rna	−	108153	108225	72
ndhF	gene	nad-dehydrogenase	−	109301	111542	2241
rpl32	gene	ribosomal-protein	+	112062	112239	177
trnL-UAG	gene	translation-rna	+	112683	112763	80
ccsA	gene	other	+	112859	113834	975
psaC	gene	photosystem-i	−	115688	115934	246
ndhE	gene	nad-dehydrogenase	−	116190	116496	306
ndhG	gene	nad-dehydrogenase	−	116717	117248	531
ndhI	gene	nad-dehydrogenase	−	117612	118113	501
ndhA	gene	nad-dehydrogenase	−	118193	120286	2093
ndhH	gene	nad-dehydrogenase	−	120287	121469	1182
rps15	gene	ribosomal-protein	−	121571	121844	273
ycf1	gene	other	−	122110	127645	5535
trnN-GUU	gene	translation-rna	+	127974	128046	72
trnR-ACG	gene	translation-rna	−	128592	128666	74
rrn5S	gene	ribosomal-rna	−	128900	129021	121
rrn4.5S	gene	ribosomal-rna	−	129268	129371	103
rrn23S	gene	ribosomal-rna	−	129469	132273	2804
trnA-UGC	gene	translation-rna	−	132442	133325	883
trnI-GAU	gene	translation-rna	−	133389	134410	1021
rrn16S	gene	ribosomal-rna	−	134708	136199	1491
trnV-GAC	gene	translation-rna	−	136416	136488	72
rps7	gene	ribosomal-protein	+	138909	139377	468
ndhB	gene	nad-dehydrogenase	+	139651	141863	2212
trnL-CAA	gene	translation-rna	+	142405	142486	81
ycf15	gene	other	−	142741	142939	198
ycf2	gene	other	−	143080	149890	6810
trnI-CAU	gene	translation-rna	+	149978	150052	74
rpl23	gene	ribosomal-protein	+	150211	150493	282
rpl2	gene	ribosomal-protein	+	150511	151994	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_050161.1DNA · accDNC_050161DNA · atpBNC_050161DNA · matKNC_050161DNA · ndhFNC_050161DNA · psbANC_050161DNA · rbcLNC_050161DNA · rps12NC_050161DNA · ycf1NC_050161